BLASTX nr result

ID: Cnidium21_contig00001469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001469
         (686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79822.1|AC026875_2 T6D22.2 [Arabidopsis thaliana]               293   2e-77
ref|XP_002892424.1| T6D22.2 [Arabidopsis lyrata subsp. lyrata] g...   288   9e-76
ref|XP_003553292.1| PREDICTED: elongation factor 1-alpha-like is...   283   2e-74
ref|XP_003524723.1| PREDICTED: elongation factor 1-alpha-like [G...   283   3e-74
gb|ABA12222.1| translation elongation factor 1A-6 [Gossypium hir...   282   4e-74

>gb|AAF79822.1|AC026875_2 T6D22.2 [Arabidopsis thaliana]
          Length = 967

 Score =  293 bits (750), Expect = 2e-77
 Identities = 158/224 (70%), Positives = 170/224 (75%)
 Frame = +1

Query: 1   LPGDNVGFNVKNVSVKDIKRGNVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLD 180
           LPGDNVGFNVKNV+VKD+KRG VASNSKDDPAK AANFTSQVIIMNHPGQIGNGYAPVLD
Sbjct: 291 LPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLD 350

Query: 181 CHTSHIAVKFSELLTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFMSYPPLG 360
           CHTSHIAVKFSE+LTKIDRRSGKE+EKEPKFLKNGDAGMVKM PTKPMVVETF  YPPLG
Sbjct: 351 CHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLG 410

Query: 361 RFAVRDMRQTVAVGVIKSVEKKEPTGXXXXXXXXXXXXXVQDVPSSIISSGGCYHMSNKG 540
           RFAVRDMRQTVAVGVIKSV+KK+PTG                V  + +  G      +K 
Sbjct: 411 RFAVRDMRQTVAVGVIKSVDKKDPTG--------------AKVTKAAVKKG-----ESKD 451

Query: 541 LVSVFSVVTCLVCRSVCFCLGLCSVVVPSTGTWSEHWVLDRRWR 672
            VS  ++V  LV      CL  C V  PS    S +WVLDRRWR
Sbjct: 452 SVSFITIVWYLVA-----CLCSCFVFSPSE-RCSRNWVLDRRWR 489



 Score =  277 bits (708), Expect = 2e-72
 Identities = 135/146 (92%), Positives = 141/146 (96%)
 Frame = +1

Query: 1    LPGDNVGFNVKNVSVKDIKRGNVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLD 180
            LPGDNVGFNVKNV+VKD+KRG VASNSKDDPAK AANFTSQVIIMNHPGQIGNGYAPVLD
Sbjct: 809  LPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLD 868

Query: 181  CHTSHIAVKFSELLTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFMSYPPLG 360
            CHTSHIAVKFSE+LTKIDRRSGKE+EKEPKFLKNGDAGMVKM PTKPMVVETF  YPPLG
Sbjct: 869  CHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLG 928

Query: 361  RFAVRDMRQTVAVGVIKSVEKKEPTG 438
            RFAVRDMRQTVAVGVIKSV+KK+PTG
Sbjct: 929  RFAVRDMRQTVAVGVIKSVDKKDPTG 954


>ref|XP_002892424.1| T6D22.2 [Arabidopsis lyrata subsp. lyrata]
           gi|297338266|gb|EFH68683.1| T6D22.2 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 951

 Score =  288 bits (736), Expect = 9e-76
 Identities = 156/221 (70%), Positives = 169/221 (76%)
 Frame = +1

Query: 1   LPGDNVGFNVKNVSVKDIKRGNVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLD 180
           LPGDNVGFNVKNV+VKD+KRG VASNSKDDPAK AANFTSQVIIMNHPGQIGNGYAPVLD
Sbjct: 291 LPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLD 350

Query: 181 CHTSHIAVKFSELLTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFMSYPPLG 360
           CHTSHIAVKFSE+LTKIDRRSGKE+EKEPKFLKNGDAGMVKM PTKPMVVETF  YPPLG
Sbjct: 351 CHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLG 410

Query: 361 RFAVRDMRQTVAVGVIKSVEKKEPTGXXXXXXXXXXXXXVQDVPSSIISSGGCYHMSNKG 540
           RFAVRDMRQTVAVGVIKSV+KK+PTG                V  + +  G      +K 
Sbjct: 411 RFAVRDMRQTVAVGVIKSVDKKDPTG--------------AKVTKAAVKKG-----ESKD 451

Query: 541 LVSVFSVVTCLVCRSVCFCLGLCSVVVPSTGTWSEHWVLDR 663
            VS F++V  LV      CL  C V+ PS    S +WVLDR
Sbjct: 452 NVSFFTLVWYLVA-----CLCSCFVISPSE-RCSRNWVLDR 486



