BLASTX nr result

ID: Cnidium21_contig00001123 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001123
         (1799 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263640.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   774   0.0  
ref|XP_004163791.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   741   0.0  
ref|XP_004139692.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   741   0.0  
ref|XP_002307523.1| predicted protein [Populus trichocarpa] gi|2...   736   0.0  
ref|XP_003518458.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   728   0.0  

>ref|XP_002263640.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39 [Vitis vinifera]
          Length = 635

 Score =  774 bits (1998), Expect = 0.0
 Identities = 411/564 (72%), Positives = 459/564 (81%), Gaps = 7/564 (1%)
 Frame = +1

Query: 127  PKSYKPISPLYLK---RVYLGFRPL-CSATTIATNPSLNEAIEPMKHSILLEKLRIRHLK 294
            P   +P+  L +    RV+LGF+P+ CS+++  T    ++A++PM+HSILLEKLR RHLK
Sbjct: 25   PSMRRPLYKLAIPTTTRVFLGFKPISCSSSSSTTAIEADQALQPMRHSILLEKLRFRHLK 84

Query: 295  DNTKTPLSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNFEELGLSNEVLGALGEMGISV 474
            D+ K+P +R                             +FEELGLS EV+ A+ E GISV
Sbjct: 85   DSAKSPQTRSPPLSTGGKEGEPGSMKSQKKPKMVS---SFEELGLSEEVMAAVRETGISV 141

Query: 475  PTEIQCIGVPVVIEGKSVVLGSHTGSGKTLAYMLPISQLLRRDEALYGMLMKPRRPRAVV 654
            PTEIQCIGVP V+EG+SVVLGSHTGSGKTLAYMLP+ QLLRRDEAL G+LMKPRRPRAVV
Sbjct: 142  PTEIQCIGVPAVLEGRSVVLGSHTGSGKTLAYMLPLVQLLRRDEALSGVLMKPRRPRAVV 201

Query: 655  LCPTRELSEQVFRVAKSVSHHARFRCTMVSGGGRLRPQEDSLNGPIDMVVGTPGRVLQHI 834
            LCPTRELSEQVFRVAKS+SHHARFR TMVSGGGRLRPQEDSLN PIDMVVGTPGRVLQHI
Sbjct: 202  LCPTRELSEQVFRVAKSISHHARFRSTMVSGGGRLRPQEDSLNIPIDMVVGTPGRVLQHI 261

Query: 835  EEGNIVYGDIKYVVLDEADTMFDRGFGPDIRKFLGPLKNRASKPGGLGFQTVLVTATMTQ 1014
            EEGN+VYG+IKY+VLDEADTMFDRGFGPDIRKFL PLKNRASK    GFQTVLVTATMT+
Sbjct: 262  EEGNMVYGEIKYLVLDEADTMFDRGFGPDIRKFLAPLKNRASKSDDQGFQTVLVTATMTK 321

Query: 1015 AVQKLVDEEFEGISHVRTSTLHKKIALARHDFIKLSGAENKLEALLQVLEPSLAKGNRVM 1194
            AVQKL+DEEF+GI H+RTSTLHKKIA ARHDFIKLSG+ENKLEALLQVLEPSLAKGN+VM
Sbjct: 322  AVQKLIDEEFQGIVHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLAKGNKVM 381

Query: 1195 VFCNTLNSSRAVDHFLSENQISTVNYHGEVPAEQRVENLKKFKSDDGDCPTLVCTDLAAR 1374
            VFCNTLNSSRAVDHFL ENQI TVNYHGEVPAEQRVENLKKFK++DGDCPTLVCTDLAAR
Sbjct: 382  VFCNTLNSSRAVDHFLGENQIFTVNYHGEVPAEQRVENLKKFKTEDGDCPTLVCTDLAAR 441

Query: 1375 GLDLDVDHVIMFDFPLTSIDYLHRTGRTARMGAKGKVTSLVAKKDHNLATRIEEAMMKNE 1554
            GLDLDVDHVIMFDFPL SIDYLHRTGRTARMGAKGKVTSLVAKKD  LATRIEEA+ KNE
Sbjct: 442  GLDLDVDHVIMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVAKKDLLLATRIEEAIRKNE 501

