BLASTX nr result
ID: Cnidium21_contig00000871
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00000871
(1316 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding prote... 516 e-144
ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding prote... 511 e-142
emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum] 502 e-140
ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional ... 499 e-139
ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding prote... 499 e-139
>ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
2 [Vitis vinifera]
Length = 418
Score = 516 bits (1328), Expect = e-144
Identities = 261/340 (76%), Positives = 283/340 (83%), Gaps = 4/340 (1%)
Frame = -3
Query: 1272 GSGGENRTIWVGDLHNWMDEDYLRNCFASTGEVASIKVIRNKQNGFSEGYGFVEFFTHAA 1093
GS +NRTIWVGDLHNWMDE+YL +CFA+TGE+AS+KVIRNKQ G SEGYGFVEFF+HAA
Sbjct: 78 GSNADNRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAA 137
Query: 1092 AEKVLQSYACIPMPNANQPFRLNWATFSMGDKRSNNGSDLSIFVGDLASDVTDTLLHKTF 913
AEKVLQ YA + MPN +QPFRLNWATFSMGDKRS+NG DLSIFVGDLASDV+D+LLH+TF
Sbjct: 138 AEKVLQGYAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETF 197
Query: 912 ASKYPSVKAAKVVIDANTGRSKGYGFVRFGDDSERSQAMTEMNGTYCSTRAMRIGAATPR 733
A KYPSVKAAKVV DANTGRSKGYGFVRFGD++ERSQAMTEMNG YCS+R MRIGAATPR
Sbjct: 198 AGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPR 257
Query: 732 KXXXXXXXXXXXXXXXSNG---EGDGDSTNTTIFVGGLDANVSDEDLRQPFSQYGEIVSV 562
K SNG + DGDS NTTIFVGGLD NVSDEDLRQPFSQYGEIVSV
Sbjct: 258 KSSGYQQQYSSHGGYASNGASVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSV 317
Query: 561 KIPVGKGCGFVQFANRNNAEEALQNLNGTAIGKQTVRLSWGRNPANKQFRAEYGNQWTXX 382
KIPVGKGCGFVQFANRNNAE+ALQ LNGT IGKQTVRLSWGRNPANKQ RA++GNQW+
Sbjct: 318 KIPVGKGCGFVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQWSGA 377
Query: 381 XXXXXXXXXXXYAM-PAHDPRMYAAAAYGASYPVYGTHQQ 265
YA+ P HDP MY AAAYGA YPVYG HQQ
Sbjct: 378 YYGGQVYDGYGYALPPPHDPTMY-AAAYGA-YPVYGNHQQ 415
Score = 64.7 bits (156), Expect = 5e-08
Identities = 49/210 (23%), Positives = 95/210 (45%), Gaps = 9/210 (4%)
Frame = -3
Query: 999 KRSNNGSDLSIFVGDLASDVTDTLLHKTFASKYPSVKAAKVVIDANTGRSKGYGFVRFGD 820
++ +N + +I+VGDL + + + LH FA+ + + KV+ + TG S+GYGFV F
Sbjct: 76 QQGSNADNRTIWVGDLHNWMDENYLHSCFAAT-GELASMKVIRNKQTGSSEGYGFVEFFS 134
Query: 819 DSERSQAMTEMNGTYC--STRAMRIGAATPRKXXXXXXXXXXXXXXXSNGEGDGDSTNTT 646
+ + + G + + R+ AT + + + +
Sbjct: 135 HAAAEKVLQGYAGVLMPNTDQPFRLNWAT----------------FSMGDKRSDNGPDLS 178
Query: 645 IFVGGLDANVSDEDLRQPFS-QYGEIVSVKIPV------GKGCGFVQFANRNNAEEALQN 487
IFVG L ++VSD L + F+ +Y + + K+ KG GFV+F + N +A+
Sbjct: 179 IFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTE 238
Query: 486 LNGTAIGKQTVRLSWGRNPANKQFRAEYGN 397
+NG + +R+ + ++ +Y +
