BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000819
         (1233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O80377.1|RSSA_DAUCA RecName: Full=40S ribosomal protein SA; A...   306   e-105
ref|XP_004144441.1| PREDICTED: 40S ribosomal protein SA-like [Cu...   285   1e-99
ref|XP_004138372.1| PREDICTED: 40S ribosomal protein SA-like [Cu...   285   1e-99
ref|XP_004165738.1| PREDICTED: 40S ribosomal protein SA-like [Cu...   284   2e-99
gb|ABB29931.1| P40-like protein [Solanum tuberosum]                   288   4e-99

>sp|O80377.1|RSSA_DAUCA RecName: Full=40S ribosomal protein SA; AltName: Full=p40
           gi|3551245|dbj|BAA32821.1| P40-like protein [Daucus
           carota]
          Length = 297

 Score =  306 bits (783), Expect(2) = e-105
 Identities = 158/224 (70%), Positives = 169/224 (75%), Gaps = 2/224 (0%)
 Frame = +2

Query: 263 QDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDH 442
           QDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDH
Sbjct: 72  QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDH 131

Query: 443 QPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWILARMVLQMRGVINQ 622
           QPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW+LARMVLQMRGVI+Q
Sbjct: 132 QPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGVISQ 191

Query: 623 GPRWEVMVDLFFYR-XXXXXXXXXXXXXXXDY-ADYSTPALGGTDQWSSQITDAQWNNEX 796
           G +WEVMVDLFFYR                DY ADY+   +GG DQW++ I DAQW  + 
Sbjct: 192 GHKWEVMVDLFFYREPEETKDQEEEDLPVGDYVADYAAAPIGGADQWNA-IPDAQWGGDV 250

Query: 797 XXXXXXXXXXXTSWTADAVPAADGWDVAPEPTMVAAPGLDITQP 928
                      T WT     A DGWD A  P +  A GLD+  P
Sbjct: 251 VQPANSAVPAGT-WTDAGPIAGDGWDAAAAPPVPGAVGLDVPAP 293



 Score =  105 bits (261), Expect(2) = e-105
 Identities = 50/54 (92%), Positives = 51/54 (94%)
 Frame = +1

Query: 1   ARELSSKEADIQKMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 162
           ARELS+ EADIQ M AAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 5   ARELSTMEADIQMMCAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 58


>ref|XP_004144441.1| PREDICTED: 40S ribosomal protein SA-like [Cucumis sativus]
          Length = 309

 Score =  285 bits (728), Expect(2) = 1e-99
 Identities = 153/241 (63%), Positives = 166/241 (68%), Gaps = 12/241 (4%)
 Frame = +2

Query: 263 QDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDH 442
           QDIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDH
Sbjct: 74  QDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDH 133

Query: 443 QPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWILARMVLQMRGVINQ 622
           QPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW+LARMVLQMRG I  
Sbjct: 134 QPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRA 193

Query: 623 GPRWEVMVDLFFYR--XXXXXXXXXXXXXXXDY--ADYSTPALGGTDQWSSQITDAQWN- 787
           G +W+VMVDLFFYR                 DY  ADY    L  +DQW+ QI+DAQW  
Sbjct: 194 GHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASDQWAGQISDAQWGA 253

Query: 788 -----NEXXXXXXXXXXXXTSWTADAVP--AADGWDVAPEPTMVAAPGLDITQPGIVAPT 946
                                WT + V   A+DGWD A  P   +A G      G  A +
Sbjct: 254 PDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDAAAPPPAPSAEG------GAPAAS 307

Query: 947 W 949
           W
Sbjct: 308 W 308



 Score =  106 bits (264), Expect(2) = 1e-99
 Identities = 50/53 (94%), Positives = 51/53 (96%)
 Frame = +1

Query: 4   RELSSKEADIQKMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 162
           R+LS KEADIQ MLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 8   RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60


>ref|XP_004138372.1| PREDICTED: 40S ribosomal protein SA-like [Cucumis sativus]
          Length = 308

 Score =  285 bits (728), Expect(2) = 1e-99
 Identities = 152/226 (67%), Positives = 163/226 (72%), Gaps = 10/226 (4%)
 Frame = +2

Query: 263 QDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDH 442
           QDIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDH
Sbjct: 75  QDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDH 134

Query: 443 QPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWILARMVLQMRGVINQ 622
           QPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW+LARMVLQMRG I  
Sbjct: 135 QPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRA 194

