BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000825
         (1155 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264295.1| PREDICTED: chlorophyll a-b binding protein C...   412   e-112
emb|CAA43590.1| Type I (26 kD) CP29 polypeptide [Solanum lycoper...   410   e-112
gb|AAM65487.1| chlorophyll a/b-binding protein-like [Arabidopsis...   410   e-112
ref|NP_192772.1| chlorophyll a-b binding protein CP26 [Arabidops...   410   e-112
ref|XP_002872508.1| hypothetical protein ARALYDRAFT_489877 [Arab...   410   e-112

>ref|XP_002264295.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic
           [Vitis vinifera] gi|147770824|emb|CAN76428.1|
           hypothetical protein VITISV_023565 [Vitis vinifera]
           gi|297734735|emb|CBI16969.3| unnamed protein product
           [Vitis vinifera]
          Length = 290

 Score =  412 bits (1058), Expect = e-112
 Identities = 209/274 (76%), Positives = 215/274 (78%), Gaps = 4/274 (1%)
 Frame = +3

Query: 105 EMLGNTLNXXXXXXXXXXXXXXX--KTVALFGXXXXXXXXXXXXXXE--SDELAKWYGPE 272
           EMLGN LN                 KTVALF                   +ELAKWYGP+
Sbjct: 17  EMLGNPLNFSGASRTAPSASSPATFKTVALFSKKKAAPAKAKPAPVSPADEELAKWYGPD 76

Query: 273 RRIYLPEGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAYELIHARWAMLGAA 452
           RRI+LPEGLLDRSE+P YL GEVPGDYGYDPFGL KKPEDFAKYQAYELIHARWAMLGAA
Sbjct: 77  RRIFLPEGLLDRSEIPAYLTGEVPGDYGYDPFGLSKKPEDFAKYQAYELIHARWAMLGAA 136

Query: 453 GFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINXXXXXXXXXXXXXXXX 632
           GFIIPEAFNK+GANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN                
Sbjct: 137 GFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLIFAVVAEVVLVGGAE 196

Query: 633 YYRITNGLDLEDKLHPGGPFDPLGLADDPDQAALLKVKEIKNGRLAMFAMLGFFIQAYVT 812
           YYRI NGLDLEDKLHPGGPFDPLGLA+DPDQAALLKVKEIKNGRLAMFAMLGFFIQAYVT
Sbjct: 197 YYRIINGLDLEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAMLGFFIQAYVT 256

Query: 813 GEGPVENLAAHLSDPFGNNLLTVIGGAAERAPTL 914
           GEGPVENLAAHLSDPFGNNLLTVI G AERAPTL
Sbjct: 257 GEGPVENLAAHLSDPFGNNLLTVIAGTAERAPTL 290


>emb|CAA43590.1| Type I (26 kD) CP29 polypeptide [Solanum lycopersicum]
          Length = 286

 Score =  410 bits (1055), Expect = e-112
 Identities = 195/224 (87%), Positives = 204/224 (91%)
 Frame = +3

Query: 243 DELAKWYGPERRIYLPEGLLDRSEVPEYLNGEVPGDYGYDPFGLGKKPEDFAKYQAYELI 422
           DELAKWYGP+RRI+LPEGLLDRSE+PEYLNGEVPG+YGYDPFGL KKPEDFAKYQAYELI
Sbjct: 63  DELAKWYGPDRRIFLPEGLLDRSEIPEYLNGEVPGEYGYDPFGLSKKPEDFAKYQAYELI 122

Query: 423 HARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINXXXXXX 602
           HARWAMLGAAGFIIPEAFNK+GANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN      
Sbjct: 123 HARWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLILAVV 182

Query: 603 XXXXXXXXXXYYRITNGLDLEDKLHPGGPFDPLGLADDPDQAALLKVKEIKNGRLAMFAM 782
                     YYRI NGLDLEDKLHPGGPFDPLGLA DPDQAA+LKVKEIKNGRLAMF+M
Sbjct: 183 AEVVLVGGAEYYRIINGLDLEDKLHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMFSM 242

Query: 783 LGFFIQAYVTGEGPVENLAAHLSDPFGNNLLTVIGGAAERAPTL 914
           LGFFIQAYVTG+GPVENLAAHLSDPFGNNLLTVIGGA+ER PTL
Sbjct: 243 LGFFIQAYVTGQGPVENLAAHLSDPFGNNLLTVIGGASERVPTL 286


>gb|AAM65487.1| chlorophyll a/b-binding protein-like [Arabidopsis thaliana]
          Length = 280

 Score =  410 bits (1054), Expect = e-112
 Identities = 200/247 (80%), Positives = 207/247 (83%)
 Frame = +3

Query: 174 KTVALFGXXXXXXXXXXXXXXESDELAKWYGPERRIYLPEGLLDRSEVPEYLNGEVPGDY 353
           KTVALF                SDELAKWYGP+RRI+LP+GLLDRSE+PEYLNGEV GDY
Sbjct: 34  KTVALFSKKKPAPAKSKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDY 93

Query: 354 GYDPFGLGKKPEDFAKYQAYELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGAL 533
           GYDPFGLGKKPE+FAKYQA+ELIHARWAMLGAAGFIIPEA NKYGANCGPEAVWFKTGAL
Sbjct: 94  GYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGAL 153

