BLASTX nr result
ID: Cnidium21_contig00001176
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00001176
(1536 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002517768.1| conserved hypothetical protein [Ricinus comm... 246 5e-70
ref|XP_003546900.1| PREDICTED: uncharacterized protein LOC100799... 248 5e-70
ref|XP_002274669.1| PREDICTED: uncharacterized protein LOC100267... 245 7e-70
gb|AFK41380.1| unknown [Lotus japonicus] 243 1e-68
ref|XP_002871581.1| structural constituent of ribosome [Arabidop... 236 2e-67
>ref|XP_002517768.1| conserved hypothetical protein [Ricinus communis]
gi|223543040|gb|EEF44575.1| conserved hypothetical
protein [Ricinus communis]
Length = 283
Score = 246 bits (627), Expect(2) = 5e-70
Identities = 125/159 (78%), Positives = 133/159 (83%), Gaps = 1/159 (0%)
Frame = -1
Query: 1221 NYAVSS-SGGSPVARFLRSTESNIERVIFDFRFXXXXXXXXXXXXXXLCFLNGCVYIVDA 1045
NYA ++ SG SPV +F+RSTESNIER+IFDFRF LCFLNGCVYIVDA
Sbjct: 82 NYAFANPSGSSPVVQFVRSTESNIERIIFDFRFLALLAVGGSLAGSLLCFLNGCVYIVDA 141
Query: 1044 YKVYWSSCSKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNIPNDGPPATDRA 865
YKVYW+SC KG+HTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISN+P D P DRA
Sbjct: 142 YKVYWTSCCKGVHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVPPDVAPQVDRA 201
Query: 864 LKGSSLFGMFALKERPLWMKISSLDELKTKVGHVIVMIL 748
LKGSSLFGMFALKERP WMKI SLDELKTKVGHVIVMIL
Sbjct: 202 LKGSSLFGMFALKERPKWMKICSLDELKTKVGHVIVMIL 240
Score = 47.0 bits (110), Expect(2) = 5e-70
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = -3
Query: 748 LVKMFERSKMVTIATGLDLLSYSEFMILRS 659
LVKMFERSKMVTIATG+DLLSYS + L S
Sbjct: 241 LVKMFERSKMVTIATGMDLLSYSICIFLSS 270
>ref|XP_003546900.1| PREDICTED: uncharacterized protein LOC100799451 [Glycine max]
Length = 266
Score = 248 bits (634), Expect(2) = 5e-70
Identities = 121/162 (74%), Positives = 134/162 (82%)
Frame = -1
Query: 1233 DKVVNYAVSSSGGSPVARFLRSTESNIERVIFDFRFXXXXXXXXXXXXXXLCFLNGCVYI 1054
D NYA+++ G+P+ R +R+TES+IERVIFDFRF LCFLNGC+YI
Sbjct: 62 DPAFNYALTNPNGNPIVRIVRATESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCIYI 121
Query: 1053 VDAYKVYWSSCSKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNIPNDGPPAT 874
+DAYKVYWSSC KG+HTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISN+P D PP
Sbjct: 122 IDAYKVYWSSCVKGVHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVPPDVPPTV 181
Query: 873 DRALKGSSLFGMFALKERPLWMKISSLDELKTKVGHVIVMIL 748
DRALKGSSLFGMFA+KERP WMKI SLDELKTKVGHVIVMIL
Sbjct: 182 DRALKGSSLFGMFAMKERPKWMKICSLDELKTKVGHVIVMIL 223
Score = 44.3 bits (103), Expect(2) = 5e-70
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = -3
Query: 748 LVKMFERSKMVTIATGLDLLSYSEFMILRS 659
LVKMFERSKMVTI TGLDLL YS + L S
Sbjct: 224 LVKMFERSKMVTIVTGLDLLCYSICIFLSS 253
>ref|XP_002274669.1| PREDICTED: uncharacterized protein LOC100267159 [Vitis vinifera]
gi|297736322|emb|CBI24960.3| unnamed protein product
[Vitis vinifera]
Length = 278
Score = 245 bits (625), Expect(2) = 7e-70
Identities = 123/158 (77%), Positives = 132/158 (83%)
