BLASTX nr result

ID: Cnidium21_contig00000780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000780
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P42552.1|S1FA_SPIOL RecName: Full=DNA-binding protein S1FA gi...    61   8e-08
ref|XP_004143239.1| PREDICTED: DNA-binding protein S1FA1-like [C...    61   1e-07
ref|XP_003521381.1| PREDICTED: DNA-binding protein S1FA2 [Glycin...    60   2e-07
ref|XP_004137812.1| PREDICTED: DNA-binding protein S1FA2-like [C...    59   3e-07
ref|XP_002525167.1| DNA-binding protein S1FA, putative [Ricinus ...    59   3e-07

>sp|P42552.1|S1FA_SPIOL RecName: Full=DNA-binding protein S1FA gi|498705|emb|CAA56077.1|
           s1Fa [Spinacia oleracea]
          Length = 70

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 37/92 (40%), Positives = 45/92 (48%)
 Frame = -2

Query: 342 IMDSEAQGFNPGLIVLIXXXXXXXXXXXXXXXXXXXXXXXXXVGGLVSTFLVGNYCLYVY 163
           + + EA+G NPGLIVL+                         +GGL+ TFLVGN+ LY Y
Sbjct: 3   VNEVEAKGLNPGLIVLLV------------------------IGGLLLTFLVGNFILYTY 38

Query: 162 AQKNLPARXXXXXXXXXXXXXXXKQGVAPPGE 67
           AQKNLP +               KQGVAPPGE
Sbjct: 39  AQKNLPPKKKKPISKKKMKRERLKQGVAPPGE 70


>ref|XP_004143239.1| PREDICTED: DNA-binding protein S1FA1-like [Cucumis sativus]
           gi|449482509|ref|XP_004156305.1| PREDICTED: DNA-binding
           protein S1FA1-like [Cucumis sativus]
          Length = 89

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 38/92 (41%), Positives = 44/92 (47%)
 Frame = -2

Query: 342 IMDSEAQGFNPGLIVLIXXXXXXXXXXXXXXXXXXXXXXXXXVGGLVSTFLVGNYCLYVY 163
           I D EA+GFNPGLIVL+                         VGGL+  FLVGNY LY+Y
Sbjct: 22  IRDGEARGFNPGLIVLLV------------------------VGGLLFAFLVGNYALYMY 57

Query: 162 AQKNLPARXXXXXXXXXXXXXXXKQGVAPPGE 67
           AQK LP +               KQGV+ PGE
Sbjct: 58  AQKTLPPKKKKPVSKKKMKRERLKQGVSAPGE 89


>ref|XP_003521381.1| PREDICTED: DNA-binding protein S1FA2 [Glycine max]
           gi|255626901|gb|ACU13795.1| unknown [Glycine max]
          Length = 89

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 38/92 (41%), Positives = 44/92 (47%)
 Frame = -2

Query: 342 IMDSEAQGFNPGLIVLIXXXXXXXXXXXXXXXXXXXXXXXXXVGGLVSTFLVGNYCLYVY 163
           I DS ++GFNPGLIVL+                         VGGL+ TFL+GNY LY Y
Sbjct: 22  IKDSGSKGFNPGLIVLLV------------------------VGGLLLTFLIGNYVLYSY 57

Query: 162 AQKNLPARXXXXXXXXXXXXXXXKQGVAPPGE 67
           AQK LP R               KQGV+ PGE
Sbjct: 58  AQKTLPPRKKKPVSKKKMKKERLKQGVSAPGE 89


>ref|XP_004137812.1| PREDICTED: DNA-binding protein S1FA2-like [Cucumis sativus]
           gi|449516221|ref|XP_004165146.1| PREDICTED: DNA-binding
           protein S1FA2-like [Cucumis sativus]
          Length = 78

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 38/92 (41%), Positives = 44/92 (47%)
 Frame = -2

Query: 342 IMDSEAQGFNPGLIVLIXXXXXXXXXXXXXXXXXXXXXXXXXVGGLVSTFLVGNYCLYVY 163
           I D EA+GFNP LIVL+                         VGGL+  FLVGNY LY+Y
Sbjct: 11  INDIEAKGFNPALIVLLL------------------------VGGLLLIFLVGNYALYLY 46

Query: 162 AQKNLPARXXXXXXXXXXXXXXXKQGVAPPGE 67
           AQKNLP +               KQGV+ PGE
Sbjct: 47  AQKNLPPKKKKPVSKKKMKRERLKQGVSAPGE 78


>ref|XP_002525167.1| DNA-binding protein S1FA, putative [Ricinus communis]
           gi|223535464|gb|EEF37133.1| DNA-binding protein S1FA,
           putative [Ricinus communis]
          Length = 89

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 34/92 (36%), Positives = 44/92 (47%)
 Frame = -2

Query: 342 IMDSEAQGFNPGLIVLIXXXXXXXXXXXXXXXXXXXXXXXXXVGGLVSTFLVGNYCLYVY 163
           + D E +GFNPGLIVL+                         +GG+V TFL+GNY LY+Y
Sbjct: 22  VKDVETKGFNPGLIVLLV------------------------IGGIVLTFLIGNYVLYMY 57

Query: 162 AQKNLPARXXXXXXXXXXXXXXXKQGVAPPGE 67
           AQK LP +               +QGV+ PGE
Sbjct: 58  AQKTLPPKKKKPVSKKKMKRERLRQGVSAPGE 89


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