BLASTX nr result

ID: Cnidium21_contig00001019 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00001019
         (679 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68722.1| hypothetical protein VITISV_033681 [Vitis vinifera]   274   1e-71
ref|XP_002268489.1| PREDICTED: probable ribosome biogenesis prot...   272   4e-71
ref|XP_002283418.1| PREDICTED: probable ribosome biogenesis prot...   272   5e-71
ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis prot...   271   9e-71
ref|NP_001236121.1| uncharacterized protein LOC100306000 [Glycin...   270   2e-70

>emb|CAN68722.1| hypothetical protein VITISV_033681 [Vitis vinifera]
          Length = 1073

 Score =  274 bits (701), Expect = 1e-71
 Identities = 139/174 (79%), Positives = 151/174 (86%), Gaps = 2/174 (1%)
 Frame = -3

Query: 659 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 480
           MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG
Sbjct: 57  MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 116

Query: 479 KDMTQDSTFEFERKRNRPERYDRNLAENTLKAIKKIEKVRVARAEAHHKNRMKGKKSVER 300
           KDMTQDSTFEFERKRNRPERYDRN+AENTLKAIKKI+KVRV R   HH  RMKGKK+ E+
Sbjct: 117 KDMTQDSTFEFERKRNRPERYDRNVAENTLKAIKKIDKVRVDREARHHALRMKGKKAKEQ 176

Query: 299 KQDAKELEQSIGMVRAPGAPRKDSSLVLPTTIKIKVS-HKSEENR-MEE*FVFY 144
           ++ AKELEQSI MV+AP   +++ SL LP  IK+KVS  +SEEN  MEE F  Y
Sbjct: 177 REAAKELEQSIHMVKAPAVLQQEPSLTLP-KIKVKVSQQQSEENHAMEECFSTY 229


>ref|XP_002268489.1| PREDICTED: probable ribosome biogenesis protein RLP24 [Vitis
           vinifera] gi|297734845|emb|CBI17079.3| unnamed protein
           product [Vitis vinifera]
          Length = 168

 Score =  272 bits (696), Expect = 4e-71
 Identities = 137/169 (81%), Positives = 149/169 (88%), Gaps = 2/169 (1%)
 Frame = -3

Query: 659 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 480
           MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60

Query: 479 KDMTQDSTFEFERKRNRPERYDRNLAENTLKAIKKIEKVRVARAEAHHKNRMKGKKSVER 300
           KDMTQDSTFEFERKRNRPERYDRN+AENTLKAIKKI+KVRV R   HH  RMKGKK+ E+
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNVAENTLKAIKKIDKVRVDREARHHALRMKGKKAKEQ 120

Query: 299 KQDAKELEQSIGMVRAPGAPRKDSSLVLPTTIKIKVS-HKSEENR-MEE 159
           ++ AKELEQSI MV+AP   +++ SL LP  IK+KVS  +SEEN  MEE
Sbjct: 121 REAAKELEQSIHMVKAPAVLQQEPSLTLP-KIKVKVSQQQSEENHAMEE 168


>ref|XP_002283418.1| PREDICTED: probable ribosome biogenesis protein RLP24 [Vitis
           vinifera] gi|297740070|emb|CBI30252.3| unnamed protein
           product [Vitis vinifera]
          Length = 168

 Score =  272 bits (695), Expect = 5e-71
 Identities = 137/169 (81%), Positives = 147/169 (86%), Gaps = 2/169 (1%)
 Frame = -3

Query: 659 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 480
           MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 60

Query: 479 KDMTQDSTFEFERKRNRPERYDRNLAENTLKAIKKIEKVRVARAEAHHKNRMKGKKSVER 300
           KDMTQDSTFEFERKRNRPERYDRNLAENTLKAIKKI+KVRV R   HH  RMKGKK+ E+
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENTLKAIKKIDKVRVDREARHHALRMKGKKAKEQ 120

Query: 299 KQDAKELEQSIGMVRAPGAPRKDSSLVLPTTIKIKVSH-KSEENR-MEE 159
           ++ AKELEQ I MV+AP    K+ SL LP  IK+KVS  ++EEN  MEE
Sbjct: 121 REAAKELEQGIHMVKAPAVLEKEPSLTLP-KIKVKVSRPQAEENHPMEE 168


>ref|XP_003551069.1| PREDICTED: probable ribosome biogenesis protein RLP24-like [Glycine
           max]
          Length = 168

 Score =  271 bits (693), Expect = 9e-71
 Identities = 135/169 (79%), Positives = 145/169 (85%), Gaps = 2/169 (1%)
 Frame = -3

Query: 659 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 480
           MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRR+HG
Sbjct: 1   MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60

Query: 479 KDMTQDSTFEFERKRNRPERYDRNLAENTLKAIKKIEKVRVARAEAHHKNRMKGKKSVER 300
           KDMTQDSTFEFERKRNRPERYDRNLAEN LKAI KI+K+RV R E HHKNRMKGKK    
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVTREERHHKNRMKGKKEKLL 120

Query: 299 KQDAKELEQSIGMVRAPGAPRKDSSLVLPTTIKIKVS-HKSEENR-MEE 159
           K+  KELEQ I +V+AP   ++D SL LP  IK+KVS  +SEEN  MEE
Sbjct: 121 KEAVKELEQGISLVKAPSVLQQDPSLTLP-KIKVKVSQQQSEENHAMEE 168


>ref|NP_001236121.1| uncharacterized protein LOC100306000 [Glycine max]
           gi|255627233|gb|ACU13961.1| unknown [Glycine max]
          Length = 168

 Score =  270 bits (689), Expect = 2e-70
 Identities = 133/169 (78%), Positives = 145/169 (85%), Gaps = 2/169 (1%)
 Frame = -3

Query: 659 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHG 480
           MRLEKCWFCSST+YPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRR+HG
Sbjct: 1   MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHG 60

Query: 479 KDMTQDSTFEFERKRNRPERYDRNLAENTLKAIKKIEKVRVARAEAHHKNRMKGKKSVER 300
           KDMTQDSTFEFERKRNRPERYDRNLAEN LK I KI+K+RV+R E HHKNRMKGKK    
Sbjct: 61  KDMTQDSTFEFERKRNRPERYDRNLAENVLKVIPKIDKIRVSREERHHKNRMKGKKEKLL 120

Query: 299 KQDAKELEQSIGMVRAPGAPRKDSSLVLPTTIKIKVS-HKSEENR-MEE 159
           K+  KELEQ I +V+AP   ++D SL LP  IK+KVS  +SEEN  MEE
Sbjct: 121 KEAVKELEQGISLVKAPSVLQQDPSLTLP-KIKVKVSQQQSEENHAMEE 168


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