BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001050
         (2429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284518.1| PREDICTED: ATP-dependent Clp protease ATP-bi...  1355   0.0  
sp|P31542.1|CLPAB_SOLLC RecName: Full=ATP-dependent Clp protease...  1341   0.0  
ref|XP_004152900.1| PREDICTED: chaperone protein ClpC, chloropla...  1338   0.0  
emb|CAN78847.1| hypothetical protein VITISV_010724 [Vitis vinifera]  1335   0.0  
sp|P31541.1|CLPAA_SOLLC RecName: Full=ATP-dependent Clp protease...  1332   0.0  

>ref|XP_002284518.1| PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpA
            homolog CD4A, chloroplastic-like [Vitis vinifera]
          Length = 923

 Score = 1355 bits (3508), Expect = 0.0
 Identities = 706/782 (90%), Positives = 721/782 (92%), Gaps = 1/782 (0%)
 Frame = +1

Query: 1    MGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXX 180
            MGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGS      
Sbjct: 142  MGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLG 201

Query: 181  XXXXXXXVAARVLENLGADPNNIRTQVIRMVGESVEA-GATVGGGSSGNKMPTLEEYGTN 357
                   VAARVLENLGADP+NIRTQVIRMVGES EA GA VGGG++GNKMPTLEEYGTN
Sbjct: 202  LLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEAVGAGVGGGTTGNKMPTLEEYGTN 261

Query: 358  LTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIATGD 537
            LTKLAEEGKLDPVVGRQ QIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA GD
Sbjct: 262  LTKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGD 321

Query: 538  VPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLXXXXX 717
            VPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTL     
Sbjct: 322  VPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGA 381

Query: 718  XXXXXXXXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQ 897
                      LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQ
Sbjct: 382  AEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQ 441

Query: 898  ILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQL 1077
            ILKGLRERYEIHHKLRYTDEALVSAA+LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQL
Sbjct: 442  ILKGLRERYEIHHKLRYTDEALVSAARLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQL 501

Query: 1078 PEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRETDLKTQISALVDRNKEMTKAETE 1257
            PEEARELEKELRQITKEKNEAVR QDFEKAGELRDRE DLK QIS L+D+ KEMTKAETE
Sbjct: 502  PEEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMDLKAQISTLIDKGKEMTKAETE 561

Query: 1258 AGDEGPMVTEVDIQHIVSSWTGIPVDKVSSDESDKLLNMEETLHTRIIGQDEAVKAISRA 1437
            AGD GPMVTEVDIQHIVS+WTGIPV+KVS+DESD+LL MEETLH R+IGQDEAVKAISRA
Sbjct: 562  AGDIGPMVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHRRVIGQDEAVKAISRA 621

Query: 1438 IRRARVGLKNPNRPIASFIFSGPTGVGKSELAKTLATYYFGSEEAMIRLDMSEFMERHTV 1617
            IRRARVGLKNPNRPIASFIFSGPTGVGKSELAK LA YYFGSEEAMIRLDMSEFMERHTV
Sbjct: 622  IRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTV 681

Query: 1618 SKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSK 1797
            SKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSK
Sbjct: 682  SKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSK 741

Query: 1798 GRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPE 1977
            GRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPE
Sbjct: 742  GRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPE 801

Query: 1978 FLNRLDEMIVFRQLTKLEVKEIAAIMLKEVFERLKSKDIELQVTERFTDRVVDEGYNPSY 2157
            FLNRLDEMIVFRQLTKLEVK+IA IMLKEVFERLK+KDIELQVTERF DRVVDEGYNPSY
Sbjct: 802  FLNRLDEMIVFRQLTKLEVKDIADIMLKEVFERLKAKDIELQVTERFRDRVVDEGYNPSY 861

Query: 2158 GARPLRRAIMRLLEDSMAEKMLSREIKEXXXXXXXXXXXXXXTVLNGSSGAPPESLPEPI 2337
            GARPLRRAIMRLLEDSMAEKML+REIKE              TVLNGSSGAPPESLPE +
Sbjct: 862  GARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPPESLPEAM 921