Query: 1555 SLESLTVDYIKRDTARSKISQNTVKNAKLTKVSSR--GTKAVSGRSASVRGKAGTSTR-T 1725
            SLE+LT D ++RD AR+KIS+   KNA L KVS +   TK  S +S+S      TS R T
Sbjct: 502  SLEALTADNLRRDVARAKISEQKAKNANLVKVSKQKNKTKVESMKSSSKAASTQTSGRKT 561

Query: 1726 AGSNSGKDSSAHKSKRGATKVSRP 1797
             G  SGK S   KSK+   K+ +P
Sbjct: 562  LGGKSGKVSPPTKSKK-TVKILKP 584


>ref|XP_004163791.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Cucumis
            sativus]
          Length = 634

 Score =  741 bits (1914), Expect = 0.0
 Identities = 387/547 (70%), Positives = 439/547 (80%), Gaps = 3/547 (0%)
 Frame = +1

Query: 166  RVYLGFRPLCSATTIATNPSLNEAI---EPMKHSILLEKLRIRHLKDNTKTPLSRXXXXX 336
            R + GFRPL SAT   T+    E I   EP+KHS LLE+LR RHLK++   P ++     
Sbjct: 39   RNFSGFRPLSSATAATTSTESTETIQVIEPLKHSQLLERLRTRHLKESA--PKTKPTRNT 96

Query: 337  XXXXXXXXXXXXXXXXXXXXXXXLNFEELGLSNEVLGALGEMGISVPTEIQCIGVPVVIE 516
                                    +FEELGL+ EV+GA+ EMGI VP+EIQCIG+P V+E
Sbjct: 97   LSQSVGSAEDEMKKSEKKKKKLDESFEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLE 156

Query: 517  GKSVVLGSHTGSGKTLAYMLPISQLLRRDEALYGMLMKPRRPRAVVLCPTRELSEQVFRV 696
            GKSV+LGSHTGSGKTLAY+LP+ QLLRRDE L+G LMKPRRPRAVVLCPTRELSEQVFRV
Sbjct: 157  GKSVILGSHTGSGKTLAYLLPLVQLLRRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRV 216

Query: 697  AKSVSHHARFRCTMVSGGGRLRPQEDSLNGPIDMVVGTPGRVLQHIEEGNIVYGDIKYVV 876
            +KS+SHHARFR TMVSGGGRLRPQEDSL+ PIDMVVGTPGRVLQHIE GN+VYGDIKY+V
Sbjct: 217  SKSISHHARFRSTMVSGGGRLRPQEDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLV 276

Query: 877  LDEADTMFDRGFGPDIRKFLGPLKNRASKPGGLGFQTVLVTATMTQAVQKLVDEEFEGIS 1056
            LDEADTMFD GFGPDIRKF+GPLK+RAS     GFQT+LVTATMT+AVQKL+DEEF+GI 
Sbjct: 277  LDEADTMFDHGFGPDIRKFIGPLKHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIV 336

Query: 1057 HVRTSTLHKKIALARHDFIKLSGAENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDH 1236
            H+RTSTLHKKIA ARHDFIKLSG+ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDH
Sbjct: 337  HLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDH 396

Query: 1237 FLSENQISTVNYHGEVPAEQRVENLKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDF 1416
            FL ENQISTVNYHGEVPA++RVENLKKFKSDD DCPTLVCTDLAARGLDLDVDHVIMFDF
Sbjct: 397  FLGENQISTVNYHGEVPAQKRVENLKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDF 456

Query: 1417 PLTSIDYLHRTGRTARMGAKGKVTSLVAKKDHNLATRIEEAMMKNESLESLTVDYIKRDT 1596
            P  SIDYLHRTGRTARMGAKGKVTSLV KKD+ LATRIEEA+ KNESLESLT D + RD 
Sbjct: 457  PSNSIDYLHRTGRTARMGAKGKVTSLVGKKDNILATRIEEAIRKNESLESLTADSVWRDV 516

Query: 1597 ARSKISQNTVKNAKLTKVSSRGTKAVSGRSASVRGKAGTSTRTAGSNSGKDSSAHKSKRG 1776
            AR++I+++  KNAKL K S+  + A S  SA       +S  + G   GK S + ++++ 
Sbjct: 517  ARNRITEHKTKNAKLIKASTGRSGAKSATSA----PKSSSVHSKG-EPGKASYSERTRKP 571

Query: 1777 ATKVSRP 1797
               VS+P
Sbjct: 572  GVSVSKP 578


>ref|XP_004139692.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Cucumis
            sativus]
          Length = 634

