BLASTX nr result

ID: Cnidium21_contig00000760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000760
         (1356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001243291.1| malate dehydrogenase, cytoplasmic-like [Glyc...   514   e-143
ref|XP_002332745.1| predicted protein [Populus trichocarpa] gi|2...   510   e-142
ref|NP_001236661.1| cytosolic malate dehydrogenase [Glycine max]...   507   e-141
ref|XP_002467079.1| hypothetical protein SORBIDRAFT_01g019280 [S...   506   e-141
gb|ABC01890.1| malate dehydrogenase-like protein [Solanum tubero...   504   e-140

>ref|NP_001243291.1| malate dehydrogenase, cytoplasmic-like [Glycine max]
            gi|366985127|gb|AEX09388.1| malate dehydrogenase [Glycine
            max]
          Length = 328

 Score =  514 bits (1325), Expect = e-143
 Identities = 269/332 (81%), Positives = 276/332 (83%)
 Frame = +1

Query: 163  MAKQPARVLVTGAAGQIGYALVPMIARGVMLGLDQPVILHMLDIPPAAEALNGVKMELID 342
            MAK P RVLVTGAAGQIGYALVPMIARGVMLG DQPVILHMLDIPPAAE+LNGVKMEL+D
Sbjct: 1    MAKDPVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVD 60

Query: 343  AAFPLLKGVVATTDVVEACTGVNYAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH 522
            AAFPLLKGVVATTDVVEACTGVN AVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH
Sbjct: 61   AAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH 120

Query: 523  AAANCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQISERLSVQVSDVK 702
            AAANCKVLVVANPANTNALILKEFAPSIPEKNI+CLTRLDHNRALGQISERL++QVSDVK
Sbjct: 121  AAANCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLNIQVSDVK 180

Query: 703  NAIIWGNHSSTQYPDVNHATVGGKPVRELVADDEWLNGEFIKTVQQRGAAIIKARKXXXX 882
            N IIWGNHSSTQYPDVNHATVG KPVREL+ADD WLNGEFI TVQQRGAAIIKARK    
Sbjct: 181  NVIIWGNHSSTQYPDVNHATVGEKPVRELIADDAWLNGEFITTVQQRGAAIIKARKLSSA 240

Query: 883  XXXXXXXCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLIYSFPVTCANGEWKIV 1062
                   C                                  GLIYSFPVTCANGEW IV
Sbjct: 241  LSAASAAC----DHIRDWVLGTPQGTWVSMGVYSDGSYNVPAGLIYSFPVTCANGEWTIV 296

Query: 1063 QGLSIDEFSRKKLDLTAEELSEEKTLAYSCLS 1158
            QGL IDEFSRKKLDLTAEELSEEK LAYSCL+
Sbjct: 297  QGLPIDEFSRKKLDLTAEELSEEKALAYSCLN 328


>ref|XP_002332745.1| predicted protein [Populus trichocarpa] gi|222833073|gb|EEE71550.1|
            predicted protein [Populus trichocarpa]
          Length = 332

 Score =  510 bits (1313), Expect = e-142
 Identities = 271/336 (80%), Positives = 277/336 (82%), Gaps = 4/336 (1%)
 Frame = +1

Query: 163  MAKQPARVLVTGAAGQIGYALVPMIARGVMLGLDQPVILHMLDIPPAAEALNGVKMELID 342
            MAK+PARVLVTGAAGQIGYALVPMIARGVMLG DQPVILHMLDIPPAAEALNGVKMEL+D
Sbjct: 1    MAKEPARVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAEALNGVKMELVD 60

Query: 343  AAFPLLKGVVATTDVVEACTGVNYAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH 522
            AAFPLLKGVVATTDVVEACTGVN AVMVGGFPRKEGMERKDVM+KNVSIYKSQASALEKH
Sbjct: 61   AAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKH 120

Query: 523  AAANCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQISERLSVQVSDVK 702
            AAANCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQISERL+VQVSDVK
Sbjct: 121  AAANCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQISERLNVQVSDVK 180

