BLASTX nr result

ID: Cnidium21_contig00000756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000756
         (326 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510680.1| hedgehog receptor, putative [Ricinus communi...    73   3e-11
ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vit...    71   8e-11
emb|CBI40718.3| unnamed protein product [Vitis vinifera]               71   8e-11
emb|CAN75892.1| hypothetical protein VITISV_009389 [Vitis vinifera]    71   8e-11
ref|XP_002307793.1| cholesterol transport protein [Populus trich...    70   2e-10

>ref|XP_002510680.1| hedgehog receptor, putative [Ricinus communis]
            gi|223551381|gb|EEF52867.1| hedgehog receptor, putative
            [Ricinus communis]
          Length = 1235

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 41/78 (52%), Positives = 54/78 (69%), Gaps = 7/78 (8%)
 Frame = -3

Query: 213  SIGFTFFER*FCFY-------SLSVLSCYLNSICHLCRYWSSAIIILVLTMIVVDLMGVM 55
            S+ + FFE+    +       ++++ + +L  +   C  WSSAII+LVL MIV+DLMGVM
Sbjct: 1046 SVFYMFFEQYLDIWRTALINLAIAIGAVFLVCLVITCSLWSSAIILLVLAMIVIDLMGVM 1105

Query: 54   ATLNIQLNAVSVVNLVMA 1
            A LNIQLNAVSVVNLVMA
Sbjct: 1106 AILNIQLNAVSVVNLVMA 1123


>ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vitis vinifera]
          Length = 1309

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 40/78 (51%), Positives = 54/78 (69%), Gaps = 7/78 (8%)
 Frame = -3

Query: 213  SIGFTFFER*FCFY-------SLSVLSCYLNSICHLCRYWSSAIIILVLTMIVVDLMGVM 55
            S+ + FFE+    +       ++++ + ++  +   C  WSSAII+LVL MIVVDLMGVM
Sbjct: 1120 SVFYMFFEQYLDIWRTALINLAIAIGAVFIVCLVITCSLWSSAIILLVLAMIVVDLMGVM 1179

Query: 54   ATLNIQLNAVSVVNLVMA 1
            A LNIQLNA+SVVNLVMA
Sbjct: 1180 AILNIQLNALSVVNLVMA 1197


>emb|CBI40718.3| unnamed protein product [Vitis vinifera]
          Length = 1242

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 40/78 (51%), Positives = 54/78 (69%), Gaps = 7/78 (8%)
 Frame = -3

Query: 213  SIGFTFFER*FCFY-------SLSVLSCYLNSICHLCRYWSSAIIILVLTMIVVDLMGVM 55
            S+ + FFE+    +       ++++ + ++  +   C  WSSAII+LVL MIVVDLMGVM
Sbjct: 1053 SVFYMFFEQYLDIWRTALINLAIAIGAVFIVCLVITCSLWSSAIILLVLAMIVVDLMGVM 1112

Query: 54   ATLNIQLNAVSVVNLVMA 1
            A LNIQLNA+SVVNLVMA
Sbjct: 1113 AILNIQLNALSVVNLVMA 1130


>emb|CAN75892.1| hypothetical protein VITISV_009389 [Vitis vinifera]
          Length = 1050

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 40/78 (51%), Positives = 54/78 (69%), Gaps = 7/78 (8%)
 Frame = -3

Query: 213  SIGFTFFER*FCFY-------SLSVLSCYLNSICHLCRYWSSAIIILVLTMIVVDLMGVM 55
            S+ + FFE+    +       ++++ + ++  +   C  WSSAII+LVL MIVVDLMGVM
Sbjct: 888  SVFYMFFEQYLDIWRTALINLAIAIGAVFIVCLVITCSLWSSAIILLVLAMIVVDLMGVM 947

Query: 54   ATLNIQLNAVSVVNLVMA 1
            A LNIQLNA+SVVNLVMA
Sbjct: 948  AILNIQLNALSVVNLVMA 965


>ref|XP_002307793.1| cholesterol transport protein [Populus trichocarpa]
            gi|222857242|gb|EEE94789.1| cholesterol transport protein
            [Populus trichocarpa]
          Length = 1274

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 39/78 (50%), Positives = 54/78 (69%), Gaps = 7/78 (8%)
 Frame = -3

Query: 213  SIGFTFFER*FCFY-------SLSVLSCYLNSICHLCRYWSSAIIILVLTMIVVDLMGVM 55
            S+ + FFE+    +       ++++ + ++  +   C  W+SAII+LVL MIVVDLMGVM
Sbjct: 1085 SVFYMFFEQYLDIWRTALINLAIAIGAVFVVCLVITCSLWNSAIILLVLAMIVVDLMGVM 1144

Query: 54   ATLNIQLNAVSVVNLVMA 1
            A LNIQLNAVSVVNLVM+
Sbjct: 1145 AILNIQLNAVSVVNLVMS 1162


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