BLASTX nr result

ID: Cnidium21_contig00001150 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001150
         (865 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43504.1| unknown [Lotus japonicus]                              324   1e-86
emb|CAD89270.1| putative photosystem I reaction centre PSI-D sub...   321   1e-85
sp|P12372.1|PSAD_SOLLC RecName: Full=Photosystem I reaction cent...   320   3e-85
dbj|BAF80475.1| PSI reaction center subunit II [Citrus sinensis]      320   3e-85
dbj|BAF80470.1| PSI reaction center subunit II [Citrus sinensis]...   319   4e-85

>gb|AFK43504.1| unknown [Lotus japonicus]
          Length = 210

 Score =  324 bits (831), Expect = 1e-86
 Identities = 166/205 (80%), Positives = 178/205 (86%), Gaps = 6/205 (2%)
 Frame = +3

Query: 126 QASLFTPTLTNPKS-PWKQSTLISFV--KPLKSAVSP-SRTVIRAAEGKTEAVV--EEKA 287
           QASLF+P L+   S PWKQS  +SF   KPLK   SP + T IRAA+ KTEA V  +E A
Sbjct: 6   QASLFSPPLSGRVSAPWKQSPTLSFTNTKPLKFTTSPRTTTTIRAADEKTEAPVATKEAA 65

Query: 288 PAGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREG 467
           P GFTPP+LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREG
Sbjct: 66  PVGFTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREG 125

Query: 468 PNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPSGEVQYLHPKDGVYPEKVNPGRLGAN 647
           PNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP+GEVQYLHPKDGVYPEKVNPGR G  
Sbjct: 126 PNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVG 185

Query: 648 QNMRNIGKNVSPIDVKFTGKQVYDI 722
           QN R+IGKNVSPI+VKFTG+Q YD+
Sbjct: 186 QNFRSIGKNVSPIEVKFTGRQPYDV 210


>emb|CAD89270.1| putative photosystem I reaction centre PSI-D subunit precursor
           [Solanum tuberosum]
          Length = 207

 Score =  321 bits (823), Expect = 1e-85
 Identities = 165/202 (81%), Positives = 172/202 (85%), Gaps = 3/202 (1%)
 Frame = +3

Query: 126 QASLFTPTLTNPKS--PWKQSTL-ISFVKPLKSAVSPSRTVIRAAEGKTEAVVEEKAPAG 296
           QASLFTP L+ PKS  PWKQS L  S  K LKS VS +R +   AE    A  E+ APAG
Sbjct: 6   QASLFTPALSVPKSTAPWKQSLLSFSTPKQLKSTVSVTRPIRAMAEEAPAATEEKPAPAG 65

Query: 297 FTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNL 476
           FTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNL
Sbjct: 66  FTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNL 125

Query: 477 LKLARKEQCLALGTRLRSKYKIKYQFYRVFPSGEVQYLHPKDGVYPEKVNPGRLGANQNM 656
           LKLARKEQCLALGTRLRSKYKI YQFYRVFP+GEVQYLHPKDGVYPEKVNPGR G  QN 
Sbjct: 126 LKLARKEQCLALGTRLRSKYKINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNF 185

Query: 657 RNIGKNVSPIDVKFTGKQVYDI 722
           R+IGKN S I+VKFTGKQVYDI
Sbjct: 186 RSIGKNKSAIEVKFTGKQVYDI 207


>sp|P12372.1|PSAD_SOLLC RecName: Full=Photosystem I reaction center subunit II,
           chloroplastic; AltName: Full=Photosystem I 20 kDa
           subunit; Short=PSI-D; Flags: Precursor
           gi|170492|gb|AAA34185.1| photosystem I subunit II
           protein precursor [Solanum lycopersicum]
           gi|226544|prf||1601516A photosystem I reaction center II
          Length = 208

 Score =  320 bits (819), Expect = 3e-85
 Identities = 165/204 (80%), Positives = 174/204 (85%), Gaps = 5/204 (2%)
 Frame = +3