Query: 2338 AV 2343
             V
Sbjct: 922  PV 923


>sp|P31542.1|CLPAB_SOLLC RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
            homolog CD4B, chloroplastic; Flags: Precursor
            gi|170435|gb|AAA34161.1| ATP-dependent protease (CD4B)
            [Solanum lycopersicum]
          Length = 923

 Score = 1341 bits (3471), Expect = 0.0
 Identities = 698/782 (89%), Positives = 717/782 (91%), Gaps = 1/782 (0%)
 Frame = +1

Query: 1    MGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXX 180
            MGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGS      
Sbjct: 142  MGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLG 201

Query: 181  XXXXXXXVAARVLENLGADPNNIRTQVIRMVGESVEA-GATVGGGSSGNKMPTLEEYGTN 357
                   VAARVLENLGADP+NIRTQVIRMVGES EA GA+VGGG+SG KMPTLEEYGTN
Sbjct: 202  LLREGEGVAARVLENLGADPSNIRTQVIRMVGESNEAVGASVGGGTSGQKMPTLEEYGTN 261

Query: 358  LTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIATGD 537
            LTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA GD
Sbjct: 262  LTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGD 321

Query: 538  VPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLXXXXX 717
            VPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTL     
Sbjct: 322  VPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGA 381

Query: 718  XXXXXXXXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQ 897
                      LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEP+VDETIQ
Sbjct: 382  AEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPTVDETIQ 441

Query: 898  ILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQL 1077
            ILKGLRERYEIHHKLRYTDE LV+AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQL
Sbjct: 442  ILKGLRERYEIHHKLRYTDEDLVAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQL 501

Query: 1078 PEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRETDLKTQISALVDRNKEMTKAETE 1257
            PEEA+ELEKELRQITKEKNEAVRGQDFEKAGELRDRE DLK QI+AL+D+NKE++KAE+E
Sbjct: 502  PEEAKELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQITALIDKNKEVSKAESE 561

Query: 1258 AGDEGPMVTEVDIQHIVSSWTGIPVDKVSSDESDKLLNMEETLHTRIIGQDEAVKAISRA 1437
            A D GP+VTE DIQHIVSSWTGIPV+KVS+DESD+LL MEETLHTRIIGQDEAVKAISRA
Sbjct: 562  AADTGPLVTEADIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHTRIIGQDEAVKAISRA 621

Query: 1438 IRRARVGLKNPNRPIASFIFSGPTGVGKSELAKTLATYYFGSEEAMIRLDMSEFMERHTV 1617
            IRRARVGLKNPNRPIASFIFSGPTGVGKSELAK LA YYFGSEEAMIRLDMSEFMERHTV
Sbjct: 622  IRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTV 681

Query: 1618 SKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSK 1797
            SKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSK
Sbjct: 682  SKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSK 741

Query: 1798 GRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPE 1977
            GRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD DEKDSSYNRIKSLVTEELKQYFRPE
Sbjct: 742  GRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDLDEKDSSYNRIKSLVTEELKQYFRPE 801

Query: 1978 FLNRLDEMIVFRQLTKLEVKEIAAIMLKEVFERLKSKDIELQVTERFTDRVVDEGYNPSY 2157
            FLNRLDEMIVFRQLTKLEVKEIA IMLKEVFERLK K+IELQVTERF DRVVDEGYNPSY
Sbjct: 802  FLNRLDEMIVFRQLTKLEVKEIADIMLKEVFERLKVKEIELQVTERFRDRVVDEGYNPSY 861

Query: 2158 GARPLRRAIMRLLEDSMAEKMLSREIKEXXXXXXXXXXXXXXTVLNGSSGAPPESLPEPI 2337
            GARPLRRAIMRLLEDSMAEKML+ EIKE              TVLNGSSG P +  PEPI
Sbjct: 862  GARPLRRAIMRLLEDSMAEKMLANEIKEGDSVIVDVDSDGNVTVLNGSSGTPSDPAPEPI 921

Query: 2338 AV 2343
             V
Sbjct: 922  PV 923


>ref|XP_004152900.1| PREDICTED: chaperone protein ClpC, chloroplastic-like [Cucumis
            sativus] gi|449505877|ref|XP_004162592.1| PREDICTED:
            chaperone protein ClpC, chloroplastic-like [Cucumis
            sativus]
          Length = 924