 Score =  741 bits (1912), Expect = 0.0
 Identities = 386/547 (70%), Positives = 439/547 (80%), Gaps = 3/547 (0%)
 Frame = +1

Query: 166  RVYLGFRPLCSATTIATNPSLNEAI---EPMKHSILLEKLRIRHLKDNTKTPLSRXXXXX 336
            R + GFRP+ SAT   T+    E I   EP+KHS LLE+LR RHLK++   P ++     
Sbjct: 39   RNFSGFRPISSATAATTSTESTETIQVIEPLKHSQLLERLRTRHLKESA--PKTKPTRNT 96

Query: 337  XXXXXXXXXXXXXXXXXXXXXXXLNFEELGLSNEVLGALGEMGISVPTEIQCIGVPVVIE 516
                                    +FEELGL+ EV+GA+ EMGI VP+EIQCIG+P V+E
Sbjct: 97   LSQSVGSAEDEMKKSEKKKKKLDESFEELGLNEEVMGAVREMGIQVPSEIQCIGIPAVLE 156

Query: 517  GKSVVLGSHTGSGKTLAYMLPISQLLRRDEALYGMLMKPRRPRAVVLCPTRELSEQVFRV 696
            GKSV+LGSHTGSGKTLAY+LP+ QLLRRDE L+G LMKPRRPRAVVLCPTRELSEQVFRV
Sbjct: 157  GKSVILGSHTGSGKTLAYLLPLVQLLRRDEELFGRLMKPRRPRAVVLCPTRELSEQVFRV 216

Query: 697  AKSVSHHARFRCTMVSGGGRLRPQEDSLNGPIDMVVGTPGRVLQHIEEGNIVYGDIKYVV 876
            +KS+SHHARFR TMVSGGGRLRPQEDSL+ PIDMVVGTPGRVLQHIE GN+VYGDIKY+V
Sbjct: 217  SKSISHHARFRSTMVSGGGRLRPQEDSLSNPIDMVVGTPGRVLQHIEAGNMVYGDIKYLV 276

Query: 877  LDEADTMFDRGFGPDIRKFLGPLKNRASKPGGLGFQTVLVTATMTQAVQKLVDEEFEGIS 1056
            LDEADTMFD GFGPDIRKF+GPLK+RAS     GFQT+LVTATMT+AVQKL+DEEF+GI 
Sbjct: 277  LDEADTMFDHGFGPDIRKFIGPLKHRASSHDDQGFQTILVTATMTKAVQKLIDEEFQGIV 336

Query: 1057 HVRTSTLHKKIALARHDFIKLSGAENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDH 1236
            H+RTSTLHKKIA ARHDFIKLSG+ENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDH
Sbjct: 337  HLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDH 396

Query: 1237 FLSENQISTVNYHGEVPAEQRVENLKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDF 1416
            FL ENQISTVNYHGEVPA++RVENLKKFKSDD DCPTLVCTDLAARGLDLDVDHVIMFDF
Sbjct: 397  FLGENQISTVNYHGEVPAQKRVENLKKFKSDDADCPTLVCTDLAARGLDLDVDHVIMFDF 456

Query: 1417 PLTSIDYLHRTGRTARMGAKGKVTSLVAKKDHNLATRIEEAMMKNESLESLTVDYIKRDT 1596
            P  SIDYLHRTGRTARMGAKGKVTSLV KKD+ LATRIEEA+ KNESLESLT D + RD 
Sbjct: 457  PSNSIDYLHRTGRTARMGAKGKVTSLVGKKDNILATRIEEAIRKNESLESLTADSVWRDV 516

Query: 1597 ARSKISQNTVKNAKLTKVSSRGTKAVSGRSASVRGKAGTSTRTAGSNSGKDSSAHKSKRG 1776
            AR++I+++  KNAKL K S+  + A S  SA       +S  + G   GK S + ++++ 
Sbjct: 517  ARNRITEHKTKNAKLIKASTGRSGAKSATSA----PKSSSVHSKG-EPGKASYSERTRKP 571

Query: 1777 ATKVSRP 1797
               VS+P
Sbjct: 572  GVSVSKP 578


>ref|XP_002307523.1| predicted protein [Populus trichocarpa] gi|222856972|gb|EEE94519.1|
            predicted protein [Populus trichocarpa]
          Length = 573

 Score =  736 bits (1899), Expect = 0.0
 Identities = 381/506 (75%), Positives = 422/506 (83%), Gaps = 8/506 (1%)
 Frame = +1

