BLASTX nr result

ID: Cnidium21_contig00000804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000804
         (1136 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264295.1| PREDICTED: chlorophyll a-b binding protein C...   425   e-117
emb|CAA43590.1| Type I (26 kD) CP29 polypeptide [Solanum lycoper...   413   e-113
ref|XP_004141516.1| PREDICTED: chlorophyll a-b binding protein C...   413   e-113
gb|ABG73417.1| chloroplast pigment-binding protein CP26 [Nicotia...   413   e-113
gb|ACX71300.1| chloroplast pigment-binding protein CP26 [Capsicu...   410   e-112

>ref|XP_002264295.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic
           [Vitis vinifera] gi|147770824|emb|CAN76428.1|
           hypothetical protein VITISV_023565 [Vitis vinifera]
           gi|297734735|emb|CBI16969.3| unnamed protein product
           [Vitis vinifera]
          Length = 290

 Score =  425 bits (1093), Expect = e-117
 Identities = 213/278 (76%), Positives = 220/278 (79%), Gaps = 3/278 (1%)
 Frame = +2

Query: 68  IGVSEMLGN---FXXXXXXXXXXXXXXTFKTVALFGXXXXXXXXXXXXXXXXXSDELAKW 238
           +GVSEMLGN   F              TFKTVALF                   +ELAKW
Sbjct: 13  LGVSEMLGNPLNFSGASRTAPSASSPATFKTVALFSKKKAAPAKAKPAPVSPADEELAKW 72

Query: 239 YGPDRRIFLPEGLLDRSEVPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQGYELIHARWAM 418
           YGPDRRIFLPEGLLDRSE+P YLTGEVPGDYGYDPFGLSKKPEDFAKYQ YELIHARWAM
Sbjct: 73  YGPDRRIFLPEGLLDRSEIPAYLTGEVPGDYGYDPFGLSKKPEDFAKYQAYELIHARWAM 132

Query: 419 LGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINXXXXXXXXXXXX 598
           LGAAGFIIPEAFNK+GANCGPEAVWFKTGALLLDGNTLNYFGKNIPIN            
Sbjct: 133 LGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLIFAVVAEVVLV 192

Query: 599 XXXXYYRITNGLDLEDKLHPGGPFDPLGLADDPDQAALLKVKEIKNGRLAMFAMLGFFIQ 778
               YYRI NGLDLEDKLHPGGPFDPLGLA+DPDQAALLKVKEIKNGRLAMFAMLGFFIQ
Sbjct: 193 GGAEYYRIINGLDLEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAMLGFFIQ 252

Query: 779 AYVTGEGPVENLSAHLSDPFGNNLLSVIGGAAERVPTL 892
           AYVTGEGPVENL+AHLSDPFGNNLL+VI G AER PTL
Sbjct: 253 AYVTGEGPVENLAAHLSDPFGNNLLTVIAGTAERAPTL 290


>emb|CAA43590.1| Type I (26 kD) CP29 polypeptide [Solanum lycopersicum]
          Length = 286

 Score =  413 bits (1062), Expect = e-113
 Identities = 203/252 (80%), Positives = 213/252 (84%), Gaps = 1/252 (0%)
 Frame = +2

Query: 140 TFKTVALFGXXXXXXXXXXXXXXXXXSD-ELAKWYGPDRRIFLPEGLLDRSEVPEYLTGE 316
           TFKTVALF                  +D ELAKWYGPDRRIFLPEGLLDRSE+PEYL GE
Sbjct: 35  TFKTVALFKKKAAAAPAKAKAAAVSPADDELAKWYGPDRRIFLPEGLLDRSEIPEYLNGE 94

Query: 317 VPGDYGYDPFGLSKKPEDFAKYQGYELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWF 496
           VPG+YGYDPFGLSKKPEDFAKYQ YELIHARWAMLGAAGFIIPEAFNK+GANCGPEAVWF
Sbjct: 95  VPGEYGYDPFGLSKKPEDFAKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWF 154

Query: 497 KTGALLLDGNTLNYFGKNIPINXXXXXXXXXXXXXXXXYYRITNGLDLEDKLHPGGPFDP 676
           KTGALLLDGNTLNYFGKNIPIN                YYRI NGLDLEDKLHPGGPFDP
Sbjct: 155 KTGALLLDGNTLNYFGKNIPINLILAVVAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDP 214

Query: 677 LGLADDPDQAALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLSAHLSDPFGNNLLS 856
           LGLA DPDQAA+LKVKEIKNGRLAMF+MLGFFIQAYVTG+GPVENL+AHLSDPFGNNLL+
Sbjct: 215 LGLAKDPDQAAILKVKEIKNGRLAMFSMLGFFIQAYVTGQGPVENLAAHLSDPFGNNLLT 274

Query: 857 VIGGAAERVPTL 892
           VIGGA+ERVPTL
Sbjct: 275 VIGGASERVPTL 286


>ref|XP_004141516.1| PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic-like
           [Cucumis sativus] gi|449510691|ref|XP_004163735.1|
           PREDICTED: chlorophyll a-b binding protein CP26,
           chloroplastic-like [Cucumis sativus]
          Length = 288

 Score =  413 bits (1061), Expect = e-113
 Identities = 205/276 (74%), Positives = 216/276 (78%), Gaps = 1/276 (0%)
 Frame = +2

Query: 68  IGVSEMLGN-FXXXXXXXXXXXXXXTFKTVALFGXXXXXXXXXXXXXXXXXSDELAKWYG 244
           +GVSEML N                TFKTVALFG                 +DELAKWYG
Sbjct: 13  LGVSEMLRNPLSFSSRSAPSPSTPATFKTVALFGKKPAAPAKPKPSAASPVNDELAKWYG 72

