BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000875
         (1174 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513193.1| ribonucleoprotein, chloroplast, putative [Ri...   312   1e-82
gb|ABK96373.1| unknown [Populus trichocarpa x Populus deltoides]      305   1e-80
ref|XP_002314019.1| predicted protein [Populus trichocarpa] gi|2...   304   3e-80
ref|XP_003531427.1| PREDICTED: 30S ribosomal protein 2, chloropl...   295   1e-77
ref|XP_004135910.1| PREDICTED: 30S ribosomal protein 2, chloropl...   293   6e-77

>ref|XP_002513193.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
           gi|223547691|gb|EEF49184.1| ribonucleoprotein,
           chloroplast, putative [Ricinus communis]
          Length = 256

 Score =  312 bits (799), Expect = 1e-82
 Identities = 174/263 (66%), Positives = 196/263 (74%), Gaps = 12/263 (4%)
 Frame = +3

Query: 117 MATFSSIWS--------PNFLQIPKPLTTKQPLQPSKVCVNIFHSHPSHISHKSAVSSPL 272
           MAT SS+ S          F  +PKP  T   L+P+   +N      S  SH   V +P 
Sbjct: 1   MATISSLASILPTSTKFTLFTNLPKP--TFLILKPTTHFINF-----SKFSHLDVVLNPR 53

Query: 273 NTKRLYVVAEETAVVTK----SSDAERRLYVGNIPRNLKNDELQKIVEEHGAVEKVEVMY 440
             +RL+ VAEE A V      SS+A +RLY+GNIPR + NDEL KIVEEHGAVEK EVMY
Sbjct: 54  VPRRLFAVAEEAAPVAPPPDPSSEAAKRLYIGNIPRTVDNDELTKIVEEHGAVEKAEVMY 113

Query: 441 DKYSGRSRRFGFVTMKTVEDANAAIEKLNGTEIGGRVIKVNVTEKPLSIPDFSLLQAEET 620
           DKYSGRSRRF FVTM+TVEDANA IEKLNGT+IGGR IKVN+TEKPL+  D S LQ EE+
Sbjct: 114 DKYSGRSRRFAFVTMRTVEDANAVIEKLNGTQIGGREIKVNITEKPLASGDLSFLQLEES 173

Query: 621 QFVDSPYKVYVGNLAKEVTSDILKEFFSEKANAVSAKVSRVPGTSKSSGYGFVSFSSEED 800
           QFVDSP+KVYVGNLAK VTS+ILK FFSEK   +SAKVSRVPGTSKSSGYGFVSFS EED
Sbjct: 174 QFVDSPHKVYVGNLAKTVTSEILKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVSFSEEED 233

Query: 801 VETAVSSLNNALLEGQKIRVNKA 869
           VE A+SS NN+LLEGQKIRVNKA
Sbjct: 234 VEAAISSFNNSLLEGQKIRVNKA 256


>gb|ABK96373.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 255

 Score =  305 bits (782), Expect = 1e-80
 Identities = 176/261 (67%), Positives = 195/261 (74%), Gaps = 10/261 (3%)
 Frame = +3

Query: 117 MATFSSIWSPNFLQIPKPLTTKQPLQ--PSKVCVNIFH-SHP-SHISHKSAVSSPLNTK- 281
           MAT SS      L  P P +TK  L    SK    I   ++P +H    + +   LNTK 
Sbjct: 1   MATISS------LTTPLPTSTKLALSRNQSKPSFQILKPANPFNHFPKFTHLHKILNTKA 54

Query: 282 --RLYVVAEETA---VVTKSSDAERRLYVGNIPRNLKNDELQKIVEEHGAVEKVEVMYDK 446
             RL+ VAEETA    V  SS+A RRLYVGNIPR L N+EL KIVEEHGAVEK EVMYDK
Sbjct: 55  PQRLFAVAEETAPAAAVDPSSEAARRLYVGNIPRTLTNEELTKIVEEHGAVEKAEVMYDK 114