 Score =  277 bits (708), Expect = 2e-72
 Identities = 135/146 (92%), Positives = 141/146 (96%)
 Frame = +1

Query: 1    LPGDNVGFNVKNVSVKDIKRGNVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLD 180
            LPGDNVGFNVKNV+VKD+KRG VASNSKDDPAK AANFTSQVIIMNHPGQIGNGYAPVLD
Sbjct: 793  LPGDNVGFNVKNVAVKDLKRGYVASNSKDDPAKGAANFTSQVIIMNHPGQIGNGYAPVLD 852

Query: 181  CHTSHIAVKFSELLTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFMSYPPLG 360
            CHTSHIAVKFSE+LTKIDRRSGKE+EKEPKFLKNGDAGMVKM PTKPMVVETF  YPPLG
Sbjct: 853  CHTSHIAVKFSEILTKIDRRSGKEIEKEPKFLKNGDAGMVKMTPTKPMVVETFSEYPPLG 912

Query: 361  RFAVRDMRQTVAVGVIKSVEKKEPTG 438
            RFAVRDMRQTVAVGVIKSV+KK+PTG
Sbjct: 913  RFAVRDMRQTVAVGVIKSVDKKDPTG 938


>ref|XP_003553292.1| PREDICTED: elongation factor 1-alpha-like isoform 1 [Glycine max]
           gi|356570231|ref|XP_003553293.1| PREDICTED: elongation
           factor 1-alpha-like isoform 2 [Glycine max]
          Length = 447

 Score =  283 bits (724), Expect = 2e-74
 Identities = 139/146 (95%), Positives = 143/146 (97%)
 Frame = +1

Query: 1   LPGDNVGFNVKNVSVKDIKRGNVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLD 180
           LPGDNVGFNVKNV+VKD+KRG VASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLD
Sbjct: 291 LPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLD 350

Query: 181 CHTSHIAVKFSELLTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFMSYPPLG 360
           CHTSHIAVKFSE+LTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETF  YPPLG
Sbjct: 351 CHTSHIAVKFSEILTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLG 410

Query: 361 RFAVRDMRQTVAVGVIKSVEKKEPTG 438
           RFAVRDMRQTVAVGVIKSVEKK+PTG
Sbjct: 411 RFAVRDMRQTVAVGVIKSVEKKDPTG 436


>ref|XP_003524723.1| PREDICTED: elongation factor 1-alpha-like [Glycine max]
          Length = 429

 Score =  283 bits (723), Expect = 3e-74
 Identities = 138/146 (94%), Positives = 143/146 (97%)
 Frame = +1

Query: 1   LPGDNVGFNVKNVSVKDIKRGNVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLD 180
           LPGDNVGFNVKNV+VKD+KRG VASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLD
Sbjct: 273 LPGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLD 332

Query: 181 CHTSHIAVKFSELLTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFMSYPPLG 360
           CHTSHIAVKFSE+LTKIDRRSGKELEKEPKFLKNGDAGMVKM+PTKPMVVETF  YPPLG
Sbjct: 333 CHTSHIAVKFSEILTKIDRRSGKELEKEPKFLKNGDAGMVKMVPTKPMVVETFSEYPPLG 392

Query: 361 RFAVRDMRQTVAVGVIKSVEKKEPTG 438
           RFAVRDMRQTVAVGVIKSVEKK+PTG
Sbjct: 393 RFAVRDMRQTVAVGVIKSVEKKDPTG 418


>gb|ABA12222.1| translation elongation factor 1A-6 [Gossypium hirsutum]
          Length = 447

 Score =  282 bits (722), Expect = 4e-74
 Identities = 139/145 (95%), Positives = 142/145 (97%)
 Frame = +1

Query: 4   PGDNVGFNVKNVSVKDIKRGNVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDC 183
           PGDNVGFNVKNV+VKD+KRG VASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDC
Sbjct: 292 PGDNVGFNVKNVAVKDLKRGFVASNSKDDPAKEAANFTSQVIIMNHPGQIGNGYAPVLDC 351

Query: 184 HTSHIAVKFSELLTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFMSYPPLGR 363
           HTSHIAVKFSELLTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETF  YPPLGR
Sbjct: 352 HTSHIAVKFSELLTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFSEYPPLGR 411

Query: 364 FAVRDMRQTVAVGVIKSVEKKEPTG 438
           FAVRDMRQTVAVGVIKSVEKK+PTG
Sbjct: 412 FAVRDMRQTVAVGVIKSVEKKDPTG 436


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