Query: 623 GPRWEVMVDLFFYR----XXXXXXXXXXXXXXXDYADYSTPALGGTDQWSSQITDAQWN- 787
           G +W+VMVDLFFYR                     ADYS   L  +DQW+SQI DAQW  
Sbjct: 195 GHKWDVMVDLFFYREPEEAKEPEEEEALPPADFGIADYSAAPL-TSDQWTSQIPDAQWGA 253

Query: 788 -NEXXXXXXXXXXXXTSWTADAVP-AADGWDVA---PEPTMVAAPG 910
            +               W  + V  AADGWD A   P P  V+A G
Sbjct: 254 ADAIPSPAPVVPASGAEWAPEPVALAADGWDAAAAPPPPPAVSAEG 299



 Score =  106 bits (264), Expect(2) = 1e-99
 Identities = 50/53 (94%), Positives = 51/53 (96%)
 Frame = +1

Query: 4   RELSSKEADIQKMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 162
           R+LS KEADIQ MLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 9   RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 61


>ref|XP_004165738.1| PREDICTED: 40S ribosomal protein SA-like [Cucumis sativus]
          Length = 309

 Score =  284 bits (726), Expect(2) = 2e-99
 Identities = 153/241 (63%), Positives = 166/241 (68%), Gaps = 12/241 (4%)
 Frame = +2

Query: 263 QDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDH 442
           QDIIVQSARPYGQRAVLKFAQ+TGA+AIAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDH
Sbjct: 74  QDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDH 133

Query: 443 QPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWILARMVLQMRGVINQ 622
           QPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW+LARMVLQMRG I  
Sbjct: 134 QPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRA 193

Query: 623 GPRWEVMVDLFFYR--XXXXXXXXXXXXXXXDY--ADYSTPALGGTDQWSSQITDAQWN- 787
           G +W+VMVDLFFYR                 DY  ADY    L  +DQW+ QI+DAQW  
Sbjct: 194 GHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASDQWAGQISDAQWGA 253

Query: 788 -----NEXXXXXXXXXXXXTSWTADAVP--AADGWDVAPEPTMVAAPGLDITQPGIVAPT 946
                                WT + V   A+DGWD A  P   +A G      G  A +
Sbjct: 254 PDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDPAAPPPAPSAEG------GAPAAS 307

Query: 947 W 949
           W
Sbjct: 308 W 308



 Score =  106 bits (264), Expect(2) = 2e-99
 Identities = 50/53 (94%), Positives = 51/53 (96%)
 Frame = +1

Query: 4   RELSSKEADIQKMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 162
           R+LS KEADIQ MLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 8   RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60


>gb|ABB29931.1| P40-like protein [Solanum tuberosum]
          Length = 300

 Score =  288 bits (738), Expect(2) = 4e-99
 Identities = 157/233 (67%), Positives = 168/233 (72%), Gaps = 3/233 (1%)
 Frame = +2

Query: 263 QDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQLQTSFSEPRLLILTDPRTDH 442
           QDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPGTFTNQLQTS+SEPRLLILTDPRTDH
Sbjct: 75  QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSYSEPRLLILTDPRTDH 134

Query: 443 QPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWILARMVLQMRGVINQ 622
           QPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIG LFWILARMVLQMRG I+ 
Sbjct: 135 QPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGVLFWILARMVLQMRGTISA 194

Query: 623 GPRWEVMVDLFFYR--XXXXXXXXXXXXXXXDYADYSTPALGGTDQWSSQITDAQWNNEX 796
           GP+W+VMVDLFFYR                 DYA+Y   ALGG D  SSQI DAQW  + 
Sbjct: 195 GPKWDVMVDLFFYREPEEAKDQQEEEVPAIADYAEYGGAALGG-DWTSSQIPDAQWAADG 253

Query: 797 XXXXXXXXXXXTSWTADAVPAADGWD-VAPEPTMVAAPGLDITQPGIVAPTWE 952
                        W+ +AV A  GWD  A  P  V  P  ++T     A  WE
Sbjct: 254 ATSVPVATG---GWSGEAV-AEGGWDAAAAPPAPVGVP--EVTPTPATAAGWE 300



 Score =  100 bits (250), Expect(2) = 4e-99
 Identities = 47/53 (88%), Positives = 50/53 (94%)
 Frame = +1

Query: 4   RELSSKEADIQKMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 162
           R L++KEADIQ MLAAEVHLGTKNCDFQMERYVFKRRNDGIYIIN GKTW+KL
Sbjct: 9   RTLTTKEADIQLMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINAGKTWDKL 61