Query: 447 YSGRSRRFGFVTMKTVEDANAAIEKLNGTEIGGRVIKVNVTEKPLSIPDFSLLQAEETQF 626
           YSGRSRRF FVTMKT EDANAAIEKLNGTEIGGR IKVN+TEKPL   D   LQ++ETQF
Sbjct: 115 YSGRSRRFAFVTMKTAEDANAAIEKLNGTEIGGREIKVNITEKPLQSLDLPSLQSDETQF 174

Query: 627 VDSPYKVYVGNLAKEVTSDILKEFFSEKANAVSAKVSRVPGTSKSSGYGFVSFSSEEDVE 806
           VDSPYKVYVGNLAK V +D LK FFS+K N +SAKVSRVPGTSKSSG+GFV+FSSEEDVE
Sbjct: 175 VDSPYKVYVGNLAKTVATDTLKNFFSKKGNVLSAKVSRVPGTSKSSGFGFVTFSSEEDVE 234

Query: 807 TAVSSLNNALLEGQKIRVNKA 869
            A+SS NN+LLEGQ IRVNKA
Sbjct: 235 VAISSFNNSLLEGQPIRVNKA 255


>ref|XP_002314019.1| predicted protein [Populus trichocarpa] gi|222850427|gb|EEE87974.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  304 bits (778), Expect = 3e-80
 Identities = 175/261 (67%), Positives = 195/261 (74%), Gaps = 10/261 (3%)
 Frame = +3

Query: 117 MATFSSIWSPNFLQIPKPLTTKQPLQ--PSKVCVNIFH-SHP-SHISHKSAVSSPLNTK- 281
           MAT SS      L  P P +TK  L    SK    I   ++P +H    + +   LNTK 
Sbjct: 1   MATISS------LTTPLPTSTKLALSRNQSKPSFQILKPANPFNHFPKFTHLHKILNTKA 54

Query: 282 --RLYVVAEETA---VVTKSSDAERRLYVGNIPRNLKNDELQKIVEEHGAVEKVEVMYDK 446
             RL+ VAEETA    V  SS+A RRLYVGNIPR L N+EL KIVEEHGAVEK EVMYDK
Sbjct: 55  PQRLFAVAEETAPAAAVDPSSEAARRLYVGNIPRTLTNEELTKIVEEHGAVEKAEVMYDK 114

Query: 447 YSGRSRRFGFVTMKTVEDANAAIEKLNGTEIGGRVIKVNVTEKPLSIPDFSLLQAEETQF 626
           YSGRSRRF FVTMKT EDANAAIEKLNGTEIGGR IKVN+TEKPL   D   LQ++E+QF
Sbjct: 115 YSGRSRRFAFVTMKTAEDANAAIEKLNGTEIGGREIKVNITEKPLQSLDLPSLQSDESQF 174

Query: 627 VDSPYKVYVGNLAKEVTSDILKEFFSEKANAVSAKVSRVPGTSKSSGYGFVSFSSEEDVE 806
           VDSPYKVYVGNLAK V +D LK FFS+K N +SAKVSRVPGTSKSSG+GFV+FSSEEDVE
Sbjct: 175 VDSPYKVYVGNLAKTVATDTLKNFFSKKGNVLSAKVSRVPGTSKSSGFGFVTFSSEEDVE 234

Query: 807 TAVSSLNNALLEGQKIRVNKA 869
            A+SS NN+LLEGQ IRVNKA
Sbjct: 235 VAISSFNNSLLEGQPIRVNKA 255


>ref|XP_003531427.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Glycine
           max]
          Length = 246

 Score =  295 bits (755), Expect = 1e-77
 Identities = 160/248 (64%), Positives = 186/248 (75%), Gaps = 1/248 (0%)
 Frame = +3

Query: 129 SSIWSPNFLQIPKPLTTK-QPLQPSKVCVNIFHSHPSHISHKSAVSSPLNTKRLYVVAEE 305
           S + + NFL +  P ++    L P ++     H  P  ++ +     P        VAE+
Sbjct: 7   SFLLTSNFLSLTTPSSSSTHVLFPMRLSTT--HLRPLLLTTRHGFGRP----PFAAVAEQ 60

