BLASTX nr result

ID: Cnidium21_contig00001218 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001218
         (539 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274448.2| PREDICTED: uncharacterized membrane protein ...   196   2e-48
ref|XP_002533273.1| conserved hypothetical protein [Ricinus comm...   196   2e-48
ref|XP_003611897.1| Membrane protein, putative [Medicago truncat...   183   2e-44
ref|XP_003611896.1| Membrane protein, putative [Medicago truncat...   183   2e-44
gb|ACJ84546.1| unknown [Medicago truncatula] gi|388519313|gb|AFK...   182   3e-44

>ref|XP_002274448.2| PREDICTED: uncharacterized membrane protein YOL092W-like [Vitis
           vinifera] gi|297735218|emb|CBI17580.3| unnamed protein
           product [Vitis vinifera]
          Length = 381

 Score =  196 bits (498), Expect = 2e-48
 Identities = 100/179 (55%), Positives = 122/179 (68%)
 Frame = +3

Query: 3   FHSKSSQGVSLLFLLTWILGDIFNLIGCLLEPVTLPTQYYTALLYTISTVILVLQSLYYD 182
           F +KSS GVSL FLLTWI GD+FNL+GCLLEP TLPTQYYTALLYT STV+LVLQS+YYD
Sbjct: 56  FRTKSSHGVSLAFLLTWIAGDVFNLVGCLLEPATLPTQYYTALLYTTSTVVLVLQSVYYD 115

Query: 183 HVYSWWKSRKVDSNEPIEDAKKPLKPTKENDGDDSTISTSGERKIPTSFYFTSARSLAGS 362
            +Y WWK  +++SN+ +E+ +KPLKP     G     +          +Y+TSARSLAGS
Sbjct: 116 DIYPWWKYGQINSNQVVEEERKPLKPKAGGSGIPIPNTPVKAGSTLRDYYYTSARSLAGS 175

Query: 363 ATPPNRSYLWTAKSGPSALTLXXXXXXXXXXXXXXXXNKKPKTQSKPIPRSAGYGAFLA 539
            TPP RSYL TA+SGPS  T+                + K  ++ KPIPRSAGYGA+LA
Sbjct: 176 TTPPFRSYLRTARSGPS--TVGLDNDSSSDDDTTHVASHKTVSKPKPIPRSAGYGAYLA 232


>ref|XP_002533273.1| conserved hypothetical protein [Ricinus communis]
           gi|223526898|gb|EEF29105.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 377

 Score =  196 bits (497), Expect = 2e-48
 Identities = 100/180 (55%), Positives = 122/180 (67%), Gaps = 1/180 (0%)
 Frame = +3

Query: 3   FHSKSSQGVSLLFLLTWILGDIFNLIGCLLEPVTLPTQYYTALLYTISTVILVLQSLYYD 182
           F +KSS GVSLLFLLTW+ GD+FNL+GCLLEP TLPTQ+YTALLYT ST++LVLQ LYYD
Sbjct: 56  FRTKSSHGVSLLFLLTWVAGDVFNLVGCLLEPATLPTQFYTALLYTTSTIVLVLQGLYYD 115

Query: 183 HVYSWWKSRKVDSNEPIEDAKKPLKPTKENDGDDSTISTSGERKIP-TSFYFTSARSLAG 359
           ++Y WWK +K + N+ +ED KKPLKP   + G    I  +  R  P   +Y+TSARS+A 
Sbjct: 116 YIYRWWKGQKNEVNQQVEDEKKPLKPKLGDSG--IPIPNASTRSTPRREYYYTSARSMAS 173

Query: 360 SATPPNRSYLWTAKSGPSALTLXXXXXXXXXXXXXXXXNKKPKTQSKPIPRSAGYGAFLA 539
           S TPP R YL TAKSGPSA  +                +    +Q +PIPRSAGYG FLA
Sbjct: 174 SGTPPFRGYLRTAKSGPSA--MGFDHESSSSDDEAAPVSAASVSQPRPIPRSAGYGTFLA 231


>ref|XP_003611897.1| Membrane protein, putative [Medicago truncatula]
           gi|355513232|gb|AES94855.1| Membrane protein, putative
           [Medicago truncatula]
          Length = 380

 Score =  183 bits (464), Expect = 2e-44
 Identities = 100/182 (54%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
 Frame = +3

Query: 3   FHSKSSQGVSLLFLLTWILGDIFNLIGCLLEPVTLPTQYYTALLYTISTVILVLQSLYYD 182
           F +KSS GVS++FLLTW+ GDIFNL+GCLLEP TLPTQYYTALLYTI+T++LV+QS YYD
Sbjct: 56  FRAKSSHGVSIVFLLTWVAGDIFNLVGCLLEPATLPTQYYTALLYTITTIVLVVQSFYYD 115

