BLASTX nr result

ID: Cnidium21_contig00001453 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001453
         (533 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160482.1| PREDICTED: RNA-binding protein 39-like [Cucu...   223   2e-56
ref|XP_004141977.1| PREDICTED: RNA-binding protein 39-like [Cucu...   223   2e-56
emb|CBI21551.3| unnamed protein product [Vitis vinifera]              219   2e-55
ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Viti...   219   2e-55
ref|XP_002310314.1| predicted protein [Populus trichocarpa] gi|2...   213   1e-53

>ref|XP_004160482.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
          Length = 598

 Score =  223 bits (567), Expect = 2e-56
 Identities = 122/186 (65%), Positives = 138/186 (74%), Gaps = 10/186 (5%)
 Frame = +1

Query: 1   FLQLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQETXXXXXXXXXXXXXXXXLNAQSR 180
           F  LEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQE+                LNAQSR
Sbjct: 379 FAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKSNDLDDDEGGGLALNAQSR 438

Query: 181 ALLMQKLDRGGTATSFAGT--PVVVNGSAPVQQFMSVPING---AALPMLPL-----VAE 330
           ALLMQKLDR G ATS AG+    V+NGSAP Q+  S+P+NG    A P+LP      V +
Sbjct: 439 ALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVNGQAAVAAPVLPANFTPPVLQ 498

Query: 331 PIGTPSECLLLKNMFDPATEEDPEFDMDIKEDVHEECSNYGHVKHIHVDKNSAGYVYLRF 510
            +G+PSECLLLKNMFDP+TE  P+FDM+IKEDV EECS YG VKHI+VDKNSAG VYL++
Sbjct: 499 SVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGRVKHIYVDKNSAGCVYLQY 558

Query: 511 DTVEGA 528
           DTVE A
Sbjct: 559 DTVEAA 564


>ref|XP_004141977.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
          Length = 598

 Score =  223 bits (567), Expect = 2e-56
 Identities = 122/186 (65%), Positives = 138/186 (74%), Gaps = 10/186 (5%)
 Frame = +1

Query: 1   FLQLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQETXXXXXXXXXXXXXXXXLNAQSR 180
           F  LEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQE+                LNAQSR
Sbjct: 379 FAHLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQESVAKSNDLDDDEGGGLALNAQSR 438

Query: 181 ALLMQKLDRGGTATSFAGT--PVVVNGSAPVQQFMSVPING---AALPMLPL-----VAE 330
           ALLMQKLDR G ATS AG+    V+NGSAP Q+  S+P+NG    A P+LP      V +
Sbjct: 439 ALLMQKLDRTGIATSIAGSLGAPVLNGSAPNQRSTSLPVNGQAAVAAPVLPANFTPPVLQ 498

Query: 331 PIGTPSECLLLKNMFDPATEEDPEFDMDIKEDVHEECSNYGHVKHIHVDKNSAGYVYLRF 510
            +G+PSECLLLKNMFDP+TE  P+FDM+IKEDV EECS YG VKHI+VDKNSAG VYL++
Sbjct: 499 SVGSPSECLLLKNMFDPSTETAPDFDMEIKEDVEEECSKYGRVKHIYVDKNSAGCVYLQY 558

Query: 511 DTVEGA 528
           DTVE A
Sbjct: 559 DTVEAA 564


>emb|CBI21551.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  219 bits (558), Expect = 2e-55
 Identities = 119/187 (63%), Positives = 139/187 (74%), Gaps = 11/187 (5%)
 Frame = +1

Query: 1   FLQLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQETXXXXXXXXXXXXXXXXLNAQSR 180
           F +LEHAKAAQ+LNGKL+IAGR IKVSSVTDHIG Q+                 LNAQSR
Sbjct: 283 FAELEHAKAAQNLNGKLDIAGRIIKVSSVTDHIGVQDAGAKAADFDDDDGGGLSLNAQSR 342

Query: 181 ALLMQKLDRGGTATSFAGTPVV--VNGSAPVQQFMSVPINGAAL---PMLPL------VA 327
           ALLMQKLDR G A+S AG+  V  +NGSAP QQ +S+ ING A    P LP        +
Sbjct: 343 ALLMQKLDRTGIASSIAGSLGVPMLNGSAPNQQAISLSINGQAAVSAPALPTQVVTSPAS 402

