BLASTX nr result
ID: Cnidium21_contig00000895
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00000895
(1501 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285452.1| PREDICTED: U-box domain-containing protein 7... 290 4e-90
ref|XP_003558846.1| PREDICTED: U-box domain-containing protein 7... 288 3e-87
ref|XP_003574025.1| PREDICTED: U-box domain-containing protein 7... 286 8e-86
ref|NP_001150622.1| pre-mRNA-splicing factor 19 [Zea mays] gi|19... 288 1e-85
ref|NP_001064804.1| Os10g0466300 [Oryza sativa Japonica Group] g... 283 4e-85
>ref|XP_002285452.1| PREDICTED: U-box domain-containing protein 72 [Vitis vinifera]
gi|296083725|emb|CBI23714.3| unnamed protein product
[Vitis vinifera]
Length = 524
Score = 290 bits (742), Expect(2) = 4e-90
Identities = 155/284 (54%), Positives = 193/284 (67%), Gaps = 4/284 (1%)
Frame = +2
Query: 437 DIIATGGADANVVVSDQLYGNVISTLEGHSKKVTSLKFVKNGELVVTGSADSTVRVWQWS 616
DIIATGG DAN V+ D+ G ++STL GHSKKVTS+KFV +L +T SAD TVRVWQ S
Sbjct: 237 DIIATGGVDANAVLFDRQSGQILSTLSGHSKKVTSVKFVTQDDLFLTASADKTVRVWQGS 296
Query: 617 GDGSYKCKHTLDHHTAEVQAVTIHPDQKYFVSASLDGTWKLYDLSCDSRIIQVGHVWGRE 796
+ +Y C+H L HTAEVQAVT+H YFV+ASLD TW YDLS + QV G E
Sbjct: 297 DNENYNCRHILKDHTAEVQAVTVHATNNYFVTASLDNTWCFYDLSSGLCLTQVADASGSE 356
Query: 797 RFMTAAFHPDGHIIGTGTS-GFVRFWDVAEQDDILKLNAHDGLVTSMAFSENGRYLATAA 973
+ +AAFHPDG I+GTGTS V+ WDV Q ++ + + H G VT+++FSENG +LATAA
Sbjct: 357 GYTSAAFHPDGLILGTGTSEALVKIWDVKSQANVARFDGHVGAVTAISFSENGYFLATAA 416
Query: 974 EDGVKLWDLRFLRKLMSF-PSDGCINMGPVDFDHSGLYLASGGSHISAYNVASA-SECDM 1147
DGVKLWDLR LR +F P D V+FDHSG YLA GS I Y VA+ SE +
Sbjct: 417 HDGVKLWDLRKLRNFRTFTPYDSNTATNSVEFDHSGNYLAIAGSDIRVYQVANVKSEWNC 476
Query: 1148 ITSFP-ISGIGKTSCLKFGKDAKYVAAGLVDSSKLLLFTSPKED 1276
I +FP +SG GK +C+KFG DAKY+A G +D + L +F P +D
Sbjct: 477 IKTFPDLSGTGKATCVKFGPDAKYLAVGSMDRN-LRIFGLPGDD 519
Score = 69.7 bits (169), Expect(2) = 4e-90
Identities = 51/111 (45%), Positives = 62/111 (55%), Gaps = 13/111 (11%)
Frame = +1
Query: 70 KIPDSVSTAVTLNDSSSSNSKTVEEFECQKMLKHVGKEIRHSF------------VRLRQ 213
+IP S+STA +N S+ SN K E E L GK++R L Q
Sbjct: 135 QIPMSMSTATAVNASALSNGKRAAEDE---ELGPNGKKLRPGISASIITELTDCNAALSQ 191
Query: 214 HRRHLRKIPTSLTSIDALQRYT-LCERSLHKTNMPGILSLDVDNSKDIIAT 363
R+ R+IPTSL IDA++RYT L LHKTN PGILS D+ SKDIIAT
Sbjct: 192 QRKK-RQIPTSLAPIDAVERYTQLSSYPLHKTNKPGILSADIYYSKDIIAT 241