 Score = 1338 bits (3464), Expect = 0.0
 Identities = 696/782 (89%), Positives = 717/782 (91%), Gaps = 1/782 (0%)
 Frame = +1

Query: 1    MGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXX 180
            MGINLKDARVEVEKIIGRG GFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGS      
Sbjct: 143  MGINLKDARVEVEKIIGRGGGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLG 202

Query: 181  XXXXXXXVAARVLENLGADPNNIRTQVIRMVGESVEA-GATVGGGSSGNKMPTLEEYGTN 357
                   VAARVLENLGADP NIRTQVIRMVGES EA GA VGGGSSGNKMPTLEEYGTN
Sbjct: 203  LLREGEGVAARVLENLGADPANIRTQVIRMVGESTEAVGAGVGGGSSGNKMPTLEEYGTN 262

Query: 358  LTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIATGD 537
            LTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA GD
Sbjct: 263  LTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGD 322

Query: 538  VPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLXXXXX 717
            VPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTL     
Sbjct: 323  VPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGA 382

Query: 718  XXXXXXXXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQ 897
                      LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQ
Sbjct: 383  AEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQ 442

Query: 898  ILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQL 1077
            ILKGLRERYEIHHKLRYTDEAL +AAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQL
Sbjct: 443  ILKGLRERYEIHHKLRYTDEALEAAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQL 502

Query: 1078 PEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRETDLKTQISALVDRNKEMTKAETE 1257
            PEEA+E+EKELRQITKEKN+AVR QDFEKAGELRDRE +LK +ISAL+D+ KEM+KAE+E
Sbjct: 503  PEEAKEVEKELRQITKEKNDAVRSQDFEKAGELRDREMELKAKISALIDKGKEMSKAESE 562

Query: 1258 AGDEGPMVTEVDIQHIVSSWTGIPVDKVSSDESDKLLNMEETLHTRIIGQDEAVKAISRA 1437
            AGD GP+VTEVDIQHIVSSWTGIPV+KVS+DESD+LL MEETLH R+IGQDEAVKAISRA
Sbjct: 563  AGDVGPVVTEVDIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHRRVIGQDEAVKAISRA 622

Query: 1438 IRRARVGLKNPNRPIASFIFSGPTGVGKSELAKTLATYYFGSEEAMIRLDMSEFMERHTV 1617
            IRRARVGLKNPNRPIASFIFSGPTGVGKSELAK LA YYFGSEEAMIRLDMSEFMERHTV
Sbjct: 623  IRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTV 682

Query: 1618 SKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSK 1797
            SKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSK
Sbjct: 683  SKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSK 742

Query: 1798 GRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPE 1977
            GRTVDFKNTLLIMTSNVGSSVIEKGGRR+GFDLDYDEKDSSY RIKSLVTEELKQYFRPE
Sbjct: 743  GRTVDFKNTLLIMTSNVGSSVIEKGGRRMGFDLDYDEKDSSYTRIKSLVTEELKQYFRPE 802

Query: 1978 FLNRLDEMIVFRQLTKLEVKEIAAIMLKEVFERLKSKDIELQVTERFTDRVVDEGYNPSY 2157
            FLNRLDEMIVFRQLTKLEVKEIA IMLKEVF+RLK K+I+LQVTERF DRVVDEGYNPSY
Sbjct: 803  FLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKGKEIDLQVTERFRDRVVDEGYNPSY 862

Query: 2158 GARPLRRAIMRLLEDSMAEKMLSREIKEXXXXXXXXXXXXXXTVLNGSSGAPPESLPEPI 2337
            GARPLRRAIMRLLEDSMAEKML+REIKE              TVLNGSSGA PESL +PI
Sbjct: 863  GARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAAPESLADPI 922

Query: 2338 AV 2343
             V
Sbjct: 923  PV 924


>emb|CAN78847.1| hypothetical protein VITISV_010724 [Vitis vinifera]
          Length = 890

 Score = 1335 bits (3455), Expect = 0.0
 Identities = 696/781 (89%), Positives = 712/781 (91%)
 Frame = +1

Query: 1    MGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXX 180
            MGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGS      
Sbjct: 116  MGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLG 175