Query: 245 PDRRIFLPEGLLDRSEVPEYLTGEVPGDYGYDPFGLSKKPEDFAKYQGYELIHARWAMLG 424
           PDRRIFLP+GLLDRSE+PEYL GEVPGDYGYDPFGLSKKPEDF KYQ +ELIHARWAMLG
Sbjct: 73  PDRRIFLPDGLLDRSEIPEYLNGEVPGDYGYDPFGLSKKPEDFTKYQAFELIHARWAMLG 132

Query: 425 AAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINXXXXXXXXXXXXXX 604
           AAGFIIPEAFNK+GANCGPEAVWFKTGALLLDGNTLNYFG NIPIN              
Sbjct: 133 AAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGNNIPINLIVAVIAEVVLVGG 192

Query: 605 XXYYRITNGLDLEDKLHPGGPFDPLGLADDPDQAALLKVKEIKNGRLAMFAMLGFFIQAY 784
             YYRI NGL+ EDKLHPGGPFDPLGLADDPDQAA+LKVKEIKNGRLAMFAMLGF+ QAY
Sbjct: 193 AEYYRIINGLNFEDKLHPGGPFDPLGLADDPDQAAILKVKEIKNGRLAMFAMLGFYFQAY 252

Query: 785 VTGEGPVENLSAHLSDPFGNNLLSVIGGAAERVPTL 892
           VTGEGPVENL+ HLSDPFGNNLL+VI G AERVPTL
Sbjct: 253 VTGEGPVENLAKHLSDPFGNNLLTVISGNAERVPTL 288


>gb|ABG73417.1| chloroplast pigment-binding protein CP26 [Nicotiana tabacum]
          Length = 285

 Score =  413 bits (1061), Expect = e-113
 Identities = 200/251 (79%), Positives = 210/251 (83%)
 Frame = +2

Query: 140 TFKTVALFGXXXXXXXXXXXXXXXXXSDELAKWYGPDRRIFLPEGLLDRSEVPEYLTGEV 319
           TFKTVALF                   +ELAKWYGPDRRIFLP+GLLDRSE+PEYL GEV
Sbjct: 35  TFKTVALFKKKAAAAPAKKAVAIAPADEELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEV 94

Query: 320 PGDYGYDPFGLSKKPEDFAKYQGYELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFK 499
           PGDYGYDPFGLSKKPEDFAKYQ YELIHARWAMLGAAGF+IPEAFNK+GA+CGPEAVWFK
Sbjct: 95  PGDYGYDPFGLSKKPEDFAKYQAYELIHARWAMLGAAGFVIPEAFNKFGADCGPEAVWFK 154

Query: 500 TGALLLDGNTLNYFGKNIPINXXXXXXXXXXXXXXXXYYRITNGLDLEDKLHPGGPFDPL 679
           TGALLLDGNTLNYFGKNIPIN                YYRITNGLDLEDKLHPGGPFDPL
Sbjct: 155 TGALLLDGNTLNYFGKNIPINLVVAVVAEVVLLGGAEYYRITNGLDLEDKLHPGGPFDPL 214

Query: 680 GLADDPDQAALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLSAHLSDPFGNNLLSV 859
           GLA DPDQAA+LKVKEIKNGRLAMFAMLGFFIQAYVTG+GPVENL+AHLSDPFGNNLL+V
Sbjct: 215 GLAKDPDQAAILKVKEIKNGRLAMFAMLGFFIQAYVTGKGPVENLAAHLSDPFGNNLLTV 274

Query: 860 IGGAAERVPTL 892
           I G AER PTL
Sbjct: 275 IAGTAERAPTL 285


>gb|ACX71300.1| chloroplast pigment-binding protein CP26 [Capsicum annuum]
          Length = 287

 Score =  410 bits (1053), Expect = e-112
 Identities = 202/252 (80%), Positives = 210/252 (83%), Gaps = 1/252 (0%)
 Frame = +2

Query: 140 TFKTVALFGXXXXXXXXXXXXXXXXX-SDELAKWYGPDRRIFLPEGLLDRSEVPEYLTGE 316
           TFKTVALF                    DELAKWYGPDRRIFLPEGLLD+SE+PEYL GE
Sbjct: 36  TFKTVALFKKKSAAAPVKAKAAAASPLDDELAKWYGPDRRIFLPEGLLDKSEIPEYLNGE 95

Query: 317 VPGDYGYDPFGLSKKPEDFAKYQGYELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWF 496
           VPGDYGYDPFGLSKKPEDFAKYQ YELIHARWAMLGAAGFIIPEAFNK+GANCGPEAVWF
Sbjct: 96  VPGDYGYDPFGLSKKPEDFAKYQAYELIHARWAMLGAAGFIIPEAFNKFGANCGPEAVWF 155

Query: 497 KTGALLLDGNTLNYFGKNIPINXXXXXXXXXXXXXXXXYYRITNGLDLEDKLHPGGPFDP 676
           KTGALLLDGNTL YFGKNIPIN                YYRI NGLDLEDKLHPGGPFDP
Sbjct: 156 KTGALLLDGNTLYYFGKNIPINLVLAVIAEVVLVGGAEYYRIINGLDLEDKLHPGGPFDP 215

Query: 677 LGLADDPDQAALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLSAHLSDPFGNNLLS 856
           LGLA DPDQAA+LKVKEIKNGRLAMF+MLGFFIQAYVTG+GPVENL+AHLSDPFGNNLL+
Sbjct: 216 LGLAKDPDQAAILKVKEIKNGRLAMFSMLGFFIQAYVTGQGPVENLAAHLSDPFGNNLLT 275

Query: 857 VIGGAAERVPTL 892
           VIGGA ERVPTL
Sbjct: 276 VIGGATERVPTL 287


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