BLASTX nr result

ID: Cnidium21_contig00000870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000870
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300110.1| predicted protein [Populus trichocarpa] gi|2...   106   3e-21
gb|ADB02901.1| protein transport protein SEC61 subunit gamma [Ja...   104   7e-21
ref|XP_002270423.1| PREDICTED: protein transport protein Sec61 s...   103   2e-20
ref|XP_002509505.1| sec61 gamma subunit, putative [Ricinus commu...   102   3e-20
ref|XP_004145664.1| PREDICTED: protein transport protein Sec61 s...   102   4e-20

>ref|XP_002300110.1| predicted protein [Populus trichocarpa] gi|222847368|gb|EEE84915.1|
           predicted protein [Populus trichocarpa]
          Length = 69

 Score =  106 bits (264), Expect = 3e-21
 Identities = 55/68 (80%), Positives = 56/68 (82%)
 Frame = -1

Query: 465 MDAIDSVFDPLREFSKDSYRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXVKLIFIP 286
           MDAIDSVFDPLREFSKDS RLVKRCHKPDRKEFTKVAFRTAI           VKLIFIP
Sbjct: 1   MDAIDSVFDPLREFSKDSVRLVKRCHKPDRKEFTKVAFRTAIGFVVMGFVGFFVKLIFIP 60

Query: 285 INNIIVGA 262
           INNIIVG+
Sbjct: 61  INNIIVGS 68


>gb|ADB02901.1| protein transport protein SEC61 subunit gamma [Jatropha curcas]
          Length = 69

 Score =  104 bits (260), Expect = 7e-21
 Identities = 53/69 (76%), Positives = 57/69 (82%)
 Frame = -1

Query: 465 MDAIDSVFDPLREFSKDSYRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXVKLIFIP 286
           MDA+DSVFDPLREF+KDS RLVKRCHKPDRKEFTKVAFRTAI           VKLIFIP
Sbjct: 1   MDALDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAFRTAIGFVVMGFVGFFVKLIFIP 60

Query: 285 INNIIVGAT 259
           INNIIVG++
Sbjct: 61  INNIIVGSS 69


>ref|XP_002270423.1| PREDICTED: protein transport protein Sec61 subunit gamma isoform 1
           [Vitis vinifera] gi|359488485|ref|XP_003633765.1|
           PREDICTED: protein transport protein Sec61 subunit gamma
           isoform 2 [Vitis vinifera] gi|147815338|emb|CAN67771.1|
           hypothetical protein VITISV_010522 [Vitis vinifera]
           gi|296082338|emb|CBI21343.3| unnamed protein product
           [Vitis vinifera]
          Length = 69

 Score =  103 bits (256), Expect = 2e-20
 Identities = 52/68 (76%), Positives = 56/68 (82%)
 Frame = -1

Query: 465 MDAIDSVFDPLREFSKDSYRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXVKLIFIP 286
           MDAID+VFDP+REF+KDS RLVKRCHKPDRKEFTKVAFRTAI           VKLIFIP
Sbjct: 1   MDAIDNVFDPMREFAKDSVRLVKRCHKPDRKEFTKVAFRTAIGFVVMGFVGFFVKLIFIP 60

Query: 285 INNIIVGA 262
           INNIIVG+
Sbjct: 61  INNIIVGS 68


>ref|XP_002509505.1| sec61 gamma subunit, putative [Ricinus communis]
           gi|223549404|gb|EEF50892.1| sec61 gamma subunit,
           putative [Ricinus communis]
          Length = 69

 Score =  102 bits (255), Expect = 3e-20
 Identities = 53/68 (77%), Positives = 55/68 (80%)
 Frame = -1

Query: 465 MDAIDSVFDPLREFSKDSYRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXVKLIFIP 286
           MDAIDSV DPLR+FSKDS RLVKRCHKPDRKEFTKVAFRTAI           VKLIFIP
Sbjct: 1   MDAIDSVLDPLRDFSKDSVRLVKRCHKPDRKEFTKVAFRTAIGFVVMGFVGFFVKLIFIP 60

Query: 285 INNIIVGA 262
           INNIIVG+
Sbjct: 61  INNIIVGS 68


>ref|XP_004145664.1| PREDICTED: protein transport protein Sec61 subunit gamma-like
           isoform 1 [Cucumis sativus]
           gi|449455854|ref|XP_004145665.1| PREDICTED: protein
           transport protein Sec61 subunit gamma-like isoform 2
           [Cucumis sativus] gi|449502009|ref|XP_004161518.1|
           PREDICTED: protein transport protein Sec61 subunit
           gamma-like isoform 1 [Cucumis sativus]
           gi|449502012|ref|XP_004161519.1| PREDICTED: protein
           transport protein Sec61 subunit gamma-like isoform 2
           [Cucumis sativus]
          Length = 69

 Score =  102 bits (254), Expect = 4e-20
 Identities = 53/68 (77%), Positives = 55/68 (80%)
 Frame = -1

Query: 465 MDAIDSVFDPLREFSKDSYRLVKRCHKPDRKEFTKVAFRTAIXXXXXXXXXXXVKLIFIP 286
           MDAIDSVFDPLREF+KDS RLVKRCHKPDRKEFTKVA RTAI           VKLIFIP
Sbjct: 1   MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 285 INNIIVGA 262
           INNIIVG+
Sbjct: 61  INNIIVGS 68


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