BLASTX nr result

ID: Cnidium21_contig00001451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001451
         (866 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002867251.1| ATP synthase family [Arabidopsis lyrata subs...   170   3e-40
ref|NP_194953.1| F-type H+-transporting ATPase subunit b [Arabid...   168   1e-39
sp|P31853.2|ATPX_SPIOL RecName: Full=ATP synthase subunit b', ch...   168   2e-39
gb|AAK68813.1| H+-transporting ATP synthase-like protein [Arabid...   165   1e-38
ref|XP_002324301.1| predicted protein [Populus trichocarpa] gi|2...   163   4e-38

>ref|XP_002867251.1| ATP synthase family [Arabidopsis lyrata subsp. lyrata]
           gi|297313087|gb|EFH43510.1| ATP synthase family
           [Arabidopsis lyrata subsp. lyrata]
          Length = 219

 Score =  170 bits (431), Expect = 3e-40
 Identities = 91/147 (61%), Positives = 108/147 (73%)
 Frame = +3

Query: 186 AEEFEKAQLFDFDLTLPIMMVQFLALMFALDKVYYTPLGNFMDARDKEIKAMLSDVKDTS 365
           AE  EKAQLFDF+LTLPI++V+FL LMFALDKVYY+PLGNFMD RD  IK  L+ VKDTS
Sbjct: 73  AEAMEKAQLFDFNLTLPIIVVEFLFLMFALDKVYYSPLGNFMDQRDASIKEKLASVKDTS 132

Query: 366 AEVKELEEQXXXXXXXXXXXXXXXLNQMKKETAVEVEKQIAQGRKKVXXXXXXXXXXXXK 545
           AEVKEL+E+               LN+MKKET VEVE+++A+GRKKV            K
Sbjct: 133 AEVKELDEKAAAVMRAARAEIAAALNKMKKETQVEVEEKLAEGRKKVEEELKEALASLEK 192

Query: 546 SKEETIKSLDSQIAQLSDEIVKKVLPA 626
            KEETIK+LDSQIA LS++IVKKVLP+
Sbjct: 193 QKEETIKALDSQIAALSEDIVKKVLPS 219


>ref|NP_194953.1| F-type H+-transporting ATPase subunit b [Arabidopsis thaliana]
           gi|2864617|emb|CAA16964.1| H+-transporting ATP synthase
           chain9 - like protein [Arabidopsis thaliana]
           gi|5730141|emb|CAB52473.1| ATP synthase beta chain
           precursor (subunit II) [Arabidopsis thaliana]
           gi|7270130|emb|CAB79944.1| H+-transporting ATP synthase
           chain 9-like protein [Arabidopsis thaliana]
           gi|16604406|gb|AAL24209.1| AT4g32260/F10M6_100
           [Arabidopsis thaliana] gi|21554175|gb|AAM63254.1|
           H+-transporting ATP synthase chain 9-like protein
           [Arabidopsis thaliana] gi|332660627|gb|AEE86027.1|
           F-type H+-transporting ATPase subunit b [Arabidopsis
           thaliana]
          Length = 219

 Score =  168 bits (426), Expect = 1e-39
 Identities = 90/147 (61%), Positives = 106/147 (72%)
 Frame = +3

Query: 186 AEEFEKAQLFDFDLTLPIMMVQFLALMFALDKVYYTPLGNFMDARDKEIKAMLSDVKDTS 365
           AE  EKAQLFDF+LTLPI++V+FL LMFALDKVYY+PLGNFMD RD  IK  L+ VKDTS
Sbjct: 73  AEAMEKAQLFDFNLTLPIIVVEFLFLMFALDKVYYSPLGNFMDQRDASIKEKLASVKDTS 132

Query: 366 AEVKELEEQXXXXXXXXXXXXXXXLNQMKKETAVEVEKQIAQGRKKVXXXXXXXXXXXXK 545
            EVKEL+EQ               LN+MKKET VEVE+++A+GRKKV             
Sbjct: 133 TEVKELDEQAAAVMRAARAEIAAALNKMKKETQVEVEEKLAEGRKKVEEELKEALASLES 192

Query: 546 SKEETIKSLDSQIAQLSDEIVKKVLPA 626
            KEETIK+LDSQIA LS++IVKKVLP+
Sbjct: 193 QKEETIKALDSQIAALSEDIVKKVLPS 219