Query: 126 QASLFTPTLTNPKS---PWKQSTLISFVKP--LKSAVSPSRTVIRAAEGKTEAVVEEKAP 290
           QASLFTP L+ PKS   PWKQS L+SF  P  LKS VS +R +   AE    A  E+ AP
Sbjct: 6   QASLFTPPLSVPKSTTAPWKQS-LVSFSTPKQLKSTVSVTRPIRAMAEEAPAATEEKPAP 64

Query: 291 AGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGP 470
           AGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMR+GP
Sbjct: 65  AGFTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMRQGP 124

Query: 471 NLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPSGEVQYLHPKDGVYPEKVNPGRLGANQ 650
           NLLKLARKEQCLALGTRLRSKYKI YQFYRVFP+GEVQYLHPKDGVYPEKVNPGR G  Q
Sbjct: 125 NLLKLARKEQCLALGTRLRSKYKINYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQ 184

Query: 651 NMRNIGKNVSPIDVKFTGKQVYDI 722
           N R+IGKN S I+VKFTGKQVYDI
Sbjct: 185 NFRSIGKNKSAIEVKFTGKQVYDI 208


>dbj|BAF80475.1| PSI reaction center subunit II [Citrus sinensis]
          Length = 207

 Score =  320 bits (819), Expect = 3e-85
 Identities = 161/202 (79%), Positives = 173/202 (85%), Gaps = 3/202 (1%)
 Frame = +3

Query: 126 QASLFTP---TLTNPKSPWKQSTLISFVKPLKSAVSPSRTVIRAAEGKTEAVVEEKAPAG 296
           QASLF P   + T   +PWKQS+  S V+PLK     + T+   AEGKTE   +E AP G
Sbjct: 8   QASLFAPANFSTTKSSAPWKQSSSFS-VRPLKHNAPRTNTIKAMAEGKTETPTKE-APVG 65

Query: 297 FTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNL 476
           FTPP+LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNL
Sbjct: 66  FTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNL 125

Query: 477 LKLARKEQCLALGTRLRSKYKIKYQFYRVFPSGEVQYLHPKDGVYPEKVNPGRLGANQNM 656
           LKLARKEQCLALGTRLRSKYKIKYQFYRVFP+GEVQYLHPKDGVYPEKVNPGR G  QN 
Sbjct: 126 LKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNY 185

Query: 657 RNIGKNVSPIDVKFTGKQVYDI 722
           R+IGKNVSPI+VKFTGKQVYD+
Sbjct: 186 RSIGKNVSPIEVKFTGKQVYDV 207


>dbj|BAF80470.1| PSI reaction center subunit II [Citrus sinensis]
           gi|157678958|dbj|BAF80477.1| PSI reaction center subunit
           II [Citrus sinensis]
          Length = 207

 Score =  319 bits (818), Expect = 4e-85
 Identities = 161/202 (79%), Positives = 173/202 (85%), Gaps = 3/202 (1%)
 Frame = +3

Query: 126 QASLFTP---TLTNPKSPWKQSTLISFVKPLKSAVSPSRTVIRAAEGKTEAVVEEKAPAG 296
           QASLF P   + T   +PWKQS+  S V+PLK     + T+   AEGKTE   +E AP G
Sbjct: 8   QASLFAPANFSTTKSSAPWKQSSSFS-VRPLKHNAPRTNTIKAMAEGKTETPTKE-APVG 65

Query: 297 FTPPQLDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNL 476
           FTPP+LDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNL
Sbjct: 66  FTPPELDPNTPSPIFGGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNL 125

Query: 477 LKLARKEQCLALGTRLRSKYKIKYQFYRVFPSGEVQYLHPKDGVYPEKVNPGRLGANQNM 656
           LKLARKEQCLALGTRLRSKYKIKYQFYRVFP+GEVQYLHPKDGVYPEKVNPGR G  QN 
Sbjct: 126 LKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGREGVGQNY 185

Query: 657 RNIGKNVSPIDVKFTGKQVYDI 722
           R+IGKNVSPI+VKFTGKQVYD+
Sbjct: 186 RSIGKNVSPIEVKFTGKQVYDL 207


Top