BLASTX nr result

ID: Cnidium21_contig00001126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001126
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265878.1| PREDICTED: histone H2AX [Vitis vinifera] gi|...   102   3e-20
gb|AEQ33640.1| histone H2A [Lycium barbarum]                          101   6e-20
ref|XP_004148883.1| PREDICTED: histone H2AX-like [Cucumis sativu...   100   1e-19
ref|XP_002520711.1| histone h2a, putative [Ricinus communis] gi|...   100   1e-19
sp|P35063.1|H2AX_PICAB RecName: Full=Histone H2AX gi|297871|emb|...   100   2e-19

>ref|XP_002265878.1| PREDICTED: histone H2AX [Vitis vinifera]
           gi|147815277|emb|CAN70026.1| hypothetical protein
           VITISV_030174 [Vitis vinifera]
          Length = 139

 Score =  102 bits (255), Expect = 3e-20
 Identities = 54/86 (62%), Positives = 63/86 (73%)
 Frame = +1

Query: 58  MSSTGAAKGIAGRGRSKGTKSVSRSQKAGLQFPVGRIARFLKAGRYAQRVGSGSPXXXXX 237
           MSSTG+ KG  GRG+ K +KSVSRSQKAGLQFPVGRIARFLKAG+YA+RVG+G+P     
Sbjct: 1   MSSTGSTKG--GRGKPKASKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSA 58

Query: 238 XXXXXXXXXXXXXGNAARDNKKSRII 315
                        GNAARDNKK+RI+
Sbjct: 59  VLEYLAAEVLELAGNAARDNKKNRIV 84


>gb|AEQ33640.1| histone H2A [Lycium barbarum]
          Length = 142

 Score =  101 bits (252), Expect = 6e-20
 Identities = 52/85 (61%), Positives = 60/85 (70%)
 Frame = +1

Query: 61  SSTGAAKGIAGRGRSKGTKSVSRSQKAGLQFPVGRIARFLKAGRYAQRVGSGSPXXXXXX 240
           S  GA KG AGRG+ K +KSVSRS KAGLQFPVGRIARFLKAG+YA+RVG+G+P      
Sbjct: 3   SGAGAGKGGAGRGKPKASKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 62

Query: 241 XXXXXXXXXXXXGNAARDNKKSRII 315
                       GNAARDNKK+RI+
Sbjct: 63  LEYLAAEVLELAGNAARDNKKNRIV 87


>ref|XP_004148883.1| PREDICTED: histone H2AX-like [Cucumis sativus]
           gi|449528788|ref|XP_004171385.1| PREDICTED: histone
           H2AX-like [Cucumis sativus]
          Length = 139

 Score =  100 bits (249), Expect = 1e-19
 Identities = 53/86 (61%), Positives = 62/86 (72%)
 Frame = +1

Query: 58  MSSTGAAKGIAGRGRSKGTKSVSRSQKAGLQFPVGRIARFLKAGRYAQRVGSGSPXXXXX 237
           MSS+ + KG  GRG+ K TKSVSRSQKAGLQFPVGRIARFLKAG+YA+RVG+G+P     
Sbjct: 1   MSSSASTKG--GRGKPKATKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSA 58

Query: 238 XXXXXXXXXXXXXGNAARDNKKSRII 315
                        GNAARDNKK+RI+
Sbjct: 59  VLEYLAAEVLELAGNAARDNKKNRIV 84


>ref|XP_002520711.1| histone h2a, putative [Ricinus communis]
           gi|223540096|gb|EEF41673.1| histone h2a, putative
           [Ricinus communis]
          Length = 139

 Score =  100 bits (249), Expect = 1e-19
 Identities = 54/86 (62%), Positives = 61/86 (70%)
 Frame = +1

Query: 58  MSSTGAAKGIAGRGRSKGTKSVSRSQKAGLQFPVGRIARFLKAGRYAQRVGSGSPXXXXX 237
           MSS GA KG  GRG+ K +KSVSRSQKAGLQFPVGRIARFLKAG+YA RVG+G+P     
Sbjct: 1   MSSGGATKG--GRGKPKSSKSVSRSQKAGLQFPVGRIARFLKAGKYADRVGAGAPVYLSA 58

Query: 238 XXXXXXXXXXXXXGNAARDNKKSRII 315
                        GNAARDNKK+RI+
Sbjct: 59  VLEYLAAEVLELAGNAARDNKKNRIV 84


>sp|P35063.1|H2AX_PICAB RecName: Full=Histone H2AX gi|297871|emb|CAA48030.1| histone H2A
           [Picea abies] gi|30024112|emb|CAC84681.1| putative
           histone H2B [Pinus pinaster] gi|116779069|gb|ABK21126.1|
           unknown [Picea sitchensis]
          Length = 138

 Score =  100 bits (248), Expect = 2e-19
 Identities = 55/86 (63%), Positives = 64/86 (74%)
 Frame = +1

Query: 58  MSSTGAAKGIAGRGRSKGTKSVSRSQKAGLQFPVGRIARFLKAGRYAQRVGSGSPXXXXX 237
           MSS+GA KG  GRG++K TKSVSRSQKAGLQFPVGRIARFLKAG+YA+RVG+G+P     
Sbjct: 1   MSSSGA-KG--GRGKAKSTKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAA 57

Query: 238 XXXXXXXXXXXXXGNAARDNKKSRII 315
                        GNAARDNKK+RI+
Sbjct: 58  VLEYLAAEVLELAGNAARDNKKNRIV 83


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