Query: 183 HVYSWWKSR-KVDSNEPIEDAKKPLKPTKENDGDDSTISTSGERKIP-TSFYFTSARSLA 356
           ++Y W K R K++  E  E+ KKPLKP KE       I +   R IP   +Y+ SARSLA
Sbjct: 116 YIYKWCKRRQKINIEETYEEEKKPLKP-KERFELGIPIRSGRHRAIPKPEYYYGSARSLA 174

Query: 357 GSATPPNRSYLWTAKSGPSALTLXXXXXXXXXXXXXXXXNKKPKTQSKPIPRSAG-YGAF 533
           G+ TPP+R+Y+  AKSGPSA+ L                +  P TQ + IPRSAG YG F
Sbjct: 175 GNVTPPSRTYMRVAKSGPSAMGL------NEDSSSDDEAHSVPATQPRQIPRSAGSYGTF 228

Query: 534 LA 539
           LA
Sbjct: 229 LA 230


>ref|XP_003611896.1| Membrane protein, putative [Medicago truncatula]
           gi|355513231|gb|AES94854.1| Membrane protein, putative
           [Medicago truncatula]
          Length = 382

 Score =  183 bits (464), Expect = 2e-44
 Identities = 100/182 (54%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
 Frame = +3

Query: 3   FHSKSSQGVSLLFLLTWILGDIFNLIGCLLEPVTLPTQYYTALLYTISTVILVLQSLYYD 182
           F +KSS GVS++FLLTW+ GDIFNL+GCLLEP TLPTQYYTALLYTI+T++LV+QS YYD
Sbjct: 56  FRAKSSHGVSIVFLLTWVAGDIFNLVGCLLEPATLPTQYYTALLYTITTIVLVVQSFYYD 115

Query: 183 HVYSWWKSR-KVDSNEPIEDAKKPLKPTKENDGDDSTISTSGERKIP-TSFYFTSARSLA 356
           ++Y W K R K++  E  E+ KKPLKP KE       I +   R IP   +Y+ SARSLA
Sbjct: 116 YIYKWCKRRQKINIEETYEEEKKPLKP-KERFELGIPIRSGRHRAIPKPEYYYGSARSLA 174

Query: 357 GSATPPNRSYLWTAKSGPSALTLXXXXXXXXXXXXXXXXNKKPKTQSKPIPRSAG-YGAF 533
           G+ TPP+R+Y+  AKSGPSA+ L                +  P TQ + IPRSAG YG F
Sbjct: 175 GNVTPPSRTYMRVAKSGPSAMGL------NEDSSSDDEAHSVPATQPRQIPRSAGSYGTF 228

Query: 534 LA 539
           LA
Sbjct: 229 LA 230


>gb|ACJ84546.1| unknown [Medicago truncatula] gi|388519313|gb|AFK47718.1| unknown
           [Medicago truncatula]
          Length = 380

 Score =  182 bits (462), Expect = 3e-44
 Identities = 100/182 (54%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
 Frame = +3

Query: 3   FHSKSSQGVSLLFLLTWILGDIFNLIGCLLEPVTLPTQYYTALLYTISTVILVLQSLYYD 182
           F +KSS GVS++FLLTW+ GDIFNL+GCLLEP  LPTQYYTALLYTI+T++LV+QSLYYD
Sbjct: 56  FRAKSSHGVSIVFLLTWVAGDIFNLVGCLLEPAMLPTQYYTALLYTITTIVLVVQSLYYD 115

Query: 183 HVYSWWKSR-KVDSNEPIEDAKKPLKPTKENDGDDSTISTSGERKIP-TSFYFTSARSLA 356
           ++Y W K R K++  E  E+ KKPLKP KE       I +   R IP   +Y+ SARSLA
Sbjct: 116 YIYKWCKRRQKINIEETYEEEKKPLKP-KERFELGIPIRSGRHRAIPKPEYYYGSARSLA 174

Query: 357 GSATPPNRSYLWTAKSGPSALTLXXXXXXXXXXXXXXXXNKKPKTQSKPIPRSAG-YGAF 533
           G+ TPP+R+Y+  AKSGPSA+ L                +  P TQ + IPRSAG YG F
Sbjct: 175 GNVTPPSRTYMRVAKSGPSAMGL------NEDSSSDDEAHSVPATQPRQIPRSAGSYGTF 228

Query: 534 LA 539
           LA
Sbjct: 229 LA 230


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