BLASTX nr result

ID: Cnidium21_contig00001053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001053
         (490 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE67305.1| hypothetical protein OsJ_24532 [Oryza sativa Japo...   207   6e-52
gb|EEC82174.1| hypothetical protein OsI_26284 [Oryza sativa Indi...   207   6e-52
ref|XP_004159225.1| PREDICTED: protein translation factor SUI1 h...   205   3e-51
gb|AFW78548.1| protein translation factor SUI1 [Zea mays]             203   1e-50
gb|ACF06581.1| translational initiation factor eIF1 [Elaeis guin...   203   1e-50

>gb|EEE67305.1| hypothetical protein OsJ_24532 [Oryza sativa Japonica Group]
          Length = 230

 Score =  207 bits (528), Expect = 6e-52
 Identities = 103/118 (87%), Positives = 108/118 (91%), Gaps = 2/118 (1%)
 Frame = -3

Query: 350 CKVHQPSFMSELDIQIPNAFDPFAEATAEDS--SAGSKEYVHIRIQQRNGRKSLTTVQGL 177
           C  HQ SFMS+LDIQIP AFDPFAEA A DS  +AGSK+YVH+RIQQRNGRKSLTTVQGL
Sbjct: 108 CHFHQQSFMSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGL 167

Query: 176 KKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNASTFLIQAGIVKKEHI 3
           KKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKN S FL+QAGIVKKEHI
Sbjct: 168 KKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHI 225


>gb|EEC82174.1| hypothetical protein OsI_26284 [Oryza sativa Indica Group]
          Length = 843

 Score =  207 bits (528), Expect = 6e-52
 Identities = 103/118 (87%), Positives = 108/118 (91%), Gaps = 2/118 (1%)
 Frame = -3

Query: 350  CKVHQPSFMSELDIQIPNAFDPFAEATAEDS--SAGSKEYVHIRIQQRNGRKSLTTVQGL 177
            C  HQ SFMS+LDIQIP AFDPFAEA A DS  +AGSK+YVH+RIQQRNGRKSLTTVQGL
Sbjct: 721  CHFHQQSFMSDLDIQIPTAFDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGL 780

Query: 176  KKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNASTFLIQAGIVKKEHI 3
            KKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKN S FL+QAGIVKKEHI
Sbjct: 781  KKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHI 838


>ref|XP_004159225.1| PREDICTED: protein translation factor SUI1 homolog [Cucumis
           sativus]
          Length = 177

 Score =  205 bits (522), Expect = 3e-51
 Identities = 99/112 (88%), Positives = 107/112 (95%)
 Frame = -3

Query: 338 QPSFMSELDIQIPNAFDPFAEATAEDSSAGSKEYVHIRIQQRNGRKSLTTVQGLKKEFSY 159
           QPSFMSE ++QIP+AFDPFA+A AEDS AG+KEYVH+RIQQRNGRKS TTVQGLKKEFSY
Sbjct: 61  QPSFMSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSPTTVQGLKKEFSY 120

Query: 158 NKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNASTFLIQAGIVKKEHI 3
           NKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKN STFL+QAGIVKKE+I
Sbjct: 121 NKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENI 172


>gb|AFW78548.1| protein translation factor SUI1 [Zea mays]
          Length = 185

 Score =  203 bits (516), Expect = 1e-50
 Identities = 99/117 (84%), Positives = 109/117 (93%), Gaps = 2/117 (1%)
 Frame = -3

Query: 347 KVHQPSFMSELDIQIPNAFDPFAEATAEDSSAG--SKEYVHIRIQQRNGRKSLTTVQGLK 174
           K  QPSFMS+LD+Q+P+AFDPFAEA AEDS AG  +K+YVH+RIQQRNGRKSLTTVQGLK
Sbjct: 64  KPQQPSFMSDLDVQLPSAFDPFAEANAEDSGAGPGTKDYVHVRIQQRNGRKSLTTVQGLK 123

Query: 173 KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNASTFLIQAGIVKKEHI 3
           KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKN +TFL+QAGI KKE+I
Sbjct: 124 KEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIAKKENI 180


>gb|ACF06581.1| translational initiation factor eIF1 [Elaeis guineensis]
          Length = 113

 Score =  203 bits (516), Expect = 1e-50
 Identities = 97/108 (89%), Positives = 104/108 (96%)
 Frame = -3

Query: 326 MSELDIQIPNAFDPFAEATAEDSSAGSKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKIL 147
           MS+LD+QIP AFDPFAEA A+DS AG+KEYVH+RIQQRNGRKSLTTVQGLKKEFSYNKIL
Sbjct: 1   MSDLDVQIPTAFDPFAEANADDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKIL 60

Query: 146 KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNASTFLIQAGIVKKEHI 3
           KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKN +TFL+QAGIVKKEHI
Sbjct: 61  KDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVATFLVQAGIVKKEHI 108


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