>ref|XP_003558846.1| PREDICTED: U-box domain-containing protein 72-like [Brachypodium
distachyon]
Length = 527
Score = 288 bits (737), Expect(2) = 3e-87
Identities = 154/286 (53%), Positives = 191/286 (66%), Gaps = 4/286 (1%)
Frame = +2
Query: 437 DIIATGGADANVVVSDQLYGNVISTLEGHSKKVTSLKFVKNGELVVTGSADSTVRVWQWS 616
DIIATGG D N V+ D+ G V+ TL GHSKK+TSLKFV EL++TGSAD TVR+WQ S
Sbjct: 234 DIIATGGIDTNAVLFDRPSGQVLCTLTGHSKKITSLKFVPWDELLITGSADKTVRIWQGS 293
Query: 617 GDGSYKCKHTLDHHTAEVQAVTIHPDQKYFVSASLDGTWKLYDLSCDSRIIQVGHVWGRE 796
DG+Y C+HTL H AEVQAVT+H QKYFV+AS D TW YD+S S + QVG G++
Sbjct: 294 EDGNYGCRHTLKDHNAEVQAVTVHATQKYFVTASRDNTWCFYDISTGSCLTQVGEASGQD 353
Query: 797 RFMTAAFHPDGHIIGTGTS-GFVRFWDVAEQDDILKLNAHDGLVTSMAFSENGRYLATAA 973
+ AAFHPDG I+GTGTS V+ WDV Q ++ K + H G VT+M+FSENG +LATAA
Sbjct: 354 GYTAAAFHPDGLILGTGTSEAVVKIWDVKTQSNVAKFDGHVGAVTAMSFSENGYFLATAA 413
Query: 974 EDGVKLWDLRFLRKLMSF-PSDGCINMGPVDFDHSGLYLASGGSHISAYNVASAS-ECDM 1147
DGVKLWDLR LR + P D V+FD SG YLA GS I Y VA+ E ++
Sbjct: 414 VDGVKLWDLRKLRNFRTISPYDPDTPTSSVEFDSSGSYLAVAGSDIRVYQVANVKMEWNL 473
Query: 1148 ITSFP-ISGIGKTSCLKFGKDAKYVAAGLVDSSKLLLFTSPKEDME 1282
+ + P +SG GK + +KFG DAKYVA G +D + + E ME
Sbjct: 474 VKTLPDLSGTGKVTSVKFGTDAKYVAVGSMDRNLRIFGLPGDEQME 519
Score = 62.0 bits (149), Expect(2) = 3e-87
Identities = 31/50 (62%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
Frame = +1
Query: 217 RRHLRKIPTSLTSIDALQRYT-LCERSLHKTNMPGILSLDVDNSKDIIAT 363
+R R++P SL SIDAL+RYT + LHKTN PGILS+D+ +SKDIIAT
Sbjct: 189 QRKKRQVPPSLASIDALERYTQVSSHPLHKTNKPGILSIDIHHSKDIIAT 238
>ref|XP_003574025.1| PREDICTED: U-box domain-containing protein 72-like [Brachypodium
distachyon]
Length = 527
Score = 286 bits (731), Expect(2) = 8e-86
Identities = 152/284 (53%), Positives = 193/284 (67%), Gaps = 4/284 (1%)
Frame = +2
Query: 437 DIIATGGADANVVVSDQLYGNVISTLEGHSKKVTSLKFVKNGELVVTGSADSTVRVWQWS 616
DIIATGG D N V+ D+ G ++STL GHSKK+T+LKFV ELVVTGSAD TVR+WQ S
Sbjct: 234 DIIATGGIDTNAVLFDRPSGQILSTLSGHSKKITTLKFVPRDELVVTGSADKTVRIWQGS 293
Query: 617 GDGSYKCKHTLDHHTAEVQAVTIHPDQKYFVSASLDGTWKLYDLSCDSRIIQVGHVWGRE 796
+G+Y C HTL HTAE++AVT+H QKYFV+A+ D TW YD+S + QVG G E
Sbjct: 294 EEGNYNCIHTLKDHTAEIEAVTVHATQKYFVTAARDNTWCFYDISTGYCLSQVGEASGLE 353
Query: 797 RFMTAAFHPDGHIIGTGTS-GFVRFWDVAEQDDILKLNAHDGLVTSMAFSENGRYLATAA 973
+ +A+FHPDG I+GTGT+ V+ WDV Q ++ K H G VT+M+FSENG +LATAA