Query: 328 EPIGTPSECLLLKNMFDPATEEDPEFDMDIKEDVHEECSNYGHVKHIHVDKNSAGYVYLR 507
           EP+GTP+ECLLLKNMFDPATE DP+FD+DIKE+V EECSN+G VKHI+V+K+SAGYVYLR
Sbjct: 403 EPVGTPTECLLLKNMFDPATEIDPDFDLDIKEEVQEECSNFGRVKHIYVEKHSAGYVYLR 462

Query: 508 FDTVEGA 528
           F+TVE A
Sbjct: 463 FETVEAA 469


>ref|XP_002278030.1| PREDICTED: RNA-binding protein 39-like [Vitis vinifera]
          Length = 542

 Score =  219 bits (558), Expect = 2e-55
 Identities = 119/187 (63%), Positives = 139/187 (74%), Gaps = 11/187 (5%)
 Frame = +1

Query: 1   FLQLEHAKAAQSLNGKLEIAGRTIKVSSVTDHIGAQETXXXXXXXXXXXXXXXXLNAQSR 180
           F +LEHAKAAQ+LNGKL+IAGR IKVSSVTDHIG Q+                 LNAQSR
Sbjct: 321 FAELEHAKAAQNLNGKLDIAGRIIKVSSVTDHIGVQDAGAKAADFDDDDGGGLSLNAQSR 380

Query: 181 ALLMQKLDRGGTATSFAGTPVV--VNGSAPVQQFMSVPINGAAL---PMLPL------VA 327
           ALLMQKLDR G A+S AG+  V  +NGSAP QQ +S+ ING A    P LP        +
Sbjct: 381 ALLMQKLDRTGIASSIAGSLGVPMLNGSAPNQQAISLSINGQAAVSAPALPTQVVTSPAS 440

Query: 328 EPIGTPSECLLLKNMFDPATEEDPEFDMDIKEDVHEECSNYGHVKHIHVDKNSAGYVYLR 507
           EP+GTP+ECLLLKNMFDPATE DP+FD+DIKE+V EECSN+G VKHI+V+K+SAGYVYLR
Sbjct: 441 EPVGTPTECLLLKNMFDPATEIDPDFDLDIKEEVQEECSNFGRVKHIYVEKHSAGYVYLR 500

Query: 508 FDTVEGA 528
           F+TVE A
Sbjct: 501 FETVEAA 507


>ref|XP_002310314.1| predicted protein [Populus trichocarpa] gi|222853217|gb|EEE90764.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score =  213 bits (543), Expect = 1e-53
 Identities = 122/189 (64%), Positives = 140/189 (74%), Gaps = 12/189 (6%)
 Frame = +1

Query: 1   FLQLEHAKAAQS-LNGKLEIAGRTIKVSSVTDHIGAQETXXXXXXXXXXXXXXXXLNAQS 177
           F QLE+AKAAQS LNGKLEIAGRTIKVSSVT+H G Q++                LNAQS
Sbjct: 172 FTQLENAKAAQSALNGKLEIAGRTIKVSSVTEHGGQQDSGVKSADFDDDDGGGLALNAQS 231

Query: 178 RALLMQKLDRGGTATSFAGTPVV--VNGSAPVQQFMSVPING------AALPMLPLVA-- 327
           RALLMQKLDR GTATS AG+  V  +NGSAP QQ +S+P+NG      AA P L L +  
Sbjct: 232 RALLMQKLDRTGTATSIAGSLGVPLLNGSAPNQQAISLPVNGQTNIGAAAFPALVLPSPA 291

Query: 328 -EPIGTPSECLLLKNMFDPATEEDPEFDMDIKEDVHEECSNYGHVKHIHVDKNSAGYVYL 504
            E IG PSECLLLKNMFDPATE +P+FD+DIKEDV EECS YG VKHI VDKNSAG+VYL
Sbjct: 292 YESIGQPSECLLLKNMFDPATETEPDFDLDIKEDVEEECSRYGQVKHIWVDKNSAGHVYL 351

Query: 505 RFDTVEGAS 531
           +FD++E A+
Sbjct: 352 QFDSMEAAA 360


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