BLASTX nr result
ID: Cnidium21_contig00001523
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00001523 (765 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACF06506.1| RNA polymerase [Elaeis guineensis] 147 2e-33 ref|XP_004149143.1| PREDICTED: probable DNA-directed RNA polymer... 139 5e-31 ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, I... 132 8e-29 ref|NP_001051880.1| Os03g0845700 [Oryza sativa Japonica Group] g... 130 3e-28 gb|EEC76521.1| hypothetical protein OsI_14307 [Oryza sativa Indi... 130 3e-28 >gb|ACF06506.1| RNA polymerase [Elaeis guineensis] Length = 145 Score = 147 bits (371), Expect = 2e-33 Identities = 71/120 (59%), Positives = 94/120 (78%) Frame = +1 Query: 169 SRITARSEELDMSLVLDVNTEIYPIHVGDRFRMILSKSLYPDGSTVTEHNPQDKQKSLAD 348 SRI ARSE+ DM + LDVNTEIYP+HVGD+F M+L+ +L DG+ + + Q ++KSLAD Sbjct: 26 SRIEARSEQFDMYMQLDVNTEIYPLHVGDKFTMVLAPTLSLDGTPDSGYYMQGQRKSLAD 85 Query: 349 KFEYVMHGLLYKMSEDTSDRNPAAEVYISFGGLQMMLKGDPTKIGNYNVDEKLFLLMRRL 528 KFEYVMHG LYK+SE++S N E+Y SFGGL MMLKGDP+ N+ +D++LFLLMR++ Sbjct: 86 KFEYVMHGKLYKISEESSGPNVKVEIYASFGGLLMMLKGDPSNATNFELDQRLFLLMRKV 145 >ref|XP_004149143.1| PREDICTED: probable DNA-directed RNA polymerases I, II, and III subunit RPABC3-like [Cucumis sativus] gi|449509097|ref|XP_004163492.1| PREDICTED: probable DNA-directed RNA polymerases I, II, and III subunit RPABC3-like [Cucumis sativus] Length = 146 Score = 139 bits (351), Expect = 5e-31 Identities = 68/120 (56%), Positives = 89/120 (74%) Frame = +1 Query: 169 SRITARSEELDMSLVLDVNTEIYPIHVGDRFRMILSKSLYPDGSTVTEHNPQDKQKSLAD 348 SRI ARSE+L M ++LDVNTEIYPI G++ M+LS +L DGS VT + Q+ +KSLAD Sbjct: 26 SRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMVLSPTLNYDGSPVTSYKDQEGKKSLAD 85 Query: 349 KFEYVMHGLLYKMSEDTSDRNPAAEVYISFGGLQMMLKGDPTKIGNYNVDEKLFLLMRRL 528 KFEY+MHG YK+S++ S + EVY SFGGLQM+LKGDP + VD+ +FLL+R+L Sbjct: 86 KFEYIMHGKTYKLSDEGSGSDLKVEVYASFGGLQMLLKGDPIHCAKFRVDQNMFLLLRKL 145 >ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit rpabc3 isoform 1 [Vitis vinifera] gi|359478220|ref|XP_003632088.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit rpabc3 isoform 2 [Vitis vinifera] gi|296084252|emb|CBI24640.3| unnamed protein product [Vitis vinifera] Length = 145 Score = 132 bits (332), Expect = 8e-29 Identities = 65/120 (54%), Positives = 88/120 (73%) Frame = +1 Query: 169 SRITARSEELDMSLVLDVNTEIYPIHVGDRFRMILSKSLYPDGSTVTEHNPQDKQKSLAD 348 SRI A+SE+LDM + LDVNTEIYP+H G++F M L+ +L DG+ T + Q +KSLAD Sbjct: 26 SRIEAQSEQLDMYMQLDVNTEIYPMHAGEKFAMSLASTLDLDGTPDTGYYTQAGRKSLAD 85 Query: 349 KFEYVMHGLLYKMSEDTSDRNPAAEVYISFGGLQMMLKGDPTKIGNYNVDEKLFLLMRRL 528 KFEYVMHG LYK+SE+ S N +Y+SFGGL MML GDP ++D+++FLL+R++ Sbjct: 86 KFEYVMHGKLYKISEEGSGPNVKGVIYVSFGGLLMMLSGDPANTAKLDLDQRVFLLIRKV 145 >ref|NP_001051880.1| Os03g0845700 [Oryza sativa Japonica Group] gi|29244685|gb|AAO73277.1| putative RNA polymerase [Oryza sativa Japonica Group] gi|41469638|gb|AAS07361.1| putative RNA polymerase [Oryza sativa Japonica Group] gi|108712076|gb|ABF99871.1| RNA polymerase Rpb8 family protein, expressed [Oryza sativa Japonica Group] gi|108712077|gb|ABF99872.1| RNA polymerase Rpb8 family protein, expressed [Oryza sativa Japonica Group] gi|113550351|dbj|BAF13794.1| Os03g0845700 [Oryza sativa Japonica Group] gi|125588624|gb|EAZ29288.1| hypothetical protein OsJ_13351 [Oryza sativa Japonica Group] gi|215692970|dbj|BAG88390.1| unnamed protein product [Oryza sativa Japonica Group] Length = 148 Score = 130 bits (327), Expect = 3e-28 Identities = 67/123 (54%), Positives = 91/123 (73%), Gaps = 3/123 (2%) Frame = +1 Query: 169 SRITARSEELDMSLVLDVNTEIYPIHVGDRFRMILSKSLYPDGSTVTEHNPQDKQKSLAD 348 SRI ARS++ DM + LDV T++YP+H GDRF M+L +L DG+ + Q +K+LAD Sbjct: 26 SRIEARSDQFDMYMQLDVATDVYPMHPGDRFTMVLVPTLNLDGTPDSAFFTQAGRKTLAD 85 Query: 349 KFEYVMHGLLYKMSE--DTSDRN-PAAEVYISFGGLQMMLKGDPTKIGNYNVDEKLFLLM 519 K+EYVMHG LYK+SE DTSD+N E+Y SFGGL +MLKGDP+ N+ +D++LFLLM Sbjct: 86 KYEYVMHGKLYKISEDKDTSDQNAKKVEMYASFGGLLVMLKGDPSSAANFELDQRLFLLM 145 Query: 520 RRL 528 R++ Sbjct: 146 RKV 148 >gb|EEC76521.1| hypothetical protein OsI_14307 [Oryza sativa Indica Group] Length = 215 Score = 130 bits (327), Expect = 3e-28 Identities = 67/123 (54%), Positives = 91/123 (73%), Gaps = 3/123 (2%) Frame = +1 Query: 169 SRITARSEELDMSLVLDVNTEIYPIHVGDRFRMILSKSLYPDGSTVTEHNPQDKQKSLAD 348 SRI ARS++ DM + LDV T++YP+H GDRF M+L +L DG+ + Q +K+LAD Sbjct: 93 SRIEARSDQFDMYMQLDVATDVYPMHPGDRFTMVLVPTLNLDGTPDSAFFTQAGRKTLAD 152 Query: 349 KFEYVMHGLLYKMSE--DTSDRN-PAAEVYISFGGLQMMLKGDPTKIGNYNVDEKLFLLM 519 K+EYVMHG LYK+SE DTSD+N E+Y SFGGL +MLKGDP+ N+ +D++LFLLM Sbjct: 153 KYEYVMHGKLYKISEDKDTSDQNAKKVEMYASFGGLLVMLKGDPSSAANFELDQRLFLLM 212 Query: 520 RRL 528 R++ Sbjct: 213 RKV 215