Sbjct: 354 GYTSASFHPDGLILGTGTTDAAVKIWDVKTQSNVAKFEGHAGPVTAMSFSENGYFLATAA 413
Query: 974 EDGVKLWDLRFLRKLMSF-PSDGCINMGPVDFDHSGLYLASGGSHISAYNVASA-SECDM 1147
DGVKLWDLR LR +F P D V+FD SG YLA GS I Y VA+ +E ++
Sbjct: 414 LDGVKLWDLRKLRNFRTFSPYDSDTPTNSVEFDFSGSYLAVAGSDIRVYQVANVKTEWNL 473
Query: 1148 ITSFP-ISGIGKTSCLKFGKDAKYVAAGLVDSSKLLLFTSPKED 1276
I + P +SG GK + KFG D+KY+A G +D + L +F P ED
Sbjct: 474 IKTLPDLSGTGKVTSAKFGADSKYIAVGSMDRN-LRIFGLPGED 516
Score = 59.7 bits (143), Expect(2) = 8e-86
Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = +1
Query: 217 RRHLRKIPTSLTSIDALQRYT-LCERSLHKTNMPGILSLDVDNSKDIIAT 363
+R R++P SL IDAL+RYT + LHKTN PGILS+D+ SKDIIAT
Sbjct: 189 QRKKRQVPPSLAQIDALERYTQISSHPLHKTNKPGILSMDIHPSKDIIAT 238
>ref|NP_001150622.1| pre-mRNA-splicing factor 19 [Zea mays] gi|195640644|gb|ACG39790.1|
pre-mRNA-splicing factor 19 [Zea mays]
gi|224030373|gb|ACN34262.1| unknown [Zea mays]
gi|414871140|tpg|DAA49697.1| TPA: pre-mRNA-splicing
factor 19 isoform 1 [Zea mays]
gi|414871141|tpg|DAA49698.1| TPA: pre-mRNA-splicing
factor 19 isoform 2 [Zea mays]
Length = 526
Score = 288 bits (737), Expect(2) = 1e-85
Identities = 150/284 (52%), Positives = 195/284 (68%), Gaps = 4/284 (1%)
Frame = +2
Query: 437 DIIATGGADANVVVSDQLYGNVISTLEGHSKKVTSLKFVKNGELVVTGSADSTVRVWQWS 616
D++ATGG D N V+ D+ G ++ TL GHSKK+T+LKFV +L VTGSAD TVR+WQ +
Sbjct: 234 DVVATGGIDTNAVIFDRSSGQILCTLTGHSKKITTLKFVPRDQLFVTGSADKTVRIWQEN 293
Query: 617 GDGSYKCKHTLDHHTAEVQAVTIHPDQKYFVSASLDGTWKLYDLSCDSRIIQVGHVWGRE 796
+G+Y C HTL HTAEV+AVT+H QKYFVSAS D +W YD+S S + QVG G+E
Sbjct: 294 ENGNYNCVHTLKDHTAEVEAVTVHATQKYFVSASKDNSWCFYDISTGSCLTQVGEASGQE 353
Query: 797 RFMTAAFHPDGHIIGTGTS-GFVRFWDVAEQDDILKLNAHDGLVTSMAFSENGRYLATAA 973
+ +A+FHPDG I+GTGT+ V+ WDV Q ++ K H G VT+M+FSENG +LATAA
Sbjct: 354 GYTSASFHPDGLILGTGTTDAVVKIWDVKTQSNVAKFEGHVGPVTAMSFSENGYFLATAA 413
Query: 974 EDGVKLWDLRFLRKLMSF-PSDGCINMGPVDFDHSGLYLASGGSHISAYNVASA-SECDM 1147
DGVKLWDLR LR +F P D V+FD SG YLA GGS I Y VA+ +E ++
Sbjct: 414 HDGVKLWDLRKLRNFRTFSPYDSDTPTNTVEFDFSGNYLAIGGSDIRVYQVANVKAEWNL 473
Query: 1148 ITSFP-ISGIGKTSCLKFGKDAKYVAAGLVDSSKLLLFTSPKED 1276
I + P +SG GK + +KFG DAKY+A G +D + L +F P +D
Sbjct: 474 IKTLPDLSGTGKVTSVKFGADAKYIAVGSMDRN-LRIFGLPGDD 516
Score = 57.0 bits (136), Expect(2) = 1e-85
Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Frame = +1
Query: 217 RRHLRKIPTSLTSIDALQRYT-LCERSLHKTNMPGILSLDVDNSKDIIAT 363
