BLASTX nr result

ID: Cnidium21_contig00001155 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001155
         (594 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554964.1| PREDICTED: uncharacterized protein LOC100805...    68   1e-09
ref|XP_002278440.2| PREDICTED: uncharacterized protein LOC100267...    67   3e-09
ref|XP_002525972.1| nucleic acid binding protein, putative [Rici...    64   2e-08
ref|XP_003637357.1| Zinc finger CCHC domain-containing protein [...    62   6e-08
ref|XP_003555091.1| PREDICTED: uncharacterized protein LOC100782...    62   7e-08

>ref|XP_003554964.1| PREDICTED: uncharacterized protein LOC100805423 [Glycine max]
          Length = 660

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
 Frame = +1

Query: 304 SSDKLVEANGSASLGSKRARVDSEDQQAAVHVRYDCXXXXXXXXXXXXXXXXXXWHAAHC 483
           S  + +E  G++  G+KRAR+  ++ Q +VH  Y+                   WHA H 
Sbjct: 206 SLKRSLETVGTSVSGAKRARITVDEYQPSVHFTYNSLTRASRQKLQELLQKWSAWHAKHV 265

Query: 484 ASSKDSCDALESGGETYYPALQCGTE-NSSVSFLMETQ 594
           +SS D+ + LESG ET++PAL  G E  S+VSF ME Q
Sbjct: 266 SSSSDASEVLESGEETFFPALHVGLEKTSAVSFWMENQ 303


>ref|XP_002278440.2| PREDICTED: uncharacterized protein LOC100267904 [Vitis vinifera]
          Length = 576

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 38/89 (42%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
 Frame = +1

Query: 337 ASLGSKRARVDSEDQQAAVHVRYDCXXXXXXXXXXXXXXXXXXWHAAHCASSKDSCDALE 516
           A  G KR+R+  +DQQ  VHV Y+                   WHA  C+SSKDS + LE
Sbjct: 101 AVTGVKRSRMTCDDQQPFVHVIYNSLSRKSKRKLEELLHHWSEWHAQQCSSSKDSDEVLE 160

Query: 517 SGGETYYPALQCG---TENSSVSFLMETQ 594
           SG ETY+PAL  G    + S VSF M+ Q
Sbjct: 161 SGDETYFPALHVGLGPEKTSIVSFWMDNQ 189


>ref|XP_002525972.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223534704|gb|EEF36396.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 693

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 47/150 (31%), Positives = 71/150 (47%), Gaps = 22/150 (14%)
 Frame = +1

Query: 211 CIESKDLGVDNLSQSDVRAHSDSVQAL--SGNMSS----------------DKLVEAN-- 330
           C+   D+ +D +    ++ + +  +A+  SGN+SS                + L++ +  
Sbjct: 181 CLVETDVDMDLVDSPVMQVNIEVAEAVAVSGNLSSFGFRLNAQNSCLDTQNESLIQNHMM 240

Query: 331 -GSASLGSKRARVDSEDQQAAVHVRYDCXXXXXXXXXXXXXXXXXXWHAAHCASSKDSCD 507
            G    G KRAR+   +QQ +VHV Y+                   WH    +SS+D  +
Sbjct: 241 KGGHVSGVKRARIAYNEQQPSVHVTYNSLTRASKRKLEELLQQWSEWHVQRGSSSQDLNE 300

Query: 508 ALESGGETYYPALQCGTENSS-VSFLMETQ 594
            LESG ETY+PAL  GTE SS VSF +E Q
Sbjct: 301 VLESGEETYFPALCVGTEKSSAVSFWIENQ 330


>ref|XP_003637357.1| Zinc finger CCHC domain-containing protein [Medicago truncatula]
           gi|355503292|gb|AES84495.1| Zinc finger CCHC
           domain-containing protein [Medicago truncatula]
          Length = 543

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 6/113 (5%)
 Frame = +1

Query: 274 DSVQALSGNMSSDKLVEANGSASLGS---KRAR--VDSEDQQAAVHVRYDCXXXXXXXXX 438
           ++V+A + +++      +NGS ++G    KRAR  VD +D Q +VH  Y           
Sbjct: 72  ETVRAENVSVTLKNEESSNGSITIGRRGVKRARITVDDDDHQPSVHFSYKSLTRASKNKL 131

Query: 439 XXXXXXXXXWHAAHCASSKDSCDALESGGETYYPALQCGTEN-SSVSFLMETQ 594
                    WHA + +SS D  + LESG ET++PA+  G E+ SSVSF ME Q
Sbjct: 132 QELLQQWSQWHAKNVSSSNDPSEVLESGEETFFPAICVGHESKSSVSFWMENQ 184


>ref|XP_003555091.1| PREDICTED: uncharacterized protein LOC100782251 [Glycine max]
          Length = 162

 Score = 62.0 bits (149), Expect = 7e-08
 Identities = 34/94 (36%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
 Frame = +1

Query: 304 SSDKLVEANGSASLGSKRARVDSEDQQAAVHVRYDCXXXXXXXXXXXXXXXXXXWHAAHC 483
           S  + +E  G++  G+KRAR+  ++ Q +VH  Y+                   WHA H 
Sbjct: 65  SLKRSLETVGTSVSGAKRARITVDEDQPSVHFTYNSLTRASRQKLQELLQKWSEWHAKHV 124

Query: 484 ASSKDSCDALESGGETYYPALQCGTENSS--VSF 579
            SS D+ + LESG ET++PAL  G E +S  VSF
Sbjct: 125 LSSNDASEVLESGEETFFPALHVGLEKTSAVVSF 158


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