BLASTX nr result

ID: Cnidium21_contig00000894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000894
         (1179 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635266.1| PREDICTED: cyclin-C1-2-like isoform 2 [Vitis...   358   2e-96
ref|XP_004147331.1| PREDICTED: cyclin-C1-1-like [Cucumis sativus]     350   3e-94
ref|XP_003552106.1| PREDICTED: cyclin-C1-2-like isoform 1 [Glyci...   349   9e-94
ref|XP_002301804.1| predicted protein [Populus trichocarpa] gi|2...   333   4e-89
ref|XP_003622864.1| Cyclin-C1-2 [Medicago truncatula] gi|3554978...   330   3e-88

>ref|XP_003635266.1| PREDICTED: cyclin-C1-2-like isoform 2 [Vitis vinifera]
            gi|359496562|ref|XP_002271774.2| PREDICTED:
            cyclin-C1-2-like isoform 1 [Vitis vinifera]
            gi|296090637|emb|CBI41021.3| unnamed protein product
            [Vitis vinifera]
          Length = 251

 Score =  358 bits (918), Expect = 2e-96
 Identities = 180/250 (72%), Positives = 202/250 (80%)
 Frame = -2

Query: 1022 MAANFWTSTQQKQLLDPEEVDVVHQVDRETGFTLEDCKLIKMHMANYIARLAQNVKVRQR 843
            MAANFWTS+  KQLLD EEVDVVH +D+E G TLED KLIKMHMANYI RL QNVKVRQR
Sbjct: 1    MAANFWTSSHYKQLLDQEEVDVVHPLDKEKGVTLEDFKLIKMHMANYIGRLGQNVKVRQR 60

Query: 842  VVATAVTYMRRVYTRKSMTEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKLHSDEKY 663
            VVATA+TYMRRVYTRK+MTEYDPRLVAPT LYLA+KAEESTVQARLLVFY++KL+ DEKY
Sbjct: 61   VVATAITYMRRVYTRKAMTEYDPRLVAPTSLYLAAKAEESTVQARLLVFYVRKLNPDEKY 120

Query: 662  RFXXXXXXXXXXXXXEALNYYLVVYHPYRALSQLLQDAGMSDATQLAWGLVNDTYKMDXX 483
            R+             EALNYYLVV+HPYRALSQLLQDA ++D TQL+WG+VNDTYKMD  
Sbjct: 121  RYEIKDILEMEMKILEALNYYLVVFHPYRALSQLLQDANLNDLTQLSWGIVNDTYKMDLI 180

Query: 482  XXXXXXXXXXACIYVASVLKDKENTTWFEELRVDMNVVKNIAMEILDFYDSHKMITEERV 303
                      ACIY+ASV KDKE T WFEELRVDMNVVKNI+MEILDFYDSH+ ITE+R+
Sbjct: 181  LIYPPHLIALACIYIASVHKDKETTAWFEELRVDMNVVKNISMEILDFYDSHRTITEDRI 240

Query: 302  HLAMHKLGFK 273
                +KL  +
Sbjct: 241  TTTFNKLALR 250


>ref|XP_004147331.1| PREDICTED: cyclin-C1-1-like [Cucumis sativus]
          Length = 253

 Score =  350 bits (899), Expect = 3e-94
 Identities = 179/252 (71%), Positives = 203/252 (80%), Gaps = 2/252 (0%)
 Frame = -2

Query: 1022 MAANFWTSTQQKQLLDPEEVDVVHQVDRETGFTLEDCKLIKMHMANYIARLAQNVKVRQR 843
            MAANFWTS+  KQLLD EEVDVV  +D++ G TLED KLIKMHMANYI +LAQNVKVRQR
Sbjct: 1    MAANFWTSSHYKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMHMANYILKLAQNVKVRQR 60

Query: 842  VVATAVTYMRRVYTRKSMTEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKLHSDEKY 663
            VVATA+TYMRRVYTRKSMTEYDPRLV PTCLYLASKAEESTVQARLLVFYIKK+ SDEKY
Sbjct: 61   VVATAITYMRRVYTRKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIQSDEKY 120

Query: 662  RFXXXXXXXXXXXXXEALNYYLVVYHPYRALSQLLQDAGMSD--ATQLAWGLVNDTYKMD 489
            ++             EAL+YYLVV+HPYRALSQLLQDAG++D   TQL WGLVNDTYKMD
Sbjct: 121  KYEIKHILEMEMKILEALDYYLVVFHPYRALSQLLQDAGLNDINMTQLTWGLVNDTYKMD 180

Query: 488  XXXXXXXXXXXXACIYVASVLKDKENTTWFEELRVDMNVVKNIAMEILDFYDSHKMITEE 309
                        ACIY+ASVL++K+ T WFEEL VDMNVVKNI++EILDFY++H+ ITEE
Sbjct: 181  LILIHPPYLIALACIYIASVLREKDTTAWFEELHVDMNVVKNISIEILDFYENHRTITEE 240

Query: 308  RVHLAMHKLGFK 273
            R+  A+ KL  K
Sbjct: 241  RIISALGKLPMK 252


>ref|XP_003552106.1| PREDICTED: cyclin-C1-2-like isoform 1 [Glycine max]
          Length = 253

 Score =  349 bits (895), Expect = 9e-94
 Identities = 176/252 (69%), Positives = 204/252 (80%), Gaps = 2/252 (0%)
 Frame = -2

Query: 1022 MAANFWTSTQQKQLLDPEEVDVVHQVDRETGFTLEDCKLIKMHMANYIARLAQNVKVRQR 843
            MAANFWTS+  K LLD E+VD+V+ +D+E G TLED KLIKMHMANYI +LAQ VKVRQR
Sbjct: 1    MAANFWTSSHYKHLLDQEDVDMVNPLDKEKGITLEDFKLIKMHMANYILKLAQQVKVRQR 60

Query: 842  VVATAVTYMRRVYTRKSMTEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKLHSDEKY 663
            VVATA+TYMRRVYTRKSMTEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKL++D+KY
Sbjct: 61   VVATAITYMRRVYTRKSMTEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKLYTDDKY 120

Query: 662  RFXXXXXXXXXXXXXEALNYYLVVYHPYRALSQLLQDAGMSD--ATQLAWGLVNDTYKMD 489
            R+             EALNYYLVVYHPYR+LS LLQDAG++D   TQL WG VNDTYKMD
Sbjct: 121  RYEIKDILEMEMKILEALNYYLVVYHPYRSLSPLLQDAGLNDLNMTQLTWGFVNDTYKMD 180

Query: 488  XXXXXXXXXXXXACIYVASVLKDKENTTWFEELRVDMNVVKNIAMEILDFYDSHKMITEE 309
                        ACIY+ASVL++K+ T WFEELRVDMNVVKNI+MEILDFY+S++M T+E
Sbjct: 181  LILVHPPHLIALACIYIASVLREKDTTAWFEELRVDMNVVKNISMEILDFYESNRMFTDE 240

Query: 308  RVHLAMHKLGFK 273
            R++ A+ KL  +
Sbjct: 241  RINSALQKLSLR 252


>ref|XP_002301804.1| predicted protein [Populus trichocarpa] gi|222843530|gb|EEE81077.1|
            predicted protein [Populus trichocarpa]
          Length = 251

 Score =  333 bits (855), Expect = 4e-89
 Identities = 171/249 (68%), Positives = 196/249 (78%), Gaps = 2/249 (0%)
 Frame = -2

Query: 1022 MAANFWTSTQQKQLLDPEEVDVVHQVDRETGFTLEDCKLIKMHMANYIARLAQNVKVRQR 843
            MAANFW S+  KQL D EEVDVVH +D+E G TLED KLIKMHM   I +LAQ+VKVRQR
Sbjct: 1    MAANFWNSSHYKQLFDQEEVDVVHPLDKEKGITLEDFKLIKMHMVIPICKLAQSVKVRQR 60