+R R++P +L +DAL+RYT + LHKTN PGILS+DV SKD++AT
Sbjct: 189 QRKKRQVPPTLAPLDALERYTQISSHPLHKTNKPGILSMDVHPSKDVVAT 238
>ref|NP_001064804.1| Os10g0466300 [Oryza sativa Japonica Group]
gi|75333134|sp|Q9AV81.1|PUB72_ORYSJ RecName: Full=U-box
domain-containing protein 72; AltName: Full=Plant U-box
protein 72; Short=OsPUB72
gi|13489182|gb|AAK27816.1|AC022457_19 putative WD-repeat
containing protein [Oryza sativa Japonica Group]
gi|31432577|gb|AAP54192.1| PRP19/PSO4, putative,
expressed [Oryza sativa Japonica Group]
gi|110289220|gb|ABG66129.1| PRP19/PSO4, putative,
expressed [Oryza sativa Japonica Group]
gi|113639413|dbj|BAF26718.1| Os10g0466300 [Oryza sativa
Japonica Group] gi|215694001|dbj|BAG89200.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222612972|gb|EEE51104.1| hypothetical protein
OsJ_31829 [Oryza sativa Japonica Group]
Length = 527
Score = 283 bits (724), Expect(2) = 4e-85
Identities = 151/284 (53%), Positives = 191/284 (67%), Gaps = 4/284 (1%)
Frame = +2
Query: 437 DIIATGGADANVVVSDQLYGNVISTLEGHSKKVTSLKFVKNGELVVTGSADSTVRVWQWS 616
DIIATGG D N V+ D+ G ++ TL GHSKK+TSLKFV EL VTGSAD TV++WQ S
Sbjct: 234 DIIATGGIDTNAVLFDRPSGQILCTLTGHSKKITSLKFVPRDELFVTGSADKTVKIWQGS 293
Query: 617 GDGSYKCKHTLDHHTAEVQAVTIHPDQKYFVSASLDGTWKLYDLSCDSRIIQVGHVWGRE 796
+G+Y C HTL HTAEV+AVT+H QKYFV+AS D TW YD+ S + QVG G+E
Sbjct: 294 EEGNYNCIHTLKDHTAEVEAVTVHATQKYFVTASKDNTWCFYDIPSGSCLTQVGESSGQE 353
Query: 797 RFMTAAFHPDGHIIGTGTS-GFVRFWDVAEQDDILKLNAHDGLVTSMAFSENGRYLATAA 973
+ +A+FHPDG I+GTGT+ V+ WDV Q ++ K H G VT+M+FSENG +LATAA
Sbjct: 354 GYTSASFHPDGLILGTGTTEAVVKIWDVKTQSNVAKFEGHVGPVTAMSFSENGYFLATAA 413
Query: 974 EDGVKLWDLRFLRKLMSF-PSDGCINMGPVDFDHSGLYLASGGSHISAYNVASAS-ECDM 1147
DGVKLWDLR LR + P D V+FD SG YLA GGS Y VA+ E ++
Sbjct: 414 LDGVKLWDLRKLRNFRTISPYDSDTPTNSVEFDFSGSYLAVGGSDTRVYQVANVKLEWNL 473
Query: 1148 ITSFP-ISGIGKTSCLKFGKDAKYVAAGLVDSSKLLLFTSPKED 1276
+ + P +SG GK + +KFG DAKY+A G +D + L +F P ED
Sbjct: 474 VKTLPDLSGTGKVTNVKFGTDAKYIAVGSMDRN-LRIFGHPGED 516
Score = 60.1 bits (144), Expect(2) = 4e-85
Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Frame = +1
Query: 181 EIRHSFVRLRQHRRHLRKIPTSLTSIDALQRYT-LCERSLHKTNMPGILSLDVDNSKDII 357
E+ L HR+ R++P +L SIDA++RYT + LHKTN PGILS+D+ SKDII
Sbjct: 178 ELTECNTMLSAHRKK-RQVPPTLASIDAIERYTQISSHPLHKTNKPGILSMDIHPSKDII 236
Query: 358 AT 363
AT
Sbjct: 237 AT 238