BLASTX nr result

ID: Cnidium21_contig00001029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001029
         (704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273221.1| PREDICTED: U-box domain-containing protein 4...    75   4e-19
ref|XP_002333360.1| predicted protein [Populus trichocarpa] gi|2...    79   6e-19
emb|CBI40737.3| unnamed protein product [Vitis vinifera]               74   1e-18
ref|XP_002510699.1| ubiquitin-protein ligase, putative [Ricinus ...    79   3e-18
ref|XP_002306986.1| predicted protein [Populus trichocarpa] gi|2...    75   8e-17

>ref|XP_002273221.1| PREDICTED: U-box domain-containing protein 43 [Vitis vinifera]
          Length = 813

 Score = 75.5 bits (184), Expect(2) = 4e-19
 Identities = 37/55 (67%), Positives = 45/55 (81%)
 Frame = +3

Query: 66  QSVITGLCKVHRGRGSLKCTFCLVNGHVLEKLVALLDHTNGKVVEASLAAMSTFL 230
           Q VITGLC++HRG  SLK +FCL+ G  +EKLVALLDH N +VVEA+LAA+ST L
Sbjct: 658 QPVITGLCRLHRGTCSLKDSFCLLEGQAVEKLVALLDHQNEQVVEAALAAISTLL 712



 Score = 45.1 bits (105), Expect(2) = 4e-19
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = +1

Query: 1   NLSQESKNLTKLPESPSPGFCLNL 72
           NLSQESKNLTKLPE P+PGFC ++
Sbjct: 628 NLSQESKNLTKLPELPAPGFCASI 651


>ref|XP_002333360.1| predicted protein [Populus trichocarpa] gi|222836311|gb|EEE74732.1|
           predicted protein [Populus trichocarpa]
          Length = 813

 Score = 79.3 bits (194), Expect(2) = 6e-19
 Identities = 39/55 (70%), Positives = 46/55 (83%)
 Frame = +3

Query: 66  QSVITGLCKVHRGRGSLKCTFCLVNGHVLEKLVALLDHTNGKVVEASLAAMSTFL 230
           Q VITGLC++HRG  SLK +FCL+ G  +EKLVALLDHTN KVVEA+LAA+ST L
Sbjct: 658 QPVITGLCRLHRGTCSLKDSFCLLEGQAVEKLVALLDHTNEKVVEAALAAISTLL 712



 Score = 40.8 bits (94), Expect(2) = 6e-19
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = +1

Query: 1   NLSQESKNLTKLPESPSPGFCLNL 72
           NLSQESKNLT+LPE P P FC ++
Sbjct: 628 NLSQESKNLTRLPELPPPAFCASI 651


>emb|CBI40737.3| unnamed protein product [Vitis vinifera]
          Length = 626

 Score = 73.9 bits (180), Expect(2) = 1e-18
 Identities = 36/53 (67%), Positives = 44/53 (83%)
 Frame = +3

Query: 66  QSVITGLCKVHRGRGSLKCTFCLVNGHVLEKLVALLDHTNGKVVEASLAAMST 224
           Q VITGLC++HRG  SLK +FCL+ G  +EKLVALLDH N +VVEA+LAA+ST
Sbjct: 508 QPVITGLCRLHRGTCSLKDSFCLLEGQAVEKLVALLDHQNEQVVEAALAAIST 560



 Score = 45.1 bits (105), Expect(2) = 1e-18
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = +1

Query: 1   NLSQESKNLTKLPESPSPGFCLNL 72
           NLSQESKNLTKLPE P+PGFC ++
Sbjct: 478 NLSQESKNLTKLPELPAPGFCASI 501


>ref|XP_002510699.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551400|gb|EEF52886.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 813

 Score = 79.0 bits (193), Expect(2) = 3e-18
 Identities = 39/58 (67%), Positives = 46/58 (79%)
 Frame = +3

Query: 57  FLSQSVITGLCKVHRGRGSLKCTFCLVNGHVLEKLVALLDHTNGKVVEASLAAMSTFL 230
           F    VITGLC++HRG  SL+ TFCL+ G  +EKLVALLDHTN KVVEA+LAA+ST L
Sbjct: 655 FSKPPVITGLCRLHRGTCSLRDTFCLLEGQAVEKLVALLDHTNEKVVEAALAAISTLL 712



 Score = 38.9 bits (89), Expect(2) = 3e-18
 Identities = 17/24 (70%), Positives = 19/24 (79%)
 Frame = +1

Query: 1   NLSQESKNLTKLPESPSPGFCLNL 72
           NLSQESKNLTKLP    PGFC ++
Sbjct: 628 NLSQESKNLTKLPHFSPPGFCASV 651


>ref|XP_002306986.1| predicted protein [Populus trichocarpa] gi|222856435|gb|EEE93982.1|
           predicted protein [Populus trichocarpa]
          Length = 817

 Score = 75.5 bits (184), Expect(2) = 8e-17
 Identities = 38/58 (65%), Positives = 45/58 (77%)
 Frame = +3

Query: 57  FLSQSVITGLCKVHRGRGSLKCTFCLVNGHVLEKLVALLDHTNGKVVEASLAAMSTFL 230
           F  Q VI+G C++H G  SLK TFCL+ G  +EKLVALLDHTN KVVEA+LAA+ST L
Sbjct: 655 FSKQPVISGSCRLHGGTCSLKETFCLLEGQAVEKLVALLDHTNEKVVEAALAAISTLL 712



 Score = 37.4 bits (85), Expect(2) = 8e-17
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = +1

Query: 1   NLSQESKNLTKLPESPSPGFCLNL 72
           NL+QESKNLT+LPE P P  C ++
Sbjct: 628 NLAQESKNLTRLPELPPPNLCASI 651


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