Query: 166  RVYLGF--RPLC--SATTIATNPSLNEAIEPMKHSILLEKLRIRHLKDNTKTPLS----R 321
            RV LGF  RPLC  S+TT AT        + +KHSILLE+LR+RHLK + K  L+    +
Sbjct: 34   RVLLGFNFRPLCTLSSTTAATER------DEVKHSILLERLRLRHLKGSKKPQLTDTQTQ 87

Query: 322  XXXXXXXXXXXXXXXXXXXXXXXXXXXXLNFEELGLSNEVLGALGEMGISVPTEIQCIGV 501
                                         +FEELGLS EV+GA+ EMGI VPTEIQCIG+
Sbjct: 88   TALKPVVLIEGEEEEDGFKKSKKGKKIAGSFEELGLSEEVMGAVKEMGIEVPTEIQCIGI 147

Query: 502  PVVIEGKSVVLGSHTGSGKTLAYMLPISQLLRRDEALYGMLMKPRRPRAVVLCPTRELSE 681
            P +++ ++VVLGSHTGSGKTLAYMLP+ QLLRRDEAL G LMKPRRPRAVVLCPTRELSE
Sbjct: 148  PAILDSRTVVLGSHTGSGKTLAYMLPLVQLLRRDEALLGRLMKPRRPRAVVLCPTRELSE 207

Query: 682  QVFRVAKSVSHHARFRCTMVSGGGRLRPQEDSLNGPIDMVVGTPGRVLQHIEEGNIVYGD 861
            QVFRVAKS+ HHARFR TMVSGGGR+RPQEDSLN PIDMVVGTPGRVLQHI++GN+VYGD
Sbjct: 208  QVFRVAKSIGHHARFRSTMVSGGGRMRPQEDSLNNPIDMVVGTPGRVLQHIQDGNMVYGD 267

Query: 862  IKYVVLDEADTMFDRGFGPDIRKFLGPLKNRASKPGGLGFQTVLVTATMTQAVQKLVDEE 1041
            IKY+VLDEADTMFDRGFGPDI KFLGPLKNR SK  G GFQT+LVTATMT+AVQKL+DEE
Sbjct: 268  IKYLVLDEADTMFDRGFGPDIHKFLGPLKNRTSKSDGQGFQTILVTATMTKAVQKLIDEE 327

Query: 1042 FEGISHVRTSTLHKKIALARHDFIKLSGAENKLEALLQVLEPSLAKGNRVMVFCNTLNSS 1221
            F+GI H+RTSTLHKKIA ARHDFIKLSG+ENKLEALLQVLEPSLAKGNRVMVFCNTLNSS
Sbjct: 328  FQGIEHLRTSTLHKKIASARHDFIKLSGSENKLEALLQVLEPSLAKGNRVMVFCNTLNSS 387

Query: 1222 RAVDHFLSENQISTVNYHGEVPAEQRVENLKKFKSDDGDCPTLVCTDLAARGLDLDVDHV 1401
            RA DHFL+ENQISTVNYHGEVPAEQRVENL KFKSDDGDCPTLVCTDLAARGLDLDVDHV
Sbjct: 388  RAADHFLAENQISTVNYHGEVPAEQRVENLNKFKSDDGDCPTLVCTDLAARGLDLDVDHV 447

Query: 1402 IMFDFPLTSIDYLHRTGRTARMGAKGKVTSLVAKKDHNLATRIEEAMMKNESLESLTVDY 1581
            IMFDFPL SIDYLHRTGRTARMGAKGKVTSLVA+KD  LA RIEEAM KNESLESLTVD 
Sbjct: 448  IMFDFPLNSIDYLHRTGRTARMGAKGKVTSLVARKDQQLAARIEEAMRKNESLESLTVDN 507

Query: 1582 IKRDTARSKISQNTVKNAKLTKVSSR 1659
            ++RD AR++I++   K+AKL K S++
Sbjct: 508  VRRDIARARITEQQGKSAKLIKASNQ 533


>ref|XP_003518458.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 39-like [Glycine max]
          Length = 636

 Score =  728 bits (1880), Expect = 0.0
 Identities = 397/595 (66%), Positives = 452/595 (75%), Gaps = 3/595 (0%)
 Frame = +1