Sbjct: 239 MNGVYCSSRPMRIGAATPRKSSGYQQQYSS 268
>ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
1 [Vitis vinifera]
Length = 409
Score = 511 bits (1317), Expect = e-142
Identities = 259/337 (76%), Positives = 282/337 (83%), Gaps = 1/337 (0%)
Frame = -3
Query: 1272 GSGGENRTIWVGDLHNWMDEDYLRNCFASTGEVASIKVIRNKQNGFSEGYGFVEFFTHAA 1093
GS +NRTIWVGDLHNWMDE+YL +CFA+TGE+AS+KVIRNKQ G SEGYGFVEFF+HAA
Sbjct: 78 GSNADNRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAA 137
Query: 1092 AEKVLQSYACIPMPNANQPFRLNWATFSMGDKRSNNGSDLSIFVGDLASDVTDTLLHKTF 913
AEKVLQ YA + MPN +QPFRLNWATFSMGDKRS+NG DLSIFVGDLASDV+D+LLH+TF
Sbjct: 138 AEKVLQGYAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETF 197
Query: 912 ASKYPSVKAAKVVIDANTGRSKGYGFVRFGDDSERSQAMTEMNGTYCSTRAMRIGAATPR 733
A KYPSVKAAKVV DANTGRSKGYGFVRFGD++ERSQAMTEMNG YCS+R MRIGAATPR
Sbjct: 198 AGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPR 257
Query: 732 KXXXXXXXXXXXXXXXSNGEGDGDSTNTTIFVGGLDANVSDEDLRQPFSQYGEIVSVKIP 553
K S+ + DGDS NTTIFVGGLD NVSDEDLRQPFSQYGEIVSVKIP
Sbjct: 258 K------SSGYQQQYSSHVQSDGDSMNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIP 311
Query: 552 VGKGCGFVQFANRNNAEEALQNLNGTAIGKQTVRLSWGRNPANKQFRAEYGNQWTXXXXX 373
VGKGCGFVQFANRNNAE+ALQ LNGT IGKQTVRLSWGRNPANKQ RA++GNQW+
Sbjct: 312 VGKGCGFVQFANRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYG 371
Query: 372 XXXXXXXXYAM-PAHDPRMYAAAAYGASYPVYGTHQQ 265
YA+ P HDP MY AAAYGA YPVYG HQQ
Sbjct: 372 GQVYDGYGYALPPPHDPTMY-AAAYGA-YPVYGNHQQ 406
Score = 64.7 bits (156), Expect = 5e-08
Identities = 49/210 (23%), Positives = 95/210 (45%), Gaps = 9/210 (4%)
Frame = -3
Query: 999 KRSNNGSDLSIFVGDLASDVTDTLLHKTFASKYPSVKAAKVVIDANTGRSKGYGFVRFGD 820
++ +N + +I+VGDL + + + LH FA+ + + KV+ + TG S+GYGFV F
Sbjct: 76 QQGSNADNRTIWVGDLHNWMDENYLHSCFAAT-GELASMKVIRNKQTGSSEGYGFVEFFS 134
Query: 819 DSERSQAMTEMNGTYC--STRAMRIGAATPRKXXXXXXXXXXXXXXXSNGEGDGDSTNTT 646
+ + + G + + R+ AT + + + +
Sbjct: 135 HAAAEKVLQGYAGVLMPNTDQPFRLNWAT----------------FSMGDKRSDNGPDLS 178
Query: 645 IFVGGLDANVSDEDLRQPFS-QYGEIVSVKIPV------GKGCGFVQFANRNNAEEALQN 487
IFVG L ++VSD L + F+ +Y + + K+ KG GFV+F + N +A+
Sbjct: 179 IFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTE 238
Query: 486 LNGTAIGKQTVRLSWGRNPANKQFRAEYGN 397
+NG + +R+ + ++ +Y +
Sbjct: 239 MNGVYCSSRPMRIGAATPRKSSGYQQQYSS 268
>emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum]
Length = 456
Score = 502 bits (1292), Expect = e-140
Identities = 259/343 (75%), Positives = 277/343 (80%), Gaps = 8/343 (2%)
Frame = -3
Query: 1269 SGGENRTIWVGDLHNWMDEDYLRNCFASTGEVASIKVIRNKQNGFSEGYGFVEFFTHAAA 1090
+ ENRTIWVGDL NWMDEDYLRNCFAST EVASIKVIRNKQ GFSEGYGFVEFFTHAAA
Sbjct: 112 NNNENRTIWVGDLLNWMDEDYLRNCFASTNEVASIKVIRNKQTGFSEGYGFVEFFTHAAA 171
