BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000975
         (1259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA15421.1| HMR1 protein [Antirrhinum majus]                       86   2e-14
ref|XP_002321509.1| high mobility group family [Populus trichoca...    86   2e-14
ref|XP_003634203.1| PREDICTED: uncharacterized protein LOC100853...    84   8e-14
gb|AAA50196.1| DNA-binding protein [Nicotiana tabacum]                 82   2e-13
gb|AAA34051.1| DNA-binding protein, partial [Nicotiana tabacum]        82   2e-13

>emb|CAA15421.1| HMR1 protein [Antirrhinum majus]
          Length = 400

 Score = 86.3 bits (212), Expect = 2e-14
 Identities = 60/152 (39%), Positives = 77/152 (50%), Gaps = 19/152 (12%)
 Frame = -1

Query: 863 RPRGRPRK-------GTVLKPRGRPRKNVGGVGTAIIVPLEGMEDAGIPSKLAVRRK--- 714
           RPRGRP K       G V  P   P   V  V    +V     +  G P K     K   
Sbjct: 240 RPRGRPPKPINVVEGGAVAAPVAVPAGGVLPVAGGSVVAGVAPKRRGRPPKAGGEAKKPR 299

Query: 713 ---------PRKLSGKPLGRPKKGASALAIQPSNQQHSISYQDLKGRFEHFQTRVKHAVD 561
                    PRKLSGKPLGRPKK A+A   Q ++ Q  ++Y DLKG+ E+ Q+RVK A +
Sbjct: 300 LQTVVKPKTPRKLSGKPLGRPKKNAAAAVSQVADTQLLVAYLDLKGKLENLQSRVKLAAN 359

Query: 560 VVKPYLSNELAPVALGVLQEIEGLALMDVCAP 465
           V+KP L+ E    A+   QE+E LA ++  AP
Sbjct: 360 VIKPCLTTE---DAVNAFQELEMLATLNTTAP 388


>ref|XP_002321509.1| high mobility group family [Populus trichocarpa]
           gi|118481017|gb|ABK92462.1| unknown [Populus
           trichocarpa] gi|118487368|gb|ABK95512.1| unknown
           [Populus trichocarpa] gi|222868505|gb|EEF05636.1| high
           mobility group family [Populus trichocarpa]
          Length = 478

 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 55/138 (39%), Positives = 78/138 (56%), Gaps = 5/138 (3%)
 Frame = -1

Query: 863 RPRGRPRKGTVLKPRGRPRKNVGGVGTAIIVPLEGMEDAGIPSKLAV--RRKPRKLSGKP 690
           RPRGRPRKG  L           GVG  ++      +  G P KL V  + KP+K SG+P
Sbjct: 302 RPRGRPRKGAALA--------AAGVGAVVV----QAKRPGRPPKLPVIMKPKPKKSSGRP 349

Query: 689 LGRPKKGAS---ALAIQPSNQQHSISYQDLKGRFEHFQTRVKHAVDVVKPYLSNELAPVA 519
           +GRP+K A+   A+      Q  +  + DLK + E FQ+RVK A+ V+KP+L++     A
Sbjct: 350 VGRPRKNANAPWAITRASEPQAQAELHGDLKRKLEFFQSRVKQAIGVLKPHLTSATIS-A 408

Query: 518 LGVLQEIEGLALMDVCAP 465
           +  +QE+EGLA MD+  P
Sbjct: 409 VAAIQELEGLASMDINVP 426


>ref|XP_003634203.1| PREDICTED: uncharacterized protein LOC100853898 [Vitis vinifera]
           gi|147815426|emb|CAN74749.1| hypothetical protein
           VITISV_021497 [Vitis vinifera]
           gi|297734307|emb|CBI15554.3| unnamed protein product
           [Vitis vinifera]
          Length = 355

 Score = 84.0 bits (206), Expect = 8e-14
 Identities = 65/190 (34%), Positives = 92/190 (48%), Gaps = 13/190 (6%)
 Frame = -1

Query: 992 KRGRGRQVKKTGMVSXXXXXXXXXXXXXXXXXXXXXXGLVMGQRPRGRPRKGTVLK---- 825
           KRG GR  K  G+                        G++ G  PR RPR   V K    
Sbjct: 162 KRGPGRPPKSGGVRGPRPKSLDGPKRRPGRPPKAQLGGVIPGGVPRERPRTAGVTKVKVS 221

Query: 824 --PRGRPRK--NVG-GVGTAIIVPLEGMEDAGIPSKLAVRRKPRKLSGKPLGRPKKGASA 660
             PRGRP K   VG GVG  + V   G      P K    ++P+KL+G+P+GRP+K  + 
Sbjct: 222 GRPRGRPPKILTVGAGVGGGLSVKRRGR-----PPKADGPKRPKKLTGRPVGRPRKKLAT 276

Query: 659 LAIQPSNQQHSI----SYQDLKGRFEHFQTRVKHAVDVVKPYLSNELAPVALGVLQEIEG 492
             I P+  +  +    +Y+DLK + EH Q ++K +V V++   S E    A+  LQE+E 
Sbjct: 277 GEILPAASEQPVAEWMNYEDLKQKLEHIQGKIKLSVGVLRTQFS-ENNVSAMSALQELED 335

Query: 491 LALMDVCAPV 462
           LA MD+ AP+
Sbjct: 336 LATMDISAPL 345


>gb|AAA50196.1| DNA-binding protein [Nicotiana tabacum]
          Length = 546

 Score = 82.4 bits (202), Expect = 2e-13
 Identities = 46/114 (40%), Positives = 67/114 (58%)
 Frame = -1

Query: 827 KPRGRPRKNVGGVGTAIIVPLEGMEDAGIPSKLAVRRKPRKLSGKPLGRPKKGASALAIQ 648
           K RGRP K+ G    A  V                 ++PRKLSGKPLGRP+K  ++ A+ 
Sbjct: 442 KRRGRPPKSYGAAAAAPTV-----------------KRPRKLSGKPLGRPRKNVTSPAV- 483

Query: 647 PSNQQHSISYQDLKGRFEHFQTRVKHAVDVVKPYLSNELAPVALGVLQEIEGLA 486
            S+ +  ++Y++LKG+ EH Q+R+K A + +KP L+ E   +AL  LQE+E LA
Sbjct: 484 -SDPKLVVAYEELKGKLEHMQSRIKEAANALKPCLNAESPAIALAALQELEELA 536


>gb|AAA34051.1| DNA-binding protein, partial [Nicotiana tabacum]
          Length = 380

 Score = 82.4 bits (202), Expect = 2e-13
 Identities = 46/114 (40%), Positives = 67/114 (58%)
 Frame = -1

Query: 827 KPRGRPRKNVGGVGTAIIVPLEGMEDAGIPSKLAVRRKPRKLSGKPLGRPKKGASALAIQ 648
           K RGRP K+ G    A  V                 ++PRKLSGKPLGRP+K  ++ A+ 
Sbjct: 276 KRRGRPPKSYGAAAAAPTV-----------------KRPRKLSGKPLGRPRKNVTSPAV- 317

Query: 647 PSNQQHSISYQDLKGRFEHFQTRVKHAVDVVKPYLSNELAPVALGVLQEIEGLA 486
            S+ +  ++Y++LKG+ EH Q+R+K A + +KP L+ E   +AL  LQE+E LA
Sbjct: 318 -SDPKLVVAYEELKGKLEHMQSRIKEAANALKPCLNAESPAIALAALQELEELA 370