Query: 534 LLDGNTLNYFGKNIPINXXXXXXXXXXXXXXXXYYRITNGLDLEDKLHPGGPFDPLGLAD 713
           LLDGNTLNYFGKNIPIN                YYRITNGLD EDKLHPGGPFDPLGLA 
Sbjct: 154 LLDGNTLNYFGKNIPINLVLAVVAEVVLLGGSEYYRITNGLDFEDKLHPGGPFDPLGLAK 213

Query: 714 DPDQAALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAAHLSDPFGNNLLTVIGGA 893
           DP+Q ALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLA HLSDPFGNNLLTVI G 
Sbjct: 214 DPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGT 273

Query: 894 AERAPTL 914
           AERAPTL
Sbjct: 274 AERAPTL 280


>ref|NP_192772.1| chlorophyll a-b binding protein CP26 [Arabidopsis thaliana]
           gi|28558077|sp|Q9XF89.1|CB5_ARATH RecName:
           Full=Chlorophyll a-b binding protein CP26,
           chloroplastic; AltName: Full=LHCB5; AltName:
           Full=LHCIIc; AltName: Full=Light-harvesting complex II
           protein 5; Flags: Precursor
           gi|4741958|gb|AAD28776.1|AF134129_1 Lhcb5 protein
           [Arabidopsis thaliana]
           gi|11908106|gb|AAG41482.1|AF326900_1 putative
           chlorophyll a/b-binding protein [Arabidopsis thaliana]
           gi|12642916|gb|AAK00400.1|AF339718_1 putative
           chlorophyll a/b-binding protein [Arabidopsis thaliana]
           gi|14190463|gb|AAK55712.1|AF380631_1
           AT4g10340/F24G24_140 [Arabidopsis thaliana]
           gi|15983446|gb|AAL11591.1|AF424597_1
           AT4g10340/F24G24_140 [Arabidopsis thaliana]
           gi|4538963|emb|CAB39787.1| chlorophyll a/b-binding
           protein-like [Arabidopsis thaliana]
           gi|7267731|emb|CAB78157.1| chlorophyll a/b-binding
           protein-like [Arabidopsis thaliana]
           gi|15809718|gb|AAL06787.1| AT4g10340/F24G24_140
           [Arabidopsis thaliana] gi|332657469|gb|AEE82869.1|
           chlorophyll a-b binding protein CP26 [Arabidopsis
           thaliana]
          Length = 280

 Score =  410 bits (1054), Expect = e-112
 Identities = 200/247 (80%), Positives = 207/247 (83%)
 Frame = +3

Query: 174 KTVALFGXXXXXXXXXXXXXXESDELAKWYGPERRIYLPEGLLDRSEVPEYLNGEVPGDY 353
           KTVALF                SDELAKWYGP+RRI+LP+GLLDRSE+PEYLNGEV GDY
Sbjct: 34  KTVALFSKKKPAPAKSKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDY 93

Query: 354 GYDPFGLGKKPEDFAKYQAYELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGAL 533
           GYDPFGLGKKPE+FAKYQA+ELIHARWAMLGAAGFIIPEA NKYGANCGPEAVWFKTGAL
Sbjct: 94  GYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGAL 153

Query: 534 LLDGNTLNYFGKNIPINXXXXXXXXXXXXXXXXYYRITNGLDLEDKLHPGGPFDPLGLAD 713
           LLDGNTLNYFGKNIPIN                YYRITNGLD EDKLHPGGPFDPLGLA 
Sbjct: 154 LLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAK 213

Query: 714 DPDQAALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAAHLSDPFGNNLLTVIGGA 893
           DP+Q ALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLA HLSDPFGNNLLTVI G 
Sbjct: 214 DPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGT 273

Query: 894 AERAPTL 914
           AERAPTL
Sbjct: 274 AERAPTL 280


>ref|XP_002872508.1| hypothetical protein ARALYDRAFT_489877 [Arabidopsis lyrata subsp.
           lyrata] gi|297318345|gb|EFH48767.1| hypothetical protein
           ARALYDRAFT_489877 [Arabidopsis lyrata subsp. lyrata]
          Length = 280

 Score =  410 bits (1054), Expect = e-112
 Identities = 200/247 (80%), Positives = 207/247 (83%)
 Frame = +3

Query: 174 KTVALFGXXXXXXXXXXXXXXESDELAKWYGPERRIYLPEGLLDRSEVPEYLNGEVPGDY 353
           KTVALF                SDELAKWYGP+RRI+LP+GLLDRSE+PEYLNGEV GDY
Sbjct: 34  KTVALFSKKKPAPAKSKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDY 93

Query: 354 GYDPFGLGKKPEDFAKYQAYELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGAL 533
           GYDPFGLGKKPE+FAKYQA+ELIHARWAMLGAAGFIIPEA NKYGANCGPEAVWFKTGAL
Sbjct: 94  GYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGAL 153

Query: 534 LLDGNTLNYFGKNIPINXXXXXXXXXXXXXXXXYYRITNGLDLEDKLHPGGPFDPLGLAD 713
           LLDGNTLNYFGKNIPIN                YYRITNGLD EDKLHPGGPFDPLGLA 
Sbjct: 154 LLDGNTLNYFGKNIPINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAK 213

Query: 714 DPDQAALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAAHLSDPFGNNLLTVIGGA 893
           DP+Q ALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLA HLSDPFGNNLLTVI G 
Sbjct: 214 DPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTVIAGT 273

Query: 894 AERAPTL 914
           AERAPTL
Sbjct: 274 AERAPTL 280