BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001025
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532897.1| ubiquitin-protein ligase, putative [Ricinus ...    69   2e-24
ref|XP_004136686.1| PREDICTED: probable ubiquitin conjugation fa...    70   6e-22
ref|XP_003633847.1| PREDICTED: probable ubiquitin conjugation fa...    68   2e-21
ref|XP_002324089.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-19
ref|NP_568313.2| putative ubiquitin conjugation factor E4 [Arabi...    65   1e-18

>ref|XP_002532897.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527331|gb|EEF29477.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 1031

 Score = 69.3 bits (168), Expect(2) = 2e-24
 Identities = 34/42 (80%), Positives = 37/42 (88%)
 Frame = +3

Query: 3   LLKNTNTRENVLQYLAEVITKNKSRAHIQVDPISYVSSGMFV 128
           LLKN +TRENVLQYLAEVI +N SRAHIQVDP+S  SSGMFV
Sbjct: 318 LLKNGDTRENVLQYLAEVINRNSSRAHIQVDPLSCASSGMFV 359



 Score = 68.2 bits (165), Expect(2) = 2e-24
 Identities = 34/49 (69%), Positives = 40/49 (81%)
 Frame = +2

Query: 161 LTALHAWSEEVA*WIIKNNHGKGDVNGTNNDGENRLLQSQEASSSGSNT 307
           LTALHA SEEV  W+ K NHGK +V+  ++DGENRLLQSQEA+SSGS T
Sbjct: 399 LTALHASSEEVTEWMNKGNHGKTEVSVQSSDGENRLLQSQEATSSGSGT 447


>ref|XP_004136686.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Cucumis
           sativus] gi|449494681|ref|XP_004159617.1| PREDICTED:
           probable ubiquitin conjugation factor E4-like [Cucumis
           sativus]
          Length = 1043

 Score = 70.5 bits (171), Expect(2) = 6e-22
 Identities = 34/42 (80%), Positives = 37/42 (88%)
 Frame = +3

Query: 3   LLKNTNTRENVLQYLAEVITKNKSRAHIQVDPISYVSSGMFV 128
           LLKNT TRENVL+YLAEVI +N SRAHIQVDP+S  SSGMFV
Sbjct: 323 LLKNTETRENVLEYLAEVINRNSSRAHIQVDPLSCASSGMFV 364



 Score = 58.5 bits (140), Expect(2) = 6e-22
 Identities = 34/58 (58%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
 Frame = +2

Query: 140 CYAAPLEL---TALHAWSEEVA*WIIKNNHGKGDVNGTNNDGENRLLQSQEASSSGSN 304
           CY+  LEL   TALHA SEEV  WI      + D  G ++D E+RLLQSQEASSSGSN
Sbjct: 394 CYSNRLELRGLTALHASSEEVTEWINNGTQLRTDNPGQSSDSESRLLQSQEASSSGSN 451


>ref|XP_003633847.1| PREDICTED: probable ubiquitin conjugation factor E4-like [Vitis
           vinifera] gi|296082973|emb|CBI22274.3| unnamed protein
           product [Vitis vinifera]
          Length = 1037

 Score = 67.8 bits (164), Expect(2) = 2e-21
 Identities = 33/42 (78%), Positives = 37/42 (88%)
 Frame = +3

Query: 3   LLKNTNTRENVLQYLAEVITKNKSRAHIQVDPISYVSSGMFV 128
           LLKN +TRE+VL+YLAEVI KN SRAHIQVDP+S  SSGMFV
Sbjct: 317 LLKNADTRESVLKYLAEVINKNSSRAHIQVDPLSCASSGMFV 358



 Score = 59.3 bits (142), Expect(2) = 2e-21
 Identities = 32/51 (62%), Positives = 39/51 (76%)
 Frame = +2

Query: 161 LTALHAWSEEVA*WIIKNNHGKGDVNGTNNDGENRLLQSQEASSSGSNTGG 313
           LTALHA SEEVA WI K++ G  + +   +DGE+RLLQSQEA+SSGSN  G
Sbjct: 396 LTALHASSEEVAEWINKDSPGGTEGSRQYSDGESRLLQSQEATSSGSNAHG 446


>ref|XP_002324089.1| predicted protein [Populus trichocarpa] gi|222867091|gb|EEF04222.1|
           predicted protein [Populus trichocarpa]
          Length = 1019

 Score = 67.0 bits (162), Expect(2) = 1e-19
 Identities = 32/42 (76%), Positives = 38/42 (90%)
 Frame = +3

Query: 3   LLKNTNTRENVLQYLAEVITKNKSRAHIQVDPISYVSSGMFV 128
           LLKN++TRE+VLQYLAEVI +N +RAHIQVDP+S  SSGMFV
Sbjct: 316 LLKNSDTRESVLQYLAEVINRNATRAHIQVDPLSCASSGMFV 357



 Score = 54.3 bits (129), Expect(2) = 1e-19
 Identities = 32/52 (61%), Positives = 38/52 (73%)
 Frame = +2

Query: 161 LTALHAWSEEVA*WIIKNNHGKGDVNGTNNDGENRLLQSQEASSSGSNTGGK 316
           LTALHA SEE+  W+  N   K DV+  ++D ENRLLQSQEASSSG N+G K
Sbjct: 397 LTALHASSEEITEWL--NTPRKTDVSALSSDEENRLLQSQEASSSG-NSGEK 445


>ref|NP_568313.2| putative ubiquitin conjugation factor E4 [Arabidopsis thaliana]
           gi|75174048|sp|Q9LF41.1|UBE4_ARATH RecName:
           Full=Probable ubiquitin conjugation factor E4; AltName:
           Full=Plant U-box protein 1; AltName: Full=U-box
           domain-containing protein 1; AltName:
           Full=Ubiquitin-fusion degradation protein 2-like;
           Short=UB fusion protein 2-like
           gi|9755795|emb|CAC01739.1| ubiquitin-fusion degradation
           protein-like [Arabidopsis thaliana]
           gi|332004773|gb|AED92156.1| putative ubiquitin
           conjugation factor E4 [Arabidopsis thaliana]
          Length = 1038

 Score = 65.1 bits (157), Expect(2) = 1e-18
 Identities = 32/42 (76%), Positives = 36/42 (85%)
 Frame = +3

Query: 3   LLKNTNTRENVLQYLAEVITKNKSRAHIQVDPISYVSSGMFV 128
           LLK+T+TRE VLQ+LAEVI  N SRAHIQVDP+S  SSGMFV
Sbjct: 327 LLKSTDTRERVLQFLAEVINANASRAHIQVDPVSCASSGMFV 368



 Score = 52.8 bits (125), Expect(2) = 1e-18
 Identities = 28/53 (52%), Positives = 35/53 (66%)
 Frame = +2

Query: 158 ELTALHAWSEEVA*WIIKNNHGKGDVNGTNNDGENRLLQSQEASSSGSNTGGK 316
           +LTALHA SEEV  WI K+     +  G  N  E+RLLQS+EA+SS SN  G+
Sbjct: 407 DLTALHASSEEVTEWIGKDAMANANDAGRENGNESRLLQSKEATSSSSNASGQ 459