BLASTX nr result

ID: Cnidium21_contig00001037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001037
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK45138.1| unknown [Medicago truncatula]                          262   5e-68
ref|XP_003632111.1| PREDICTED: 60S ribosomal protein L12-like [V...   260   1e-67
ref|XP_002530279.1| 60S ribosomal protein L12, putative [Ricinus...   259   2e-67
ref|XP_003606385.1| 60S ribosomal protein L12 [Medicago truncatu...   259   3e-67
ref|XP_002281255.1| PREDICTED: 60S ribosomal protein L12 [Vitis ...   258   7e-67

>gb|AFK45138.1| unknown [Medicago truncatula]
          Length = 166

 Score =  262 bits (669), Expect = 5e-68
 Identities = 132/139 (94%), Positives = 136/139 (97%)
 Frame = +3

Query: 3   LAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALK 182
           LAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKV+VVPSAAALVIKALK
Sbjct: 28  LAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALK 87

Query: 183 EPERDRKKTKNIKHTGNISLDDVIEIAKIMRPRSMAKELQGTVKEILGTCVSVGCTVDGK 362
           EPERDRKKTKNIKH GNISLDDVIEIAKIM+PRSMAKEL GTVKEILGTCVSVGCTVDGK
Sbjct: 88  EPERDRKKTKNIKHNGNISLDDVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGK 147

Query: 363 DPKDLQEEIDGGDVEIPLD 419
           DPKDLQ+EID GDVEIPL+
Sbjct: 148 DPKDLQQEIDDGDVEIPLE 166


>ref|XP_003632111.1| PREDICTED: 60S ribosomal protein L12-like [Vitis vinifera]
          Length = 166

 Score =  260 bits (665), Expect = 1e-67
 Identities = 132/139 (94%), Positives = 135/139 (97%)
 Frame = +3

Query: 3   LAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALK 182
           LAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALK
Sbjct: 28  LAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALK 87

Query: 183 EPERDRKKTKNIKHTGNISLDDVIEIAKIMRPRSMAKELQGTVKEILGTCVSVGCTVDGK 362
           EPERDRKKTKNIKH GNISLDDVIEIAKIMRPRSMAK+L G+VKEILGTCVSVGCTVDGK
Sbjct: 88  EPERDRKKTKNIKHNGNISLDDVIEIAKIMRPRSMAKDLSGSVKEILGTCVSVGCTVDGK 147

Query: 363 DPKDLQEEIDGGDVEIPLD 419
           DPKDLQ+EI  GDVEIPLD
Sbjct: 148 DPKDLQQEIADGDVEIPLD 166


>ref|XP_002530279.1| 60S ribosomal protein L12, putative [Ricinus communis]
           gi|223530177|gb|EEF32086.1| 60S ribosomal protein L12,
           putative [Ricinus communis]
          Length = 166

 Score =  259 bits (663), Expect = 2e-67
 Identities = 129/139 (92%), Positives = 136/139 (97%)
 Frame = +3

Query: 3   LAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALK 182
           LAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKV+VVPSAAALVIKALK
Sbjct: 28  LAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVTVVPSAAALVIKALK 87

Query: 183 EPERDRKKTKNIKHTGNISLDDVIEIAKIMRPRSMAKELQGTVKEILGTCVSVGCTVDGK 362
           EPERDRKKTKNIKH+GNISLDDVIEIAK+M+PRSMAK+L GTVKEILGTCVSVGCTVDGK
Sbjct: 88  EPERDRKKTKNIKHSGNISLDDVIEIAKVMKPRSMAKDLSGTVKEILGTCVSVGCTVDGK 147

Query: 363 DPKDLQEEIDGGDVEIPLD 419
           DPKDLQ+EI  GDVE+PLD
Sbjct: 148 DPKDLQQEITDGDVEVPLD 166


>ref|XP_003606385.1| 60S ribosomal protein L12 [Medicago truncatula]
           gi|217071520|gb|ACJ84120.1| unknown [Medicago
           truncatula] gi|217075190|gb|ACJ85955.1| unknown
           [Medicago truncatula] gi|355507440|gb|AES88582.1| 60S
           ribosomal protein L12 [Medicago truncatula]
           gi|388514003|gb|AFK45063.1| unknown [Medicago
           truncatula]
          Length = 166

 Score =  259 bits (662), Expect = 3e-67
 Identities = 131/139 (94%), Positives = 135/139 (97%)
 Frame = +3

Query: 3   LAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALK 182
           LAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKV+VVPSAAALVIKALK
Sbjct: 28  LAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVAVVPSAAALVIKALK 87

Query: 183 EPERDRKKTKNIKHTGNISLDDVIEIAKIMRPRSMAKELQGTVKEILGTCVSVGCTVDGK 362
           EPERDRKKTKNIKH GNISLDDVIEIAKIM+PRSMAKEL GTVKEILGTCVSVGCTVDGK
Sbjct: 88  EPERDRKKTKNIKHNGNISLDDVIEIAKIMKPRSMAKELAGTVKEILGTCVSVGCTVDGK 147

Query: 363 DPKDLQEEIDGGDVEIPLD 419
           DPKDLQ+EI+ GDVEIP D
Sbjct: 148 DPKDLQQEINDGDVEIPQD 166


>ref|XP_002281255.1| PREDICTED: 60S ribosomal protein L12 [Vitis vinifera]
           gi|147835636|emb|CAN66258.1| hypothetical protein
           VITISV_001237 [Vitis vinifera]
          Length = 166

 Score =  258 bits (659), Expect = 7e-67
 Identities = 131/139 (94%), Positives = 134/139 (96%)
 Frame = +3

Query: 3   LAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALK 182
           LAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALK
Sbjct: 28  LAPKIGPLGLSPKKIGEDIAKETAKDWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALK 87

Query: 183 EPERDRKKTKNIKHTGNISLDDVIEIAKIMRPRSMAKELQGTVKEILGTCVSVGCTVDGK 362
           EPERDRKKTKNIKH GNISLDDVIEIAKIMRPRSMAK+L G+VKEILGTCVSVGCTVDGK
Sbjct: 88  EPERDRKKTKNIKHNGNISLDDVIEIAKIMRPRSMAKDLSGSVKEILGTCVSVGCTVDGK 147

Query: 363 DPKDLQEEIDGGDVEIPLD 419
           DPKDLQ+EI  GDVEIP D
Sbjct: 148 DPKDLQQEIADGDVEIPQD 166


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