BLASTX nr result

ID: Cnidium21_contig00001405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001405
         (1006 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002864707.1| hypothetical protein ARALYDRAFT_919322 [Arab...    72   3e-10
gb|AAG50930.1|AC079284_5 unknown protein [Arabidopsis thaliana]        71   4e-10
ref|NP_564580.1| Ankyrin repeat family protein [Arabidopsis thal...    71   4e-10
gb|AFK46964.1| unknown [Lotus japonicus]                               67   7e-09
ref|XP_003598690.1| hypothetical protein MTR_3g019320 [Medicago ...    66   2e-08

>ref|XP_002864707.1| hypothetical protein ARALYDRAFT_919322 [Arabidopsis lyrata subsp.
           lyrata] gi|297310542|gb|EFH40966.1| hypothetical protein
           ARALYDRAFT_919322 [Arabidopsis lyrata subsp. lyrata]
          Length = 177

 Score = 71.6 bits (174), Expect = 3e-10
 Identities = 35/64 (54%), Positives = 41/64 (64%)
 Frame = +1

Query: 694 SVIKSKFVGTXXXXXXXXXXXXXXXRPSGATCRFKFGKNGVDAEQAGIYATQSRDDFDRD 873
           +++ S+F+GT                 S  TC FKFGKNGVDAE AGIY +QSRDDFDRD
Sbjct: 29  TLLSSRFLGTRNLKLQIRPARLGPSNGSRTTCWFKFGKNGVDAENAGIYGSQSRDDFDRD 88

Query: 874 DVEQ 885
           DVEQ
Sbjct: 89  DVEQ 92


>gb|AAG50930.1|AC079284_5 unknown protein [Arabidopsis thaliana]
          Length = 257

 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 35/63 (55%), Positives = 40/63 (63%)
 Frame = +1

Query: 697 VIKSKFVGTXXXXXXXXXXXXXXXRPSGATCRFKFGKNGVDAEQAGIYATQSRDDFDRDD 876
           ++ S+F+GT                 S  TC FKFGKNGVDAE AGIY +QSRDDFDRDD
Sbjct: 110 LLSSRFLGTRNLKLRIRPARLGPSNGSRTTCWFKFGKNGVDAENAGIYGSQSRDDFDRDD 169

Query: 877 VEQ 885
           VEQ
Sbjct: 170 VEQ 172


>ref|NP_564580.1| Ankyrin repeat family protein [Arabidopsis thaliana]
           gi|75248476|sp|Q8VY88.1|LTD_ARATH RecName: Full=Protein
           LHCP TRANSLOCATION DEFECT; AltName: Full=Protein
           GRANA-DEFICIENT CHLOROPLAST 1; Flags: Precursor
           gi|18252245|gb|AAL61955.1| unknown protein [Arabidopsis
           thaliana] gi|21386977|gb|AAM47892.1| unknown protein
           [Arabidopsis thaliana] gi|21553984|gb|AAM63065.1|
           unknown [Arabidopsis thaliana]
           gi|332194478|gb|AEE32599.1| Ankyrin repeat family
           protein [Arabidopsis thaliana]
          Length = 175

 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 35/63 (55%), Positives = 40/63 (63%)
 Frame = +1

Query: 697 VIKSKFVGTXXXXXXXXXXXXXXXRPSGATCRFKFGKNGVDAEQAGIYATQSRDDFDRDD 876
           ++ S+F+GT                 S  TC FKFGKNGVDAE AGIY +QSRDDFDRDD
Sbjct: 28  LLSSRFLGTRNLKLRIRPARLGPSNGSRTTCWFKFGKNGVDAENAGIYGSQSRDDFDRDD 87

Query: 877 VEQ 885
           VEQ
Sbjct: 88  VEQ 90


>gb|AFK46964.1| unknown [Lotus japonicus]
          Length = 175

 Score = 67.0 bits (162), Expect = 7e-09
 Identities = 31/37 (83%), Positives = 33/37 (89%)
 Frame = +1

Query: 775 SGATCRFKFGKNGVDAEQAGIYATQSRDDFDRDDVEQ 885
           S ATC F+FGKNGVDAE AGIY +QSRDDFDRDDVEQ
Sbjct: 55  SKATCWFRFGKNGVDAEGAGIYGSQSRDDFDRDDVEQ 91


>ref|XP_003598690.1| hypothetical protein MTR_3g019320 [Medicago truncatula]
           gi|355487738|gb|AES68941.1| hypothetical protein
           MTR_3g019320 [Medicago truncatula]
           gi|388518635|gb|AFK47379.1| unknown [Medicago
           truncatula]
          Length = 179

 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 30/34 (88%), Positives = 31/34 (91%)
 Frame = +1

Query: 784 TCRFKFGKNGVDAEQAGIYATQSRDDFDRDDVEQ 885
           TC FKFGKNGVDAE AGIY +QSRDDFDRDDVEQ
Sbjct: 62  TCWFKFGKNGVDAEGAGIYGSQSRDDFDRDDVEQ 95


Top