BLASTX nr result

ID: Cnidium21_contig00000718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000718
         (909 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274463.1| PREDICTED: AP-1 complex subunit mu-1 [Vitis ...   315   7e-84
gb|AEL99016.1| AP-1 complex subunit mu, partial [Silene latifoli...   315   1e-83
ref|XP_003613166.1| AP-1 complex subunit mu [Medicago truncatula...   314   2e-83
ref|XP_003531990.1| PREDICTED: AP-1 complex subunit mu-1-I-like ...   313   3e-83
ref|XP_003552037.1| PREDICTED: AP-1 complex subunit mu-1-I-like ...   313   4e-83

>ref|XP_002274463.1| PREDICTED: AP-1 complex subunit mu-1 [Vitis vinifera]
           gi|296083422|emb|CBI23375.3| unnamed protein product
           [Vitis vinifera]
          Length = 428

 Score =  315 bits (808), Expect = 7e-84
 Identities = 156/167 (93%), Positives = 163/167 (97%)
 Frame = +1

Query: 1   DGSFDLMTYRLSTQVKPLIWVEAQVERHSRSRMEIMVKARSQFKERSTATNVEIELPVPS 180
           DGSFDLMTYRLSTQVKPLIWVEAQVERHSRSR+EIMVKARSQFKERSTATNVEIELPVPS
Sbjct: 262 DGSFDLMTYRLSTQVKPLIWVEAQVERHSRSRIEIMVKARSQFKERSTATNVEIELPVPS 321

Query: 181 DAINPNLRTSMGSASYAPEKDAVLWKIKSFPGGKEYMLRAEFNLPSITDEEAAPDRKAPI 360
           DA NPN+RTSMGSA+YAPE DA+LWKIKSFPGGKEYMLRAEF+LPSIT EE AP+RKAPI
Sbjct: 322 DATNPNIRTSMGSAAYAPENDALLWKIKSFPGGKEYMLRAEFSLPSITAEEGAPERKAPI 381

Query: 361 RVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRLM 501
           RVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRL+
Sbjct: 382 RVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRLI 428


>gb|AEL99016.1| AP-1 complex subunit mu, partial [Silene latifolia]
           gi|343172627|gb|AEL99017.1| AP-1 complex subunit mu,
           partial [Silene latifolia]
          Length = 428

 Score =  315 bits (806), Expect = 1e-83
 Identities = 154/167 (92%), Positives = 163/167 (97%)
 Frame = +1

Query: 1   DGSFDLMTYRLSTQVKPLIWVEAQVERHSRSRMEIMVKARSQFKERSTATNVEIELPVPS 180
           DG+FDLMTYRLSTQVKPLIWVEAQ+ERHSRSR+EIMVKARSQFKERSTATNVEIELPVPS
Sbjct: 262 DGAFDLMTYRLSTQVKPLIWVEAQIERHSRSRIEIMVKARSQFKERSTATNVEIELPVPS 321

Query: 181 DAINPNLRTSMGSASYAPEKDAVLWKIKSFPGGKEYMLRAEFNLPSITDEEAAPDRKAPI 360
           DA NPN+RTSMGSASYAPEKDA++WKIKSFPGGKEYMLRAEF+LPSI  +EA P+RKAPI
Sbjct: 322 DATNPNIRTSMGSASYAPEKDALVWKIKSFPGGKEYMLRAEFSLPSIQSDEATPERKAPI 381

Query: 361 RVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRLM 501
           RVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRLM
Sbjct: 382 RVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRLM 428


>ref|XP_003613166.1| AP-1 complex subunit mu [Medicago truncatula]
           gi|355514501|gb|AES96124.1| AP-1 complex subunit mu
           [Medicago truncatula] gi|388506096|gb|AFK41114.1|
           unknown [Medicago truncatula]
          Length = 428

 Score =  314 bits (804), Expect = 2e-83
 Identities = 154/167 (92%), Positives = 163/167 (97%)
 Frame = +1

