BLASTX nr result

ID: Cnidium21_contig00000857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000857
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001189748.1| Golgi SNARE 12 protein [Arabidopsis thaliana...   102   5e-29
ref|NP_182045.1| Golgi SNARE 12 protein [Arabidopsis thaliana] g...   102   5e-29
ref|XP_002882001.1| hypothetical protein ARALYDRAFT_903960 [Arab...   100   2e-28
ref|XP_002280376.1| PREDICTED: Golgi SNARE 12 protein [Vitis vin...    95   7e-28
emb|CBI38885.3| unnamed protein product [Vitis vinifera]               95   7e-28

>ref|NP_001189748.1| Golgi SNARE 12 protein [Arabidopsis thaliana]
           gi|378405178|sp|O22151.2|GOS12_ARATH RecName: Full=Golgi
           SNAP receptor complex member 1-2; AltName: Full=Golgi
           SNARE 12 protein; Short=AtGOS12
           gi|330255431|gb|AEC10525.1| Golgi SNARE 12 protein
           [Arabidopsis thaliana]
          Length = 257

 Score =  102 bits (253), Expect(2) = 5e-29
 Identities = 50/55 (90%), Positives = 52/55 (94%)
 Frame = +2

Query: 326 GYVDTTSPTAGSGRSWKSTEMEIQSLLEKLLDVNDSMSRCAASSAPTTSVTQKLA 490
           GYVDT SPT GSGRSWKS EMEIQSLLEKLLD+NDSMSRCAAS+APTTSVTQKLA
Sbjct: 63  GYVDTGSPTVGSGRSWKSMEMEIQSLLEKLLDINDSMSRCAASAAPTTSVTQKLA 117



 Score = 50.8 bits (120), Expect(2) = 5e-29
 Identities = 23/25 (92%), Positives = 25/25 (100%)
 Frame = +1

Query: 133 NLQESGWEELRKEARKIEGDLDVKL 207
           +LQESGWEELR+EARKIEGDLDVKL
Sbjct: 7   DLQESGWEELRREARKIEGDLDVKL 31


>ref|NP_182045.1| Golgi SNARE 12 protein [Arabidopsis thaliana]
           gi|13898895|gb|AAK48905.1|AF357529_1 Golgi SNARE 12
           protein [Arabidopsis thaliana] gi|2583133|gb|AAB82642.1|
           putative cis-Golgi SNARE protein [Arabidopsis thaliana]
           gi|88196757|gb|ABD43021.1| At2g45200 [Arabidopsis
           thaliana] gi|330255430|gb|AEC10524.1| Golgi SNARE 12
           protein [Arabidopsis thaliana]
          Length = 239

 Score =  102 bits (253), Expect(2) = 5e-29
 Identities = 50/55 (90%), Positives = 52/55 (94%)
 Frame = +2

Query: 326 GYVDTTSPTAGSGRSWKSTEMEIQSLLEKLLDVNDSMSRCAASSAPTTSVTQKLA 490
           GYVDT SPT GSGRSWKS EMEIQSLLEKLLD+NDSMSRCAAS+APTTSVTQKLA
Sbjct: 45  GYVDTGSPTVGSGRSWKSMEMEIQSLLEKLLDINDSMSRCAASAAPTTSVTQKLA 99



 Score = 50.8 bits (120), Expect(2) = 5e-29
 Identities = 23/25 (92%), Positives = 25/25 (100%)
 Frame = +1

Query: 133 NLQESGWEELRKEARKIEGDLDVKL 207
           +LQESGWEELR+EARKIEGDLDVKL
Sbjct: 7   DLQESGWEELRREARKIEGDLDVKL 31


>ref|XP_002882001.1| hypothetical protein ARALYDRAFT_903960 [Arabidopsis lyrata subsp.
           lyrata] gi|297327840|gb|EFH58260.1| hypothetical protein
           ARALYDRAFT_903960 [Arabidopsis lyrata subsp. lyrata]
          Length = 239

 Score =  100 bits (248), Expect(2) = 2e-28
 Identities = 49/55 (89%), Positives = 51/55 (92%)
 Frame = +2

Query: 326 GYVDTTSPTAGSGRSWKSTEMEIQSLLEKLLDVNDSMSRCAASSAPTTSVTQKLA 490
           GYVD  SPT GSGRSWKS EMEIQSLLEKLLD+NDSMSRCAAS+APTTSVTQKLA
Sbjct: 45  GYVDAGSPTVGSGRSWKSMEMEIQSLLEKLLDINDSMSRCAASAAPTTSVTQKLA 99



 Score = 50.8 bits (120), Expect(2) = 2e-28
 Identities = 23/25 (92%), Positives = 25/25 (100%)
 Frame = +1

Query: 133 NLQESGWEELRKEARKIEGDLDVKL 207
           +LQESGWEELR+EARKIEGDLDVKL
Sbjct: 7   DLQESGWEELRREARKIEGDLDVKL 31


>ref|XP_002280376.1| PREDICTED: Golgi SNARE 12 protein [Vitis vinifera]
          Length = 239

 Score = 95.1 bits (235), Expect(2) = 7e-28
 Identities = 47/55 (85%), Positives = 49/55 (89%)
 Frame = +2

Query: 326 GYVDTTSPTAGSGRSWKSTEMEIQSLLEKLLDVNDSMSRCAASSAPTTSVTQKLA 490
           GYVDT SPT  S RSWKS EMEIQSLLEKLLD ND+MSRCAAS+APTTSVTQKLA
Sbjct: 45  GYVDTGSPTVSSSRSWKSMEMEIQSLLEKLLDTNDAMSRCAASAAPTTSVTQKLA 99



 Score = 53.9 bits (128), Expect(2) = 7e-28
 Identities = 27/29 (93%), Positives = 27/29 (93%), Gaps = 2/29 (6%)
 Frame = +1

Query: 127 DPNL--QESGWEELRKEARKIEGDLDVKL 207
           DPNL  QESGWEELRKEARKIEGDLDVKL
Sbjct: 3   DPNLDLQESGWEELRKEARKIEGDLDVKL 31


>emb|CBI38885.3| unnamed protein product [Vitis vinifera]
          Length = 238

 Score = 95.1 bits (235), Expect(2) = 7e-28
 Identities = 47/55 (85%), Positives = 49/55 (89%)
 Frame = +2

Query: 326 GYVDTTSPTAGSGRSWKSTEMEIQSLLEKLLDVNDSMSRCAASSAPTTSVTQKLA 490
           GYVDT SPT  S RSWKS EMEIQSLLEKLLD ND+MSRCAAS+APTTSVTQKLA
Sbjct: 44  GYVDTGSPTVSSSRSWKSMEMEIQSLLEKLLDTNDAMSRCAASAAPTTSVTQKLA 98



 Score = 53.9 bits (128), Expect(2) = 7e-28
 Identities = 27/29 (93%), Positives = 27/29 (93%), Gaps = 2/29 (6%)
 Frame = +1

Query: 127 DPNL--QESGWEELRKEARKIEGDLDVKL 207
           DPNL  QESGWEELRKEARKIEGDLDVKL
Sbjct: 2   DPNLDLQESGWEELRKEARKIEGDLDVKL 30


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