Query: 1089 EKVLQSYACIPMPNANQPFRLNWATFSMGDKRSNNGSDLSIFVGDLASDVTDTLLHKTFA 910
EKVLQ+Y+C+ MPN +QPFRLNWATFSMGDKR+NNGSDLSIFVGDLA+DVTDTLLH+TFA
Sbjct: 172 EKVLQTYSCMTMPNVDQPFRLNWATFSMGDKRANNGSDLSIFVGDLAADVTDTLLHETFA 231
Query: 909 SKYPSVKAAKVVIDANTGRSKGYGFVRFGDDSERSQAMTEMNGTYCSTRAMRIGAATPRK 730
+KYPSVKAAKVV DANTGRSKGYGFVRFGDD+ERSQAMTEMNG YCS+R MRIGAATPRK
Sbjct: 232 TKYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRK 291
Query: 729 XXXXXXXXXXXXXXXSNG-----EGDGDSTNTTIFVGGLDANVSDEDLRQPFSQYGEIVS 565
+ G + D DSTNTTIFVGGLD NVSDEDLRQPF QYGEIVS
Sbjct: 292 SSGYQQQYSSQGGYSNGGPAQGSQPDADSTNTTIFVGGLDPNVSDEDLRQPFVQYGEIVS 351
Query: 564 VKIPVGKGCGFVQFANRNNAEEALQNLNGTAIGKQTVRLSWGRNPANKQFRAEYGNQWTX 385
VKIPV + QFANRN+AEEALQ LNGT IGKQTVRL WGRNPANKQ R ++GNQWT
Sbjct: 352 VKIPVEERVWVWQFANRNDAEEALQKLNGTFIGKQTVRLFWGRNPANKQSRGDFGNQWTG 411
Query: 384 XXXXXXXXXXXXYAM-PAHDPRMY--AAAAYGASYPVYGTHQQ 265
YA P HDP MY AAAAYGA YP+YGTHQQ
Sbjct: 412 PYYGGHFYDGYGYAFPPQHDPGMYAAAAAAYGA-YPIYGTHQQ 453
>ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 401
Score = 499 bits (1286), Expect = e-139
Identities = 252/337 (74%), Positives = 277/337 (82%), Gaps = 1/337 (0%)
Frame = -3
Query: 1272 GSGGENRTIWVGDLHNWMDEDYLRNCFASTGEVASIKVIRNKQNGFSEGYGFVEFFTHAA 1093
GSGGEN+TIW+GDLH+WMDE+YL CFASTGE++SIKVIRNKQ G SEGYGFVEF++HA
Sbjct: 67 GSGGENKTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHAT 126
Query: 1092 AEKVLQSYACIPMPNANQPFRLNWATFSMGDKRSNNGSDLSIFVGDLASDVTDTLLHKTF 913
AEKVLQ+YA I MPNA QPFRLNWATFS GDK S+N DLSIFVGDLA+DVTD+LLH+TF
Sbjct: 127 AEKVLQNYAGILMPNAEQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETF 186
Query: 912 ASKYPSVKAAKVVIDANTGRSKGYGFVRFGDDSERSQAMTEMNGTYCSTRAMRIGAATPR 733
AS YPSVKAAKVV DANTGRSKGYGFVRFGDD+ER+QAMT+MNG YCS+R MRIGAATPR
Sbjct: 187 ASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTQMNGVYCSSRPMRIGAATPR 246
Query: 732 KXXXXXXXXXXXXXXXSNGEGDGDSTNTTIFVGGLDANVSDEDLRQPFSQYGEIVSVKIP 553
K + + DSTNTTIFVGGLD NVSDEDLRQPFSQYGEIVSVKIP
Sbjct: 247 KSSGHQQGGLSNGTA---NQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIP 303
Query: 552 VGKGCGFVQFANRNNAEEALQNLNGTAIGKQTVRLSWGRNPANKQFRAEYGNQWTXXXXX 373
VGKGCGFVQFANRNNAEEALQ LNGT IGKQTVRLSWGRNPANKQFR ++G+ WT
Sbjct: 304 VGKGCGFVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGSPWTGAYYG 363
Query: 372 XXXXXXXXYAM-PAHDPRMYAAAAYGASYPVYGTHQQ 265
YA+ P HDP +Y AAAYGA YP+YG HQQ
Sbjct: 364 APMYDGYGYALPPRHDPSIY-AAAYGA-YPLYGGHQQ 398
Score = 66.2 bits (160), Expect = 2e-08
Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 9/193 (4%)
Frame = -3
Query: 999 KRSNNGSDLSIFVGDLASDVTDTLLHKTFASKYPSVKAAKVVIDANTGRSKGYGFVRFGD 820
+ + G + +I++GDL + + LH+ FAS + + KV+ + TG S+GYGFV F