Query: 1    IHTPIHTTNLSLHYNPNM-GTAGXXXXXXXXXXXXXXXXXXHIPKSYKPISPLYLKRVYL 177
            + TP+   NL+L   P+M G  G                   IPK      PL L R   
Sbjct: 4    LKTPLCYLNLNLPNTPSMAGATGRTLFTLSLSSSSSLTRLSLIPKRVPLPKPLPLFR--- 60

Query: 178  GFRPLCSATTIATNPSLNEAIEPMKHSILLEKLRIRHLKDNTKTPLSRXXXXXXXXXXXX 357
             FRPLCS +  A  P   +A    KHSILLE+LR RHL+D  K   +             
Sbjct: 61   RFRPLCSVSAAA--PEAADA----KHSILLERLRSRHLRDAAKA--APEPRKKEKVAAAA 112

Query: 358  XXXXXXXXXXXXXXXXLNFEELGLSNEVLGALGEMGISVPTEIQCIGVPVVIEGKSVVLG 537
                             +FEELGLS EV+GA+ EMGI VPTEIQ IG+P V+E KSVVLG
Sbjct: 113  AAAAAAAEAKEKKKAVASFEELGLSEEVMGAVREMGIEVPTEIQSIGIPAVLEEKSVVLG 172

Query: 538  SHTGSGKTLAYMLPISQLLRRDEALYGMLMKPRRPRAVVLCPTRELSEQVFRVAKSVSHH 717
            SHTGSGKTLAY+LP++QLLRRDE L G+L+KPRRPRAVVLCPTRELSEQVFRVAKS+SHH
Sbjct: 173  SHTGSGKTLAYLLPLAQLLRRDEQLNGILLKPRRPRAVVLCPTRELSEQVFRVAKSISHH 232

Query: 718  ARFRCTMVSGGGRLRPQEDSLNGPIDMVVGTPGRVLQHIEEGNIVYGDIKYVVLDEADTM 897
            ARFRCTMVSGGGRLRPQEDSLN PID+VVGTPGRVLQHIEEGN+VYGDIKY+VLDEADTM
Sbjct: 233  ARFRCTMVSGGGRLRPQEDSLNNPIDVVVGTPGRVLQHIEEGNMVYGDIKYLVLDEADTM 292

Query: 898  FDRGFGPDIRKFLGPLKNRASKPGGLGFQTVLVTATMTQAVQKLVDEEFEGISHVRTSTL 1077
            FDRGFGPDIRKF+GPLKNRASKP GLGFQT+LVTATMT+AVQ L+DEEF GI H+RTSTL
Sbjct: 293  FDRGFGPDIRKFIGPLKNRASKPDGLGFQTILVTATMTKAVQNLIDEEFLGIVHLRTSTL 352

Query: 1078 HKKIALARHDFIKLSGAENKLEALLQVLEPSLAKGNRVMVFCNTLNSSRAVDHFLSENQI 1257
            HKKI+ ARHDFIKL+G+ENKLEALLQVLEPSLAKGNRVMVFCNTL+SSRAVDHFL ENQI
Sbjct: 353  HKKISSARHDFIKLAGSENKLEALLQVLEPSLAKGNRVMVFCNTLDSSRAVDHFLGENQI 412

Query: 1258 STVNYHGEVPAEQRVENLKKFKSDDGDCPTLVCTDLAARGLDLDVDHVIMFDFPLTSIDY 1437
            S VNYHGEVPAEQRVENL+KFKSD  DCPTLVCTDLAARGLDLDVDHV+MFDFPL SIDY
Sbjct: 413  SAVNYHGEVPAEQRVENLRKFKSDGDDCPTLVCTDLAARGLDLDVDHVVMFDFPLNSIDY 472

Query: 1438 LHRTGRTARMGAKGKVTSLVAKKDHNLATRIEEAMMKNESLESLTVDYIKRDTARSKISQ 1617
            LHRTGRTARMGAKGKVTSLVAKKD +LA++IE+A+ KNESLE++T + ++RD AR++ +Q
Sbjct: 473  LHRTGRTARMGAKGKVTSLVAKKDLDLASKIEDALRKNESLEAITKESVRRDIARTQ-NQ 531

Query: 1618 NTV--KNAKLTKVSSRGTKAVSGRSASVRGKAGTSTRTAGSNSGKDSSAHKSKRG 1776
            +T   K+ +L KVS      V G+S S   + G+    +G  SGK S     K+G
Sbjct: 532  STEKGKSKRLVKVSK-----VMGKSGS---RFGSGNNGSGMKSGKGSPVKSMKKG 578


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