Frame = -1
Query: 1221 NYAVSSSGGSPVARFLRSTESNIERVIFDFRFXXXXXXXXXXXXXXLCFLNGCVYIVDAY 1042
NYA+ SP+ RF+R +ES+IERVIFDFRF LCFLNGCVYIVDAY
Sbjct: 78 NYALPDPKASPIVRFVRYSESSIERVIFDFRFLALLAVGGSLAGSLLCFLNGCVYIVDAY 137
Query: 1041 KVYWSSCSKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNIPNDGPPATDRAL 862
KVYW+SC KGIHTG+MVLRLVEAIDVYLAGTVMLIFGMGLYGLFISN+P D PP+ DRAL
Sbjct: 138 KVYWTSCVKGIHTGKMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNVPPDVPPSVDRAL 197
Query: 861 KGSSLFGMFALKERPLWMKISSLDELKTKVGHVIVMIL 748
KGSSLFGMFALKERP WMKISSLDELKTKVGHVIVMIL
Sbjct: 198 KGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMIL 235
Score = 47.4 bits (111), Expect(2) = 7e-70
Identities = 24/30 (80%), Positives = 26/30 (86%)
Frame = -3
Query: 748 LVKMFERSKMVTIATGLDLLSYSEFMILRS 659
LVKMFERSKMVTIATG+DLLSYS + L S
Sbjct: 236 LVKMFERSKMVTIATGMDLLSYSVCIFLSS 265
>gb|AFK41380.1| unknown [Lotus japonicus]
Length = 282
Score = 243 bits (620), Expect(2) = 1e-68
Identities = 119/162 (73%), Positives = 133/162 (82%)
Frame = -1
Query: 1233 DKVVNYAVSSSGGSPVARFLRSTESNIERVIFDFRFXXXXXXXXXXXXXXLCFLNGCVYI 1054
D NYA +++ GSP+ R +R+TES+IER+IFDFRF LCFLNGC+YI
Sbjct: 78 DPAFNYAYANTNGSPIVRMVRATESSIERIIFDFRFLALLAVGGSLAGSLLCFLNGCIYI 137
Query: 1053 VDAYKVYWSSCSKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNIPNDGPPAT 874
DAYKVYW+ C KG+H+G+MVLRLVEAIDVYLAGTVMLIFGMGLYGLFISN P D PP+
Sbjct: 138 FDAYKVYWTCCVKGVHSGKMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNTPPDVPPSV 197
Query: 873 DRALKGSSLFGMFALKERPLWMKISSLDELKTKVGHVIVMIL 748
DRALKGSSLFGMFALKERP WMKISSLDELKTKVGHVIVMIL
Sbjct: 198 DRALKGSSLFGMFALKERPKWMKISSLDELKTKVGHVIVMIL 239
Score = 45.1 bits (105), Expect(2) = 1e-68
Identities = 23/30 (76%), Positives = 25/30 (83%)
Frame = -3
Query: 748 LVKMFERSKMVTIATGLDLLSYSEFMILRS 659
LVKMFERSKMV I+TGLDLLSYS + L S
Sbjct: 240 LVKMFERSKMVAISTGLDLLSYSVCIFLSS 269
>ref|XP_002871581.1| structural constituent of ribosome [Arabidopsis lyrata subsp. lyrata]
gi|297317418|gb|EFH47840.1| structural constituent of
ribosome [Arabidopsis lyrata subsp. lyrata]
Length = 264
Score = 236 bits (601), Expect(2) = 2e-67
Identities = 116/158 (73%), Positives = 130/158 (82%)
Frame = -1
Query: 1221 NYAVSSSGGSPVARFLRSTESNIERVIFDFRFXXXXXXXXXXXXXXLCFLNGCVYIVDAY 1042
+Y + SP A+F RSTESN+ER+IFDFRF LCFLNGCVYIV+AY
Sbjct: 63 SYGTTRKDNSPFAQFFRSTESNVERIIFDFRFLALLAVGGSLAGSLLCFLNGCVYIVEAY 122
Query: 1041 KVYWSSCSKGIHTGQMVLRLVEAIDVYLAGTVMLIFGMGLYGLFISNIPNDGPPATDRAL 862
KVYW++C+KGIHTGQMVLRLVEAIDVYLAGTVMLIF MGLYGLFIS+ P+D PP +DRAL
Sbjct: 123 KVYWTNCAKGIHTGQMVLRLVEAIDVYLAGTVMLIFSMGLYGLFISHSPHDVPPESDRAL 182
Query: 861 KGSSLFGMFALKERPLWMKISSLDELKTKVGHVIVMIL 748
+ SSLFGMFA+KERP WMKISSLDELKTKVGHVIVMIL
Sbjct: 183 RSSSLFGMFAMKERPKWMKISSLDELKTKVGHVIVMIL 220
Score = 48.1 bits (113), Expect(2) = 2e-67
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = -3
Query: 748 LVKMFERSKMVTIATGLDLLSYSEFMILRS 659
LVKMFERSKMVTIATGLDLLSYS + L S
Sbjct: 221 LVKMFERSKMVTIATGLDLLSYSVCIFLSS 250