BLASTX nr result

ID: Cnidium21_contig00001519 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001519
         (983 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138080.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...    72   2e-10
ref|XP_002890706.1| hypothetical protein ARALYDRAFT_890218 [Arab...    70   1e-09
ref|NP_001240870.1| uncharacterized protein LOC100809850 [Glycin...    69   1e-09
ref|XP_002271937.2| PREDICTED: E3 ubiquitin-protein ligase RGLG2...    69   2e-09
emb|CBI41066.3| unnamed protein product [Vitis vinifera]               69   2e-09

>ref|XP_004138080.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Cucumis sativus]
           gi|449525732|ref|XP_004169870.1| PREDICTED: E3
           ubiquitin-protein ligase RGLG2-like [Cucumis sativus]
          Length = 432

 Score = 72.4 bits (176), Expect = 2e-10
 Identities = 36/55 (65%), Positives = 42/55 (76%), Gaps = 2/55 (3%)
 Frame = +1

Query: 508 EAINCCSKYPVSIILVGFGDGPWDMMVQFDDNIPSGALDNFQL--FIGSLLQHID 666
           EAI   SKYP+SIILVG GDGPWDMM +FDDNIP+ A DNFQ   F   +L++ID
Sbjct: 247 EAIVKASKYPLSIILVGVGDGPWDMMREFDDNIPARAFDNFQFVNFTNIMLKNID 301


>ref|XP_002890706.1| hypothetical protein ARALYDRAFT_890218 [Arabidopsis lyrata subsp.
           lyrata] gi|297336548|gb|EFH66965.1| hypothetical protein
           ARALYDRAFT_890218 [Arabidopsis lyrata subsp. lyrata]
          Length = 421

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 34/57 (59%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
 Frame = +1

Query: 508 EAINCCSKYPVSIILVGFGDGPWDMMVQFDDNIPSGALDNFQL--FIGSLLQHIDPG 672
           +AI   S YP+SI+LVG GDGPWD M QFDDNIP+ A DNFQ   F   + ++IDPG
Sbjct: 243 DAIVRASAYPLSIVLVGVGDGPWDTMRQFDDNIPARAFDNFQFVNFTEIMAKNIDPG 299


>ref|NP_001240870.1| uncharacterized protein LOC100809850 [Glycine max]
           gi|255644673|gb|ACU22839.1| unknown [Glycine max]
          Length = 427

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 32/42 (76%), Positives = 35/42 (83%)
 Frame = +1

Query: 508 EAINCCSKYPVSIILVGFGDGPWDMMVQFDDNIPSGALDNFQ 633
           EAI   S+YP+SIILVG GDGPWDMM QFDDNIP+ A DNFQ
Sbjct: 241 EAIVKASEYPLSIILVGVGDGPWDMMKQFDDNIPARAFDNFQ 282


>ref|XP_002271937.2| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Vitis vinifera]
          Length = 420

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 33/62 (53%), Positives = 41/62 (66%)
 Frame = +1

Query: 448 IKNSKDHCYAREWKYRLSVAEAINCCSKYPVSIILVGFGDGPWDMMVQFDDNIPSGALDN 627
           +  S D  Y +  +   +   AI   S+YP+SI+LVG GDGPWD+M QFDDNIPS A DN
Sbjct: 210 VTRSVDTHYGQLSRQEQNTINAIVKASEYPLSIVLVGVGDGPWDVMQQFDDNIPSRAFDN 269

Query: 628 FQ 633
           FQ
Sbjct: 270 FQ 271


>emb|CBI41066.3| unnamed protein product [Vitis vinifera]
          Length = 415

 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 33/62 (53%), Positives = 41/62 (66%)
 Frame = +1

Query: 448 IKNSKDHCYAREWKYRLSVAEAINCCSKYPVSIILVGFGDGPWDMMVQFDDNIPSGALDN 627
           +  S D  Y +  +   +   AI   S+YP+SI+LVG GDGPWD+M QFDDNIPS A DN
Sbjct: 210 VTRSVDTHYGQLSRQEQNTINAIVKASEYPLSIVLVGVGDGPWDVMQQFDDNIPSRAFDN 269

Query: 628 FQ 633
           FQ
Sbjct: 270 FQ 271


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