BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000710
         (678 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34828.3| unnamed protein product [Vitis vinifera]              275   8e-72
ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   267   1e-69
emb|CAD18921.1| RNA-binding protein precursor [Persea americana]      256   2e-66
ref|XP_002867645.1| RNA-binding protein cp31 [Arabidopsis lyrata...   245   5e-63
emb|CBI14910.3| unnamed protein product [Vitis vinifera]              245   5e-63

>emb|CBI34828.3| unnamed protein product [Vitis vinifera]
          Length = 272

 Score =  275 bits (702), Expect = 8e-72
 Identities = 150/230 (65%), Positives = 168/230 (73%), Gaps = 6/230 (2%)
 Frame = +2

Query: 5   LSLPSKTITFTHLS----SSWVSVKPNISGSVLVPFVAQTSDWAQ--ESGPIDGVESDID 166
           LSLP K +   HLS    SSWVS+K   S + LVPFVAQTSDWAQ  E    DG ES+  
Sbjct: 23  LSLPPKPVRLFHLSCSCSSSWVSLKTKTSPTTLVPFVAQTSDWAQQEEEEEKDGEESEGS 82

Query: 167 IITXXXXXXXXXXXXXXXXXXXXXXXXAKIFVGNLPYDCDSEQLAKLFGQAGVVDIAEVI 346
             T                        AK+FVGNLPYD DSE+LA+LF +AGVV+IAEVI
Sbjct: 83  EDTYSEPPEE-----------------AKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVI 125

Query: 347 YNRQTDQSRGFGFVTMHTVEEAEKAVEMFSQYDLNGRFLTVNKAAPRGSPVERPARVFES 526
           YNR+TDQSRGFGF+TM TVEEAEKAVEMF++YDLNGRFLTVNKAAPRGS  ERP + FE 
Sbjct: 126 YNRETDQSRGFGFITMSTVEEAEKAVEMFNRYDLNGRFLTVNKAAPRGSRPERPPQAFEP 185

Query: 527 SYRIYVGNLPWDVDSGRLEQLFSEHGKVLDARVVSDRETGRSRGFGFVTM 676
           S+RIYVGNLPW VD  RLEQ+FSEHGKV+DARVV DR+T RSRGFGFVTM
Sbjct: 186 SFRIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTM 235



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 34/79 (43%), Positives = 48/79 (60%)
 Frame = +2

Query: 251 KIFVGNLPYDCDSEQLAKLFGQAGVVDIAEVIYNRQTDQSRGFGFVTMHTVEEAEKAVEM 430
           +I+VGNLP+  D  +L ++F + G V  A V+Y+R T +SRGFGFVTM +  E   A+  
Sbjct: 188 RIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAA 247

Query: 431 FSQYDLNGRFLTVNKAAPR 487
                L+GR + VN A  R
Sbjct: 248 LDGQSLDGRAIRVNVAEER 266


>ref|XP_002270233.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Vitis
           vinifera]
          Length = 312

 Score =  267 bits (683), Expect = 1e-69
 Identities = 149/241 (61%), Positives = 169/241 (70%), Gaps = 17/241 (7%)
 Frame = +2

Query: 5   LSLPSKTITFTHLS----SSWVSVKPNISGSVLVPFVAQTSDWAQ-----ESGPI----D 145
           LSLP K +   HLS    SSWVS+K   S + LVPFVAQTSDWAQ     E G +    +
Sbjct: 35  LSLPPKPVRLFHLSCSCSSSWVSLKTKTSPTTLVPFVAQTSDWAQQEEEEEKGGLTWDSE 94

Query: 146 GVE----SDIDIITXXXXXXXXXXXXXXXXXXXXXXXXAKIFVGNLPYDCDSEQLAKLFG 313
           G E    S  +                           AK+FVGNLPYD DSE+LA+LF 
Sbjct: 95  GGEEIEASGSEEAWEGEVGEDGEESEGSEDTYSEPPEEAKLFVGNLPYDIDSEKLAQLFD 154