>sp|P31853.2|ATPX_SPIOL RecName: Full=ATP synthase subunit b', chloroplastic; AltName:
           Full=ATP synthase F(0) sector subunit b'; AltName:
           Full=ATPase subunit II; Flags: Precursor
           gi|394755|emb|CAA50520.1| CF(o)II ATP synthase subunit 9
           [Spinacia oleracea]
          Length = 222

 Score =  168 bits (425), Expect = 2e-39
 Identities = 88/148 (59%), Positives = 106/148 (71%)
 Frame = +3

Query: 186 AEEFEKAQLFDFDLTLPIMMVQFLALMFALDKVYYTPLGNFMDARDKEIKAMLSDVKDTS 365
           AEE EKA LFDF+LTLPI+M +FL LMFALDK+YYTPLG+FMD RD  IK  LS VKDTS
Sbjct: 75  AEEIEKASLFDFNLTLPIIMAEFLFLMFALDKIYYTPLGDFMDKRDASIKEQLSGVKDTS 134

Query: 366 AEVKELEEQXXXXXXXXXXXXXXXLNQMKKETAVEVEKQIAQGRKKVXXXXXXXXXXXXK 545
           +EVK+LEEQ               LN+MKKET +EVE ++A+GRKK+            +
Sbjct: 135 SEVKQLEEQANAVMRAARAEISAALNKMKKETQLEVEAKLAEGRKKIEVELQEALGSLEQ 194

Query: 546 SKEETIKSLDSQIAQLSDEIVKKVLPAA 629
            KE+TIKSLDSQI+ LSD+IVKKVLP +
Sbjct: 195 QKEDTIKSLDSQISALSDDIVKKVLPVS 222


>gb|AAK68813.1| H+-transporting ATP synthase-like protein [Arabidopsis thaliana]
           gi|18377522|gb|AAL66927.1| H+-transporting ATP
           synthase-like protein [Arabidopsis thaliana]
          Length = 219

 Score =  165 bits (418), Expect = 1e-38
 Identities = 89/147 (60%), Positives = 105/147 (71%)
 Frame = +3

Query: 186 AEEFEKAQLFDFDLTLPIMMVQFLALMFALDKVYYTPLGNFMDARDKEIKAMLSDVKDTS 365
           AE  EKAQLFDF+LTLPI++V+FL LMFALDKVYY+ LGNFMD RD  IK  L+ VKDTS
Sbjct: 73  AEAMEKAQLFDFNLTLPIIVVEFLFLMFALDKVYYSQLGNFMDQRDASIKEKLASVKDTS 132

Query: 366 AEVKELEEQXXXXXXXXXXXXXXXLNQMKKETAVEVEKQIAQGRKKVXXXXXXXXXXXXK 545
            EVKEL+EQ               LN+MKKET VEVE+++A+GRKKV             
Sbjct: 133 TEVKELDEQAAAVMRAARAEIAAALNKMKKETQVEVEEKLAEGRKKVEEELKEALASLES 192

Query: 546 SKEETIKSLDSQIAQLSDEIVKKVLPA 626
            KEETIK+LDSQIA LS++IVKKVLP+
Sbjct: 193 QKEETIKALDSQIAALSEDIVKKVLPS 219


>ref|XP_002324301.1| predicted protein [Populus trichocarpa] gi|222865735|gb|EEF02866.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score =  163 bits (413), Expect = 4e-38
 Identities = 88/146 (60%), Positives = 103/146 (70%)
 Frame = +3

Query: 186 AEEFEKAQLFDFDLTLPIMMVQFLALMFALDKVYYTPLGNFMDARDKEIKAMLSDVKDTS 365
           AEE EKA LFDF+LTLPI+MV+FL LM ALDK++++PLGNFMD RD  IK  LS VKDTS
Sbjct: 20  AEEIEKAALFDFNLTLPIIMVEFLVLMVALDKIWFSPLGNFMDERDAAIKEKLSSVKDTS 79

Query: 366 AEVKELEEQXXXXXXXXXXXXXXXLNQMKKETAVEVEKQIAQGRKKVXXXXXXXXXXXXK 545
            EVK+LEEQ               LN+MKKET  EVE+++A+GRKK+             
Sbjct: 80  EEVKQLEEQAAAVMRAARAEISAALNKMKKETQGEVEQKLAEGRKKIEAELQEALAKLDT 139

Query: 546 SKEETIKSLDSQIAQLSDEIVKKVLP 623
            KEETIK+LDSQIA LSDEIVKKVLP
Sbjct: 140 QKEETIKALDSQIAALSDEIVKKVLP 165


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