Query: 842  VVATAVTYMRRVYTRKSMTEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKLHSDEKY 663
            VVATAVTYMRR+YTRKSM+EYDPRLV PTCLYLASKAEESTVQARLLV+YIKK++SD+K+
Sbjct: 61   VVATAVTYMRRLYTRKSMSEYDPRLVGPTCLYLASKAEESTVQARLLVYYIKKIYSDDKH 120

Query: 662  RFXXXXXXXXXXXXXEALNYYLVVYHPYRALSQLLQDAGMSD--ATQLAWGLVNDTYKMD 489
            R+             EALNYYLVV+HPYR+L Q L DAGM+D   TQL WGLVNDTYKMD
Sbjct: 121  RYEIKDILEMEMKILEALNYYLVVFHPYRSLPQFLLDAGMNDISMTQLTWGLVNDTYKMD 180

Query: 488  XXXXXXXXXXXXACIYVASVLKDKENTTWFEELRVDMNVVKNIAMEILDFYDSHKMITEE 309
                        ACIY ASV ++K+ T WFEELRVDMNVVKNIAMEILDFY+SH++IT++
Sbjct: 181  LILIHPPHLIALACIYTASVYREKDKTAWFEELRVDMNVVKNIAMEILDFYESHRLITDD 240

Query: 308  RVHLAMHKL 282
            RV  A +KL
Sbjct: 241  RVAAAFNKL 249


>ref|XP_003622864.1| Cyclin-C1-2 [Medicago truncatula] gi|355497879|gb|AES79082.1|
            Cyclin-C1-2 [Medicago truncatula]
          Length = 249

 Score =  330 bits (847), Expect = 3e-88
 Identities = 168/249 (67%), Positives = 197/249 (79%), Gaps = 2/249 (0%)
 Frame = -2

Query: 1022 MAANFWTSTQQKQLLDPEEVDVVHQVDRETGFTLEDCKLIKMHMANYIARLAQNVKVRQR 843
            MAANFWTS+    LL  E+VD V+ VD+E G TLED KLIKMHM+NYI +LAQ VKVRQR
Sbjct: 1    MAANFWTSSHYTHLLVQEDVDKVNPVDKEKGVTLEDFKLIKMHMSNYILKLAQQVKVRQR 60

Query: 842  VVATAVTYMRRVYTRKSMTEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKLHSDEKY 663
            VVATAVTYMRRVYTR SMTEYDPRLVAP CLYLASKAEESTVQARLLVFYIKKL++D+KY
Sbjct: 61   VVATAVTYMRRVYTRMSMTEYDPRLVAPACLYLASKAEESTVQARLLVFYIKKLYADDKY 120

Query: 662  RFXXXXXXXXXXXXXEALNYYLVVYHPYRALSQLLQDAGMSD--ATQLAWGLVNDTYKMD 489
            R+             EAL YYLVV+HPYR+LS  LQDAG++D   TQL WGLVNDTYKMD
Sbjct: 121  RYEIKDILEMEMKILEALKYYLVVFHPYRSLSGFLQDAGLNDLSMTQLTWGLVNDTYKMD 180

Query: 488  XXXXXXXXXXXXACIYVASVLKDKENTTWFEELRVDMNVVKNIAMEILDFYDSHKMITEE 309
                        ACIY+ASVL++K+ T W+EELRVDMNV+KNI+MEILDFY++++M T+E
Sbjct: 181  LMLVHPPHLIALACIYIASVLREKDTTVWYEELRVDMNVIKNISMEILDFYENNRMFTDE 240

Query: 308  RVHLAMHKL 282
            R++ A+ KL
Sbjct: 241  RINTALQKL 249


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