BLASTX nr result

ID: Cnidium21_contig00001142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001142
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322150.1| predicted protein [Populus trichocarpa] gi|2...   370   e-101
ref|XP_002324195.1| predicted protein [Populus trichocarpa] gi|1...   370   e-100
ref|XP_002279950.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis...   368   e-100
ref|XP_004141698.1| PREDICTED: 40S ribosomal protein S3-3-like [...   367   e-100
ref|XP_002281141.2| PREDICTED: 40S ribosomal protein S3-3-like [...   367   e-100

>ref|XP_002322150.1| predicted protein [Populus trichocarpa] gi|222869146|gb|EEF06277.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  370 bits (951), Expect = e-101
 Identities = 186/196 (94%), Positives = 189/196 (96%)
 Frame = -1

Query: 593 EDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEK 414
           EDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPEN VELYAEK
Sbjct: 31  EDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENGVELYAEK 90

Query: 413 VNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSM 234
           VNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MESGAKGCEVIVSGKLRAQRAKSM
Sbjct: 91  VNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSM 150

Query: 233 KFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLAWDPKGKQGPMTPLPDLVTI 54
           KFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIML WDPKGK GPMTPLPDLVTI
Sbjct: 151 KFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGPMTPLPDLVTI 210

Query: 53  HPPKEDEEYRQPIAAT 6
           HPPKE+EEY  P+  T
Sbjct: 211 HPPKEEEEYVPPLLTT 226


>ref|XP_002324195.1| predicted protein [Populus trichocarpa] gi|118483222|gb|ABK93514.1|
           unknown [Populus trichocarpa]
           gi|118487214|gb|ABK95435.1| unknown [Populus
           trichocarpa] gi|222865629|gb|EEF02760.1| predicted
           protein [Populus trichocarpa]
          Length = 234

 Score =  370 bits (950), Expect = e-100
 Identities = 187/196 (95%), Positives = 188/196 (95%)
 Frame = -1

Query: 593 EDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEK 414
           EDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPEN VELYAEK
Sbjct: 31  EDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENGVELYAEK 90

Query: 413 VNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSM 234
           VNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MESGAKGCEVIVSGKLRAQRAKSM
Sbjct: 91  VNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSM 150

Query: 233 KFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLAWDPKGKQGPMTPLPDLVTI 54
           KFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIML WDPKGK GPMTPLPDLVTI
Sbjct: 151 KFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGPMTPLPDLVTI 210

Query: 53  HPPKEDEEYRQPIAAT 6
           HPPKEDEEY  P   T
Sbjct: 211 HPPKEDEEYVAPPVMT 226


>ref|XP_002279950.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis vinifera]
           gi|297738588|emb|CBI27833.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score =  368 bits (944), Expect = e-100
 Identities = 185/192 (96%), Positives = 188/192 (97%)
 Frame = -1

Query: 593 EDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEK 414
           EDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEK
Sbjct: 31  EDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEK 90

Query: 413 VNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSM 234
           VNNRGLCA+AQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSM
Sbjct: 91  VNNRGLCAVAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSM 150

Query: 233 KFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLAWDPKGKQGPMTPLPDLVTI 54
           KFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIML WDPKGKQGP TPLPDLVTI
Sbjct: 151 KFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDLVTI 210

Query: 53  HPPKEDEEYRQP 18
           H PKE+EEY +P
Sbjct: 211 HTPKEEEEYIRP 222


>ref|XP_004141698.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
           gi|449521735|ref|XP_004167885.1| PREDICTED: 40S
           ribosomal protein S3-3-like [Cucumis sativus]
          Length = 236

 Score =  367 bits (943), Expect = e-100
 Identities = 184/194 (94%), Positives = 190/194 (97%)
 Frame = -1

Query: 593 EDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEK 414
           EDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEK
Sbjct: 31  EDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEK 90

Query: 413 VNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSM 234
           VNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MESGAKGCEVIVSGKLRAQRAKSM
Sbjct: 91  VNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSM 150

Query: 233 KFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLAWDPKGKQGPMTPLPDLVTI 54
           KFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIML WDPKGKQGP TPLPDLVTI
Sbjct: 151 KFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPPTPLPDLVTI 210

Query: 53  HPPKEDEEYRQPIA 12
           H PKE+E++ +P+A
Sbjct: 211 HSPKEEEDFIRPVA 224


>ref|XP_002281141.2| PREDICTED: 40S ribosomal protein S3-3-like [Vitis vinifera]
           gi|296081703|emb|CBI20708.3| unnamed protein product
           [Vitis vinifera]
          Length = 235

 Score =  367 bits (943), Expect = e-100
 Identities = 184/196 (93%), Positives = 189/196 (96%)
 Frame = -1

Query: 593 EDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEK 414
           EDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKG+RIRELTSVVQKRFKFPENSVELYAEK
Sbjct: 31  EDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGKRIRELTSVVQKRFKFPENSVELYAEK 90

Query: 413 VNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSM 234
           VNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF+MESGAKGCEVIVSGKLRAQRAKSM
Sbjct: 91  VNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSM 150

Query: 233 KFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIMLAWDPKGKQGPMTPLPDLVTI 54
           KFKDGYMISSGQPVK+YIDSAVRHVLLRQGVLGIKVKIML WDPKGKQGP TPLPDLVTI
Sbjct: 151 KFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDLVTI 210

Query: 53  HPPKEDEEYRQPIAAT 6
           H PKE+EEY  P+  T
Sbjct: 211 HTPKEEEEYVPPVLTT 226


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