BLASTX nr result
ID: Cnidium21_contig00000756
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00000756 (326 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002510680.1| hedgehog receptor, putative [Ricinus communi... 73 3e-11 ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vit... 71 8e-11 emb|CBI40718.3| unnamed protein product [Vitis vinifera] 71 8e-11 emb|CAN75892.1| hypothetical protein VITISV_009389 [Vitis vinifera] 71 8e-11 ref|XP_002307793.1| cholesterol transport protein [Populus trich... 70 2e-10 >ref|XP_002510680.1| hedgehog receptor, putative [Ricinus communis] gi|223551381|gb|EEF52867.1| hedgehog receptor, putative [Ricinus communis] Length = 1235 Score = 72.8 bits (177), Expect = 3e-11 Identities = 41/78 (52%), Positives = 54/78 (69%), Gaps = 7/78 (8%) Frame = -3 Query: 213 SIGFTFFER*FCFY-------SLSVLSCYLNSICHLCRYWSSAIIILVLTMIVVDLMGVM 55 S+ + FFE+ + ++++ + +L + C WSSAII+LVL MIV+DLMGVM Sbjct: 1046 SVFYMFFEQYLDIWRTALINLAIAIGAVFLVCLVITCSLWSSAIILLVLAMIVIDLMGVM 1105 Query: 54 ATLNIQLNAVSVVNLVMA 1 A LNIQLNAVSVVNLVMA Sbjct: 1106 AILNIQLNAVSVVNLVMA 1123 >ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vitis vinifera] Length = 1309 Score = 71.2 bits (173), Expect = 8e-11 Identities = 40/78 (51%), Positives = 54/78 (69%), Gaps = 7/78 (8%) Frame = -3 Query: 213 SIGFTFFER*FCFY-------SLSVLSCYLNSICHLCRYWSSAIIILVLTMIVVDLMGVM 55 S+ + FFE+ + ++++ + ++ + C WSSAII+LVL MIVVDLMGVM Sbjct: 1120 SVFYMFFEQYLDIWRTALINLAIAIGAVFIVCLVITCSLWSSAIILLVLAMIVVDLMGVM 1179 Query: 54 ATLNIQLNAVSVVNLVMA 1 A LNIQLNA+SVVNLVMA Sbjct: 1180 AILNIQLNALSVVNLVMA 1197 >emb|CBI40718.3| unnamed protein product [Vitis vinifera] Length = 1242 Score = 71.2 bits (173), Expect = 8e-11 Identities = 40/78 (51%), Positives = 54/78 (69%), Gaps = 7/78 (8%) Frame = -3 Query: 213 SIGFTFFER*FCFY-------SLSVLSCYLNSICHLCRYWSSAIIILVLTMIVVDLMGVM 55 S+ + FFE+ + ++++ + ++ + C WSSAII+LVL MIVVDLMGVM Sbjct: 1053 SVFYMFFEQYLDIWRTALINLAIAIGAVFIVCLVITCSLWSSAIILLVLAMIVVDLMGVM 1112 Query: 54 ATLNIQLNAVSVVNLVMA 1 A LNIQLNA+SVVNLVMA Sbjct: 1113 AILNIQLNALSVVNLVMA 1130 >emb|CAN75892.1| hypothetical protein VITISV_009389 [Vitis vinifera] Length = 1050 Score = 71.2 bits (173), Expect = 8e-11 Identities = 40/78 (51%), Positives = 54/78 (69%), Gaps = 7/78 (8%) Frame = -3 Query: 213 SIGFTFFER*FCFY-------SLSVLSCYLNSICHLCRYWSSAIIILVLTMIVVDLMGVM 55 S+ + FFE+ + ++++ + ++ + C WSSAII+LVL MIVVDLMGVM Sbjct: 888 SVFYMFFEQYLDIWRTALINLAIAIGAVFIVCLVITCSLWSSAIILLVLAMIVVDLMGVM 947 Query: 54 ATLNIQLNAVSVVNLVMA 1 A LNIQLNA+SVVNLVMA Sbjct: 948 AILNIQLNALSVVNLVMA 965 >ref|XP_002307793.1| cholesterol transport protein [Populus trichocarpa] gi|222857242|gb|EEE94789.1| cholesterol transport protein [Populus trichocarpa] Length = 1274 Score = 69.7 bits (169), Expect = 2e-10 Identities = 39/78 (50%), Positives = 54/78 (69%), Gaps = 7/78 (8%) Frame = -3 Query: 213 SIGFTFFER*FCFY-------SLSVLSCYLNSICHLCRYWSSAIIILVLTMIVVDLMGVM 55 S+ + FFE+ + ++++ + ++ + C W+SAII+LVL MIVVDLMGVM Sbjct: 1085 SVFYMFFEQYLDIWRTALINLAIAIGAVFVVCLVITCSLWNSAIILLVLAMIVVDLMGVM 1144 Query: 54 ATLNIQLNAVSVVNLVMA 1 A LNIQLNAVSVVNLVM+ Sbjct: 1145 AILNIQLNAVSVVNLVMS 1162