BLASTX nr result

ID: Cnidium21_contig00000972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000972
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626921.1| NBS-containing resistance-like protein [Medi...   104   8e-21
ref|XP_002310389.1| nls-tir-nbs-lrr resistance protein [Populus ...   103   2e-20
gb|ABF81471.1| TIR-NBS type disease resistance protein [Populus ...   103   2e-20
ref|XP_002325281.1| tir-nbs-lrr resistance protein [Populus tric...   102   2e-20
ref|XP_003548637.1| PREDICTED: TMV resistance protein N-like [Gl...   102   4e-20

>ref|XP_003626921.1| NBS-containing resistance-like protein [Medicago truncatula]
            gi|355520943|gb|AET01397.1| NBS-containing
            resistance-like protein [Medicago truncatula]
          Length = 2300

 Score =  104 bits (259), Expect = 8e-21
 Identities = 57/131 (43%), Positives = 84/131 (64%)
 Frame = -3

Query: 394  VGPFASGSVVIITTRDKEILDNIEVETKYQYMVNELSDTESETLLFKHAFGNTKPNNNLM 215
            VGP   GS++IITTRD  +L+ +EV+  + Y   EL+ +ES  L  KHAF    P  + +
Sbjct: 1487 VGP---GSIIIITTRDLRVLNILEVD--FIYEAEELNASESLELFCKHAFRKAIPTQDFL 1541

Query: 214  ILSKDILRLAGGLPLALEVFGSYLYKKSEVRWKSYIETLQRNPNSTIRQRLLISLNALES 35
            ILS+D++   GG+PLALEV GSYL+K+ +  W+S +  L++ PN  I + L IS + L+ 
Sbjct: 1542 ILSRDVVAYCGGIPLALEVLGSYLFKRKKQEWRSVLSKLEKIPNDQIHEILKISFDGLK- 1600

Query: 34   DDPLLKKMFLD 2
             D + K +FLD
Sbjct: 1601 -DRMEKNIFLD 1610


>ref|XP_002310389.1| nls-tir-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222853292|gb|EEE90839.1| nls-tir-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 560

 Score =  103 bits (256), Expect = 2e-20
 Identities = 58/125 (46%), Positives = 81/125 (64%)
 Frame = -3

Query: 376 GSVVIITTRDKEILDNIEVETKYQYMVNELSDTESETLLFKHAFGNTKPNNNLMILSKDI 197
           GS VIITTRD+ +L    +E   +Y V EL+   S  L  +HAF +TKP  + + LS D+
Sbjct: 322 GSRVIITTRDESLL----LEADQRYQVQELNRDNSLQLFCRHAFRDTKPAKDYVELSNDV 377

Query: 196 LRLAGGLPLALEVFGSYLYKKSEVRWKSYIETLQRNPNSTIRQRLLISLNALESDDPLLK 17
           +   GGLPLAL+V GS LY K++ RW+S I+ L++ PNS I+++L IS + L  D+  LK
Sbjct: 378 VEYCGGLPLALKVLGSCLYGKNQARWESVIDRLRKFPNSEIQKKLRISFDTL--DESTLK 435

Query: 16  KMFLD 2
             FLD
Sbjct: 436 NTFLD 440


>gb|ABF81471.1| TIR-NBS type disease resistance protein [Populus trichocarpa]
          Length = 1368

 Score =  103 bits (256), Expect = 2e-20
 Identities = 58/125 (46%), Positives = 81/125 (64%)
 Frame = -3

Query: 376 GSVVIITTRDKEILDNIEVETKYQYMVNELSDTESETLLFKHAFGNTKPNNNLMILSKDI 197
           GS VIITTRD+ +L    +E   +Y V EL+   S  L  +HAF +TKP  + + LS D+
Sbjct: 428 GSRVIITTRDESLL----LEADQRYQVQELNRDNSLQLFCRHAFRDTKPAKDYVELSNDV 483

Query: 196 LRLAGGLPLALEVFGSYLYKKSEVRWKSYIETLQRNPNSTIRQRLLISLNALESDDPLLK 17
           +   GGLPLAL+V GS LY K++ RW+S I+ L++ PNS I+++L IS + L  D+  LK
Sbjct: 484 VEYCGGLPLALKVLGSCLYGKNQARWESVIDRLRKFPNSEIQKKLRISFDTL--DESTLK 541

Query: 16  KMFLD 2
             FLD
Sbjct: 542 NTFLD 546


>ref|XP_002325281.1| tir-nbs-lrr resistance protein [Populus trichocarpa]
           gi|224145731|ref|XP_002325746.1| tir-nbs-lrr resistance
           protein [Populus trichocarpa]
           gi|222862156|gb|EEE99662.1| tir-nbs-lrr resistance
           protein [Populus trichocarpa]
           gi|222862621|gb|EEF00128.1| tir-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 526

 Score =  102 bits (255), Expect = 2e-20
 Identities = 60/128 (46%), Positives = 81/128 (63%)
 Frame = -3

Query: 385 FASGSVVIITTRDKEILDNIEVETKYQYMVNELSDTESETLLFKHAFGNTKPNNNLMILS 206
           F  GS ++ITTRD+ +L  IEV+ KY   V EL   ES  L   HAF +T P  + + LS
Sbjct: 312 FGPGSRIVITTRDEHLLTQIEVDGKYH--VKELHQHESLQLFSLHAFKDTHPEEDYVELS 369

Query: 205 KDILRLAGGLPLALEVFGSYLYKKSEVRWKSYIETLQRNPNSTIRQRLLISLNALESDDP 26
             I+  AGG+PLALEV GSYL++++   WKS I+ L++ PN  I++ L IS + L  DD 
Sbjct: 370 NAIVDYAGGVPLALEVLGSYLFRRNISVWKSAIKKLRKIPNRQIQKTLRISFDTL--DDD 427

Query: 25  LLKKMFLD 2
            +K MFLD
Sbjct: 428 KVKAMFLD 435


>ref|XP_003548637.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1048

 Score =  102 bits (253), Expect = 4e-20
 Identities = 53/128 (41%), Positives = 82/128 (64%)
 Frame = -3

Query: 385 FASGSVVIITTRDKEILDNIEVETKYQYMVNELSDTESETLLFKHAFGNTKPNNNLMILS 206
           F  GSV+IITTRD+ +LD ++V+  Y Y V+++ + ES  L   HAF   KP  +   L+
Sbjct: 321 FGQGSVIIITTRDRRLLDQLKVD--YVYDVDKMDENESLELFSWHAFNEAKPKEDFNELA 378

Query: 205 KDILRLAGGLPLALEVFGSYLYKKSEVRWKSYIETLQRNPNSTIRQRLLISLNALESDDP 26
           ++++   GGLPLALEV GSYL ++ +  W+S +  L+R PN  ++++L IS + L   D 
Sbjct: 379 RNVVAYCGGLPLALEVLGSYLNERRKKDWESVLSKLERIPNDQVQEKLRISFDGL--SDH 436

Query: 25  LLKKMFLD 2
           + K +FLD
Sbjct: 437 MEKDIFLD 444


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