Query: 1   DGSFDLMTYRLSTQVKPLIWVEAQVERHSRSRMEIMVKARSQFKERSTATNVEIELPVPS 180
           DGSFDLMTYRLSTQVKPLIWVEA VE+HS+SR+EIMVKARSQFKERSTATNVEIELPVP 
Sbjct: 262 DGSFDLMTYRLSTQVKPLIWVEANVEKHSKSRIEIMVKARSQFKERSTATNVEIELPVPV 321

Query: 181 DAINPNLRTSMGSASYAPEKDAVLWKIKSFPGGKEYMLRAEFNLPSITDEEAAPDRKAPI 360
           DA NPN+RTSMGSASYAPEKDA++WKI+SFPGGKEYMLRAEF LPSITDEEAAP+RKAPI
Sbjct: 322 DATNPNVRTSMGSASYAPEKDALIWKIRSFPGGKEYMLRAEFRLPSITDEEAAPERKAPI 381

Query: 361 RVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRLM 501
           RVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRL+
Sbjct: 382 RVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRLI 428


>ref|XP_003531990.1| PREDICTED: AP-1 complex subunit mu-1-I-like [Glycine max]
          Length = 428

 Score =  313 bits (803), Expect = 3e-83
 Identities = 152/167 (91%), Positives = 164/167 (98%)
 Frame = +1

Query: 1   DGSFDLMTYRLSTQVKPLIWVEAQVERHSRSRMEIMVKARSQFKERSTATNVEIELPVPS 180
           DGSFDLMTYRLSTQVKPL+WVEAQVE+HS+SR+EIMVKARSQFKERSTATNVEIELPVP+
Sbjct: 262 DGSFDLMTYRLSTQVKPLVWVEAQVEKHSKSRIEIMVKARSQFKERSTATNVEIELPVPA 321

Query: 181 DAINPNLRTSMGSASYAPEKDAVLWKIKSFPGGKEYMLRAEFNLPSITDEEAAPDRKAPI 360
           DA NPN+RTSMGSASYAPEKDA++WKI+SFPGGKEYMLRAEF+LPSI DEEA P+RKAPI
Sbjct: 322 DATNPNVRTSMGSASYAPEKDALIWKIRSFPGGKEYMLRAEFHLPSIVDEEATPERKAPI 381

Query: 361 RVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRLM 501
           RVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRL+
Sbjct: 382 RVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRLI 428


>ref|XP_003552037.1| PREDICTED: AP-1 complex subunit mu-1-I-like [Glycine max]
          Length = 428

 Score =  313 bits (802), Expect = 4e-83
 Identities = 152/167 (91%), Positives = 163/167 (97%)
 Frame = +1

Query: 1   DGSFDLMTYRLSTQVKPLIWVEAQVERHSRSRMEIMVKARSQFKERSTATNVEIELPVPS 180
           DGSFDLMTYRLSTQVKPL+WVEAQVE+HS+SR+EIMVKARSQFKERSTATNVEIELPVP+
Sbjct: 262 DGSFDLMTYRLSTQVKPLVWVEAQVEKHSKSRIEIMVKARSQFKERSTATNVEIELPVPA 321

Query: 181 DAINPNLRTSMGSASYAPEKDAVLWKIKSFPGGKEYMLRAEFNLPSITDEEAAPDRKAPI 360
           DA NPN+RTSMGSASYAPEKDA++WKI+SFPGGKEYMLRAEF LPSI DEEA P+RKAPI
Sbjct: 322 DATNPNVRTSMGSASYAPEKDALIWKIRSFPGGKEYMLRAEFRLPSIVDEEATPERKAPI 381

Query: 361 RVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRLM 501
           RVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRL+
Sbjct: 382 RVKFEIPYFTVSGIQVRYLKIIEKSGYQALPWVRYITMAGEYELRLI 428


Top