Query: 703  NAIIWGNHSSTQYPDVNHATV----GGKPVRELVADDEWLNGEFIKTVQQRGAAIIKARK 870
            N IIWGNHSSTQYPDVNHATV    G KPVRELV DD WLN EFI TVQQRGAAIIKARK
Sbjct: 181  NVIIWGNHSSTQYPDVNHATVKTPAGEKPVRELVKDDAWLNAEFITTVQQRGAAIIKARK 240

Query: 871  XXXXXXXXXXXCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLIYSFPVTCANGE 1050
                       C                                  GLIYSFPVTC NGE
Sbjct: 241  LSSALSAASSAC----DHIHDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVTCQNGE 296

Query: 1051 WKIVQGLSIDEFSRKKLDLTAEELSEEKTLAYSCLS 1158
            WKIVQGLSIDEFSRKKLDLTA+ELSEEK LAYSCL+
Sbjct: 297  WKIVQGLSIDEFSRKKLDLTADELSEEKALAYSCLT 332


>ref|NP_001236661.1| cytosolic malate dehydrogenase [Glycine max]
            gi|42521311|gb|AAS18241.1| cytosolic malate dehydrogenase
            [Glycine max]
          Length = 332

 Score =  507 bits (1306), Expect = e-141
 Identities = 269/336 (80%), Positives = 276/336 (82%), Gaps = 4/336 (1%)
 Frame = +1

Query: 163  MAKQPARVLVTGAAGQIGYALVPMIARGVMLGLDQPVILHMLDIPPAAEALNGVKMELID 342
            MAK P RVLVTGAAGQIGYALVPMIARGVMLG DQPVILHMLDIPPAAE+LNGVKMEL+D
Sbjct: 1    MAKDPVRVLVTGAAGQIGYALVPMIARGVMLGPDQPVILHMLDIPPAAESLNGVKMELVD 60

Query: 343  AAFPLLKGVVATTDVVEACTGVNYAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH 522
            AAFPLLKGVVATTDVVEACTGVN AVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH
Sbjct: 61   AAFPLLKGVVATTDVVEACTGVNIAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH 120

Query: 523  AAANCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQISERLSVQVSDVK 702
            AAANCKVLVVANPANTNALILKEFAPSIPEKNI+CLTRLDHNRALGQISERL+VQVSDVK
Sbjct: 121  AAANCKVLVVANPANTNALILKEFAPSIPEKNISCLTRLDHNRALGQISERLTVQVSDVK 180

Query: 703  NAIIWGNHSSTQYPDVNHATV----GGKPVRELVADDEWLNGEFIKTVQQRGAAIIKARK 870
            N IIWGNHSSTQYPDVNHATV    G KPVREL+ADD WLNGEFI TVQQRGAAIIKARK
Sbjct: 181  NVIIWGNHSSTQYPDVNHATVATSAGEKPVRELIADDAWLNGEFITTVQQRGAAIIKARK 240

Query: 871  XXXXXXXXXXXCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLIYSFPVTCANGE 1050
                       C                                  GLIYSFPVTCANGE
Sbjct: 241  LSSALSAASAAC----DHIRDWVLGTPQGTWVSMGVYSDGSYNVPAGLIYSFPVTCANGE 296

Query: 1051 WKIVQGLSIDEFSRKKLDLTAEELSEEKTLAYSCLS 1158
            W IVQGLSIDEFSRKKLDLTA+EL EEK LAYSCL+
Sbjct: 297  WAIVQGLSIDEFSRKKLDLTAKELFEEKALAYSCLN 332


>ref|XP_002467079.1| hypothetical protein SORBIDRAFT_01g019280 [Sorghum bicolor]
            gi|241920933|gb|EER94077.1| hypothetical protein
            SORBIDRAFT_01g019280 [Sorghum bicolor]
          Length = 332

 Score =  506 bits (1303), Expect = e-141
 Identities = 268/335 (80%), Positives = 274/335 (81%), Gaps = 4/335 (1%)
 Frame = +1

Query: 163  MAKQPARVLVTGAAGQIGYALVPMIARGVMLGLDQPVILHMLDIPPAAEALNGVKMELID 342
            MAK P RVLVTGAAGQIGYALVPMIARGVMLG DQPVILHMLDIPPAAEALNGVKMEL+D
Sbjct: 1    MAKDPMRVLVTGAAGQIGYALVPMIARGVMLGADQPVILHMLDIPPAAEALNGVKMELVD 60