Sbjct: 65 QNGSGGENKTIWIGDLHHWMDENYLHRCFAST-GEISSIKVIRNKQTGLSEGYGFVEFYS 123
Query: 819 DSERSQAMTEMNGTYC--STRAMRIGAATPRKXXXXXXXXXXXXXXXSNGEGDGDSTNTT 646
+ + + G + + R+ AT + +G + + +
Sbjct: 124 HATAEKVLQNYAGILMPNAEQPFRLNWAT----------------FSTGDKGSDNVPDLS 167
Query: 645 IFVGGLDANVSDEDLRQPF-SQYGEIVSVKIPV------GKGCGFVQFANRNNAEEALQN 487
IFVG L A+V+D L + F S Y + + K+ KG GFV+F + N +A+
Sbjct: 168 IFVGDLAADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTQ 227
Query: 486 LNGTAIGKQTVRL 448
+NG + +R+
Sbjct: 228 MNGVYCSSRPMRI 240
>ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 425
Score = 499 bits (1285), Expect = e-139
Identities = 251/337 (74%), Positives = 277/337 (82%), Gaps = 1/337 (0%)
Frame = -3
Query: 1272 GSGGENRTIWVGDLHNWMDEDYLRNCFASTGEVASIKVIRNKQNGFSEGYGFVEFFTHAA 1093
GSGGEN+TIW+GDLH+WMDE+YL CFASTGE++SIKVIRNKQ G SEGYGFVEF++HA
Sbjct: 91 GSGGENKTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHAT 150
Query: 1092 AEKVLQSYACIPMPNANQPFRLNWATFSMGDKRSNNGSDLSIFVGDLASDVTDTLLHKTF 913
AEKVLQ+YA I MPN QPFRLNWATFS GDK S+N DLSIFVGDLA+DVTD+LLH+TF
Sbjct: 151 AEKVLQNYAGILMPNTEQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETF 210
Query: 912 ASKYPSVKAAKVVIDANTGRSKGYGFVRFGDDSERSQAMTEMNGTYCSTRAMRIGAATPR 733
AS YPSVKAAKVV DANTGRSKGYGFVRFGDD++R+QAMT+MNG YCS+R MRIGAATPR
Sbjct: 211 ASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNQRTQAMTQMNGVYCSSRPMRIGAATPR 270
Query: 732 KXXXXXXXXXXXXXXXSNGEGDGDSTNTTIFVGGLDANVSDEDLRQPFSQYGEIVSVKIP 553
K + + DSTNTTIFVGGLD NVSDEDLRQPFSQYGEIVSVKIP
Sbjct: 271 KSSGHQQGGQSNGTA---NQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIP 327
Query: 552 VGKGCGFVQFANRNNAEEALQNLNGTAIGKQTVRLSWGRNPANKQFRAEYGNQWTXXXXX 373
VGKGCGFVQFANRNNAEEALQ LNGT+IGKQTVRLSWGRNPANKQFR ++GN WT
Sbjct: 328 VGKGCGFVQFANRNNAEEALQKLNGTSIGKQTVRLSWGRNPANKQFRMDFGNPWTGAYYG 387
Query: 372 XXXXXXXXYAM-PAHDPRMYAAAAYGASYPVYGTHQQ 265
YA+ P HDP +Y AAAYGA YP+YG HQQ
Sbjct: 388 APMYDGYGYALTPRHDPSIY-AAAYGA-YPLYGGHQQ 422
Score = 66.2 bits (160), Expect = 2e-08
Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 9/193 (4%)
Frame = -3
Query: 999 KRSNNGSDLSIFVGDLASDVTDTLLHKTFASKYPSVKAAKVVIDANTGRSKGYGFVRFGD 820
+ + G + +I++GDL + + LH+ FAS + + KV+ + TG S+GYGFV F
Sbjct: 89 QNGSGGENKTIWIGDLHHWMDENYLHRCFAST-GEISSIKVIRNKQTGLSEGYGFVEFYS 147
Query: 819 DSERSQAMTEMNGTYC--STRAMRIGAATPRKXXXXXXXXXXXXXXXSNGEGDGDSTNTT 646
+ + + G + + R+ AT + +G + + +
Sbjct: 148 HATAEKVLQNYAGILMPNTEQPFRLNWAT----------------FSTGDKGSDNVPDLS 191
Query: 645 IFVGGLDANVSDEDLRQPF-SQYGEIVSVKIPV------GKGCGFVQFANRNNAEEALQN 487
IFVG L A+V+D L + F S Y + + K+ KG GFV+F + N +A+
Sbjct: 192 IFVGDLAADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNQRTQAMTQ 251
Query: 486 LNGTAIGKQTVRL 448
+NG + +R+
Sbjct: 252 MNGVYCSSRPMRI 264