BLASTX nr result

ID: Cnidium21_contig00001112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001112
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002337586.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002314686.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-15
ref|XP_003632307.1| PREDICTED: uncharacterized protein LOC100855...    85   7e-15
ref|XP_002307593.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
gb|ABK96022.1| unknown [Populus trichocarpa]                           83   2e-14

>ref|XP_002337586.1| predicted protein [Populus trichocarpa] gi|222839623|gb|EEE77946.1|
           predicted protein [Populus trichocarpa]
          Length = 260

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 41/65 (63%), Positives = 47/65 (72%), Gaps = 3/65 (4%)
 Frame = -2

Query: 233 TPSSGLNSEVQAGN---ISTACLSWSEMELSEDYTCVISHGPNPKTTRIFDNCIVESCCG 63
           +P S  NS ++  N   +   CLS SEMELSEDYTCVI+HGP P+TT IFDNCIVESCCG
Sbjct: 134 SPKSPANSGMETPNSPRVFAGCLSASEMELSEDYTCVITHGPVPRTTHIFDNCIVESCCG 193

Query: 62  VVALS 48
            V  S
Sbjct: 194 AVGFS 198


>ref|XP_002314686.1| predicted protein [Populus trichocarpa] gi|222863726|gb|EEF00857.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 40/60 (66%), Positives = 47/60 (78%)
 Frame = -2

Query: 227 SSGLNSEVQAGNISTACLSWSEMELSEDYTCVISHGPNPKTTRIFDNCIVESCCGVVALS 48
           +SG+++   +  + T CLS SEMELSEDYTCVI+HGP PKTT IFDNCIVESCCG V  S
Sbjct: 186 NSGMDTP-NSPRVFTGCLSASEMELSEDYTCVITHGPVPKTTHIFDNCIVESCCGAVGFS 244


>ref|XP_003632307.1| PREDICTED: uncharacterized protein LOC100855273 [Vitis vinifera]
           gi|296085215|emb|CBI28710.3| unnamed protein product
           [Vitis vinifera]
          Length = 293

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 46/83 (55%), Positives = 57/83 (68%), Gaps = 5/83 (6%)
 Frame = -2

Query: 236 LTPSSGLNSEVQAGNISTACLSWSEMELSEDYTCVISHGPNPKTTRIFDNCIVESCCGVV 57
           L+P   LNS +Q  +       ++ MELSE+YTCVISHGPNP+TT IFDNCIVESCCGV 
Sbjct: 170 LSPFGSLNSGIQTKDSPRI---FTGMELSEEYTCVISHGPNPRTTHIFDNCIVESCCGVS 226

Query: 56  ALSDLKNEY-----NLSSPSQSF 3
           ALS  +N Y     N +SP ++F
Sbjct: 227 ALS--QNNYCTFPENPNSPPENF 247


>ref|XP_002307593.1| predicted protein [Populus trichocarpa] gi|222857042|gb|EEE94589.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 40/67 (59%), Positives = 50/67 (74%), Gaps = 3/67 (4%)
 Frame = -2

Query: 251 SSDDLLTPSSGLNSEVQAGN---ISTACLSWSEMELSEDYTCVISHGPNPKTTRIFDNCI 81
           S +  L+ S  +NS +QA +   + T C+S SEMELSEDYTCVI+HGPNPKTT IFDNCI
Sbjct: 154 SMNSQLSASGSVNSGIQAKDSPQVFTGCMSMSEMELSEDYTCVITHGPNPKTTHIFDNCI 213

Query: 80  VESCCGV 60
           VE+ C +
Sbjct: 214 VENYCSL 220


>gb|ABK96022.1| unknown [Populus trichocarpa]
          Length = 120

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 39/62 (62%), Positives = 48/62 (77%), Gaps = 3/62 (4%)
 Frame = -2

Query: 236 LTPSSGLNSEVQAGN---ISTACLSWSEMELSEDYTCVISHGPNPKTTRIFDNCIVESCC 66
           L+ S  +NS +QA +   + T C+S SEMELSEDYTCVI+HGPNPKTT IFDNCIVE+ C
Sbjct: 5   LSASGSVNSGIQAKDSPQVFTGCMSMSEMELSEDYTCVITHGPNPKTTHIFDNCIVENYC 64

Query: 65  GV 60
            +
Sbjct: 65  SL 66


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