Query: 343  AAFPLLKGVVATTDVVEACTGVNYAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH 522
            AAFPLLKGVVATTDVVEACTGVN AVMVGGFPRKEGMERKDVM+KNVSIYK+QASALE H
Sbjct: 61   AAFPLLKGVVATTDVVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKAQASALEAH 120

Query: 523  AAANCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQISERLSVQVSDVK 702
            AA NCKVLVVANPANTNALILKEFAPSIPEKN+TCLTRLDHNRALGQISERLSVQVSDVK
Sbjct: 121  AAPNCKVLVVANPANTNALILKEFAPSIPEKNVTCLTRLDHNRALGQISERLSVQVSDVK 180

Query: 703  NAIIWGNHSSTQYPDVNHATV----GGKPVRELVADDEWLNGEFIKTVQQRGAAIIKARK 870
            N IIWGNHSSTQYPDVNHATV    G KPVRELVADDEWLNGEFI TVQQRGAAIIKARK
Sbjct: 181  NVIIWGNHSSTQYPDVNHATVKTSTGEKPVRELVADDEWLNGEFITTVQQRGAAIIKARK 240

Query: 871  XXXXXXXXXXXCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLIYSFPVTCANGE 1050
                       C                                  GLIYSFPVTC+ GE
Sbjct: 241  LSSALSAASSAC----DHIRDWVLGTPEGTFVSMGVYSDGSYGVPSGLIYSFPVTCSGGE 296

Query: 1051 WKIVQGLSIDEFSRKKLDLTAEELSEEKTLAYSCL 1155
            WKIVQGL IDEFSRKKLD TA+ELSEEKTLAYSCL
Sbjct: 297  WKIVQGLPIDEFSRKKLDATAQELSEEKTLAYSCL 331


>gb|ABC01890.1| malate dehydrogenase-like protein [Solanum tuberosum]
          Length = 332

 Score =  504 bits (1298), Expect = e-140
 Identities = 268/336 (79%), Positives = 272/336 (80%), Gaps = 4/336 (1%)
 Frame = +1

Query: 163  MAKQPARVLVTGAAGQIGYALVPMIARGVMLGLDQPVILHMLDIPPAAEALNGVKMELID 342
            MAK P RVLVTGAAGQIGYALVPMIARGVMLG DQPVILHMLDIPPAAEALNGVKMEL+D
Sbjct: 1    MAKDPVRVLVTGAAGQIGYALVPMIARGVMLGADQPVILHMLDIPPAAEALNGVKMELVD 60

Query: 343  AAFPLLKGVVATTDVVEACTGVNYAVMVGGFPRKEGMERKDVMTKNVSIYKSQASALEKH 522
            AAFPLLKGVVATTD VEACTGVN AVMVGGFPRKEGMERKDVM+KNVSIYKSQASALEKH
Sbjct: 61   AAFPLLKGVVATTDAVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKH 120

Query: 523  AAANCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQISERLSVQVSDVK 702
            AA NCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQISERLSVQVSDVK
Sbjct: 121  AAPNCKVLVVANPANTNALILKEFAPSIPEKNITCLTRLDHNRALGQISERLSVQVSDVK 180

Query: 703  NAIIWGNHSSTQYPDVNHATV----GGKPVRELVADDEWLNGEFIKTVQQRGAAIIKARK 870
            N IIWGNHSS+QYPDVNHATV    G KPVRELVADD WLNGEFI TVQQRGAAIIKARK
Sbjct: 181  NVIIWGNHSSSQYPDVNHATVTTPAGDKPVRELVADDAWLNGEFISTVQQRGAAIIKARK 240

Query: 871  XXXXXXXXXXXCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLIYSFPVTCANGE 1050
                       C                                  GLIYSFPVTC NGE
Sbjct: 241  LSSALSAASSAC----DHIRDWVLGTPEGTFVSMGVYSDGSYNVPAGLIYSFPVTCKNGE 296

Query: 1051 WKIVQGLSIDEFSRKKLDLTAEELSEEKTLAYSCLS 1158
            W IVQ L IDEFSRKKLDLTAEELSEEK LAYSCL+
Sbjct: 297  WSIVQDLPIDEFSRKKLDLTAEELSEEKALAYSCLT 332


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