Query: 181  XXXXXXXVAARVLENLGADPNNIRTQVIRMVGESVEAGATVGGGSSGNKMPTLEEYGTNL 360
                   VAARVLENLGADP+NIRTQ  + VG      A VGGG++GNKMPTLEEYGTNL
Sbjct: 176  LLREGEGVAARVLENLGADPSNIRTQASKAVG------AGVGGGTTGNKMPTLEEYGTNL 229

Query: 361  TKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIATGDV 540
            TKLAEEGKLDPVVGRQ QIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA GDV
Sbjct: 230  TKLAEEGKLDPVVGRQQQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDV 289

Query: 541  PETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLXXXXXX 720
            PETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTL      
Sbjct: 290  PETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGAA 349

Query: 721  XXXXXXXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQI 900
                     LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQI
Sbjct: 350  EGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQI 409

Query: 901  LKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLP 1080
             KGLRERYEIHHKLRYTDEALVSAA+LSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLP
Sbjct: 410  XKGLRERYEIHHKLRYTDEALVSAARLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQLP 469

Query: 1081 EEARELEKELRQITKEKNEAVRGQDFEKAGELRDRETDLKTQISALVDRNKEMTKAETEA 1260
            EEARELEKELRQITKEKNEAVR QDFEKAGELRDRE DLK QIS L+D+ KEMTKAETEA
Sbjct: 470  EEARELEKELRQITKEKNEAVRSQDFEKAGELRDREMDLKAQISTLIDKGKEMTKAETEA 529

Query: 1261 GDEGPMVTEVDIQHIVSSWTGIPVDKVSSDESDKLLNMEETLHTRIIGQDEAVKAISRAI 1440
            GD GPMVTEVDIQHIVS+WTGIPV+KVS+DESD+LL MEETLH R+IGQDEAVKAISRAI
Sbjct: 530  GDIGPMVTEVDIQHIVSAWTGIPVEKVSTDESDRLLKMEETLHRRVIGQDEAVKAISRAI 589

Query: 1441 RRARVGLKNPNRPIASFIFSGPTGVGKSELAKTLATYYFGSEEAMIRLDMSEFMERHTVS 1620
            RRARVGLKNPNRPIASFIFSGPTGVGKSELAK LA YYFGSEEAMIRLDMSEFMERHTVS
Sbjct: 590  RRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAAYYFGSEEAMIRLDMSEFMERHTVS 649

Query: 1621 KLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKG 1800
            KLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKG
Sbjct: 650  KLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDSKG 709

Query: 1801 RTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEF 1980
            RTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEF
Sbjct: 710  RTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRPEF 769

Query: 1981 LNRLDEMIVFRQLTKLEVKEIAAIMLKEVFERLKSKDIELQVTERFTDRVVDEGYNPSYG 2160
            LNRLDEMIVFRQLTKLEVK+IA IMLKEVFERLK+KDIELQVTERF DRVVDEGYNPSYG
Sbjct: 770  LNRLDEMIVFRQLTKLEVKDIADIMLKEVFERLKAKDIELQVTERFRDRVVDEGYNPSYG 829

Query: 2161 ARPLRRAIMRLLEDSMAEKMLSREIKEXXXXXXXXXXXXXXTVLNGSSGAPPESLPEPIA 2340
            ARPLRRAIMRLLEDSMAEKML+REIKE              TVLNGSSGAPPESLPE + 
Sbjct: 830  ARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVDSDGNVTVLNGSSGAPPESLPEAMP 889

Query: 2341 V 2343
            V
Sbjct: 890  V 890


>sp|P31541.1|CLPAA_SOLLC RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA
            homolog CD4A, chloroplastic; Flags: Precursor
            gi|170433|gb|AAA34160.1| ATP-dependent protease (CD4A)
            [Solanum lycopersicum]
          Length = 926

 Score = 1332 bits (3446), Expect = 0.0
 Identities = 695/783 (88%), Positives = 718/783 (91%), Gaps = 2/783 (0%)
 Frame = +1

Query: 1    MGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSXXXXXX 180
            MGINLKDARVEVEKIIGRGSGF+AVEIPFTPRAKRVLELSLEEARQLGHNYIGS      
Sbjct: 144  MGINLKDARVEVEKIIGRGSGFIAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLG 203