Query: 306 TAVVTKSSDAERRLYVGNIPRNLKNDELQKIVEEHGAVEKVEVMYDKYSGRSRRFGFVTM 485
            A  T++S   RRLYVGNIPR + N+EL KIV+EHGAVEK EVMYDKYSGRSRRF FVTM
Sbjct: 61  AATATEAS--ARRLYVGNIPRTVTNEELAKIVQEHGAVEKAEVMYDKYSGRSRRFAFVTM 118

Query: 486 KTVEDANAAIEKLNGTEIGGRVIKVNVTEKPLSIPDFSLLQAEETQFVDSPYKVYVGNLA 665
           KTVEDA A IEKLNGTEIGGR +KVNVTEKPLS PD  LLQAEE++F+DSP+KVYVGNLA
Sbjct: 119 KTVEDATAVIEKLNGTEIGGREVKVNVTEKPLSTPDLPLLQAEESEFIDSPHKVYVGNLA 178

Query: 666 KEVTSDILKEFFSEKANAVSAKVSRVPGTSKSSGYGFVSFSSEEDVETAVSSLNNALLEG 845
           K VT+D LK FFSEK   +SAKVSRVPGTSKSSGYGFV+FSSEEDVE A+SS NN+LLEG
Sbjct: 179 KTVTTDTLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEDVEAAISSFNNSLLEG 238

Query: 846 QKIRVNKA 869
           Q IRVNKA
Sbjct: 239 QTIRVNKA 246


>ref|XP_004135910.1| PREDICTED: 30S ribosomal protein 2, chloroplastic-like [Cucumis
           sativus] gi|449489082|ref|XP_004158209.1| PREDICTED: 30S
           ribosomal protein 2, chloroplastic-like [Cucumis
           sativus]
          Length = 251

 Score =  293 bits (750), Expect = 6e-77
 Identities = 159/252 (63%), Positives = 188/252 (74%), Gaps = 1/252 (0%)
 Frame = +3

Query: 117 MATFSSIWSPNFLQIPKPLTTKQPLQPSKVCVNIFHSHPSHISHKSAVSSPLNTKRLYVV 296
           MA+ SSI +P  L       T  P   S   +     HP HI  + +  +     RL+ V
Sbjct: 1   MASISSILTPTNLIHSSKKPTDIPQTLSSQFLRPISFHPPHILLRISPVAAKPPTRLFAV 60

Query: 297 AEETAVVTKSSDAERRLYVGNIPRNLKNDELQKIVEEHGAVEKVEVMYDKYSGRSRRFGF 476
           AE  A    SS AER+LY+GNIPRN+ N+EL +IV+EHGAVEK EVMYDKYSGRSRRF F
Sbjct: 61  AE-VATQGASSVAERKLYIGNIPRNVNNEELTRIVQEHGAVEKAEVMYDKYSGRSRRFAF 119

Query: 477 VTMKTVEDANAAIEKLNGTEIGGRVIKVNVTEKP-LSIPDFSLLQAEETQFVDSPYKVYV 653
           VTMKTVEDANAAIEKLN TE+GGR IKVN+TEKP ++  D S LQAEE+QF+DSPYKVYV
Sbjct: 120 VTMKTVEDANAAIEKLNETEVGGRKIKVNITEKPVVNTVDMSFLQAEESQFIDSPYKVYV 179

Query: 654 GNLAKEVTSDILKEFFSEKANAVSAKVSRVPGTSKSSGYGFVSFSSEEDVETAVSSLNNA 833
           GN++  V+++ LK FFSEK   +SAKVSRVPGTSKSSGYGFV+FSSEE+V+ A+SS NNA
Sbjct: 180 GNISSTVSTETLKNFFSEKGKVLSAKVSRVPGTSKSSGYGFVTFSSEEEVDAAISSFNNA 239

Query: 834 LLEGQKIRVNKA 869
           LLEGQ IRVNKA
Sbjct: 240 LLEGQPIRVNKA 251