Query: 181  XXXXXXXVAARVLENLGADPNNIRTQVIRMVGESVEA-GATVGGGSSGNKMPTLEEYGTN 357
                   VAARVLENLGADP NIRTQVIRMVGES EA GA+VGGG+SG KMPTLEEYGTN
Sbjct: 204  LLREGEGVAARVLENLGADPTNIRTQVIRMVGESSEAVGASVGGGTSGLKMPTLEEYGTN 263

Query: 358  LTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIATGD 537
            LTKLAEEGKLDPVVGRQ QIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIA GD
Sbjct: 264  LTKLAEEGKLDPVVGRQAQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGD 323

Query: 538  VPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLXXXXX 717
            VPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTL     
Sbjct: 324  VPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLMEEIKQSDEIILFIDEVHTLIGAGA 383

Query: 718  XXXXXXXXXXLKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQ 897
                      LKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQ
Sbjct: 384  AEGAIDAANILKPALARGELQCIGATTLDEYRKHIEKDPALERRFQPVKVPEPSVDETIQ 443

Query: 898  ILKGLRERYEIHHKLRYTDEALVSAAQLSYQYISDRFLPDKAIDLIDEAGSRVRLRHAQL 1077
            ILKGLRERYEIHHKL YTDEA+ +AA+LS+QYISDRFLPDKAIDLIDEAGSRVRLRHAQL
Sbjct: 444  ILKGLRERYEIHHKLHYTDEAIEAAAKLSHQYISDRFLPDKAIDLIDEAGSRVRLRHAQL 503

Query: 1078 PEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRETDLKTQISALVDRNKEMTKAETE 1257
            PEEARELEKELRQITKEKNEAVRGQDFEKAGELRDRE DLK QISAL+D+NKE +KAE+E
Sbjct: 504  PEEARELEKELRQITKEKNEAVRGQDFEKAGELRDREMDLKAQISALIDKNKEKSKAESE 563

Query: 1258 AGDE-GPMVTEVDIQHIVSSWTGIPVDKVSSDESDKLLNMEETLHTRIIGQDEAVKAISR 1434
            AGD  GP+VTE DIQHIVSSWTGIPV+KVS+DESD+LL MEETLHTR+IGQDEAVKAISR
Sbjct: 564  AGDAAGPIVTEADIQHIVSSWTGIPVEKVSTDESDRLLKMEETLHTRVIGQDEAVKAISR 623

Query: 1435 AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKTLATYYFGSEEAMIRLDMSEFMERHT 1614
            AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAK+LATYYFGSEEAMIRLDMSEFMERHT
Sbjct: 624  AIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKSLATYYFGSEEAMIRLDMSEFMERHT 683

Query: 1615 VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 1794
            VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS
Sbjct: 684  VSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIEKAHPDVFNMMLQILEDGRLTDS 743

Query: 1795 KGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDEKDSSYNRIKSLVTEELKQYFRP 1974
            KGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLD+DEKDSSYNRIKSLVTEELKQYFRP
Sbjct: 744  KGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDFDEKDSSYNRIKSLVTEELKQYFRP 803

Query: 1975 EFLNRLDEMIVFRQLTKLEVKEIAAIMLKEVFERLKSKDIELQVTERFTDRVVDEGYNPS 2154
            EFLNRL EMIVFRQLTKLEVKEIA IMLKEVF RLK+K+IELQVTERF DRVVDEGYNPS
Sbjct: 804  EFLNRLSEMIVFRQLTKLEVKEIADIMLKEVFVRLKNKEIELQVTERFRDRVVDEGYNPS 863

Query: 2155 YGARPLRRAIMRLLEDSMAEKMLSREIKEXXXXXXXXXXXXXXTVLNGSSGAPPESLPEP 2334
            YGARPLRRAIMRLLEDSMAEKML+ EIKE              TVLNG+SGAP +S PEP
Sbjct: 864  YGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIVDVDSDGNVTVLNGTSGAPSDSAPEP 923

Query: 2335 IAV 2343
            I V
Sbjct: 924  ILV 926