Query: 314 QAGVVDIAEVIYNRQTDQSRGFGFVTMHTVEEAEKAVEMFSQYDLNGRFLTVNKAAPRGS 493
           +AGVV+IAEVIYNR+TDQSRGFGF+TM TVEEAEKAVEMF++YDLNGRFLTVNKAAPRGS
Sbjct: 155 EAGVVEIAEVIYNRETDQSRGFGFITMSTVEEAEKAVEMFNRYDLNGRFLTVNKAAPRGS 214

Query: 494 PVERPARVFESSYRIYVGNLPWDVDSGRLEQLFSEHGKVLDARVVSDRETGRSRGFGFVT 673
             ERP + FE S+RIYVGNLPW VD  RLEQ+FSEHGKV+DARVV DR+T RSRGFGFVT
Sbjct: 215 RPERPPQAFEPSFRIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVT 274

Query: 674 M 676
           M
Sbjct: 275 M 275



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 34/79 (43%), Positives = 48/79 (60%)
 Frame = +2

Query: 251 KIFVGNLPYDCDSEQLAKLFGQAGVVDIAEVIYNRQTDQSRGFGFVTMHTVEEAEKAVEM 430
           +I+VGNLP+  D  +L ++F + G V  A V+Y+R T +SRGFGFVTM +  E   A+  
Sbjct: 228 RIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAA 287

Query: 431 FSQYDLNGRFLTVNKAAPR 487
                L+GR + VN A  R
Sbjct: 288 LDGQSLDGRAIRVNVAEER 306


>emb|CAD18921.1| RNA-binding protein precursor [Persea americana]
          Length = 300

 Score =  256 bits (655), Expect = 2e-66
 Identities = 146/257 (56%), Positives = 165/257 (64%), Gaps = 32/257 (12%)
 Frame = +2

Query: 2   FLSLPSKTITFTHLS---SSWVSVK--PNISGSVLVPFVAQTSDWAQ------------- 127
           FL +PSK I   HLS   SSWVS K  P+ S   L   VAQTSDWAQ             
Sbjct: 17  FLPIPSKPIKLIHLSTSSSSWVSFKKSPSPSSRSLTTLVAQTSDWAQQEEDSNVAEATLS 76

Query: 128 --------------ESGPIDGVESDIDIITXXXXXXXXXXXXXXXXXXXXXXXXAKIFVG 265
                         ESG  DG ES  D                           AK+FVG
Sbjct: 77  DWEGEGEGEGEEQTESGAEDGEESGGD----------GFVEGGEEDSYPLPPEEAKLFVG 126

Query: 266 NLPYDCDSEQLAKLFGQAGVVDIAEVIYNRQTDQSRGFGFVTMHTVEEAEKAVEMFSQYD 445
           NLPYD D + LA+LF QAG V++AEVIYNR+TDQSRGFGFVTM TVEEAEKAVEMF++YD
Sbjct: 127 NLPYDVDHQALAELFDQAGTVEVAEVIYNRETDQSRGFGFVTMSTVEEAEKAVEMFNRYD 186

Query: 446 LNGRFLTVNKAAPRGSPVERPARVFESSYRIYVGNLPWDVDSGRLEQLFSEHGKVLDARV 625
           +NGR LTVNKAAPRG+ V+RP R FE ++R+YVGNLPW VD  RLEQ+FSEHGKV++ARV
Sbjct: 187 INGRLLTVNKAAPRGARVDRPPRAFEPAFRMYVGNLPWQVDDARLEQVFSEHGKVVEARV 246

Query: 626 VSDRETGRSRGFGFVTM 676
           V DRETGRSRGFGFVTM
Sbjct: 247 VYDRETGRSRGFGFVTM 263



 Score = 69.7 bits (169), Expect = 5e-10
 Identities = 34/79 (43%), Positives = 50/79 (63%)
 Frame = +2

Query: 251 KIFVGNLPYDCDSEQLAKLFGQAGVVDIAEVIYNRQTDQSRGFGFVTMHTVEEAEKAVEM 430
           +++VGNLP+  D  +L ++F + G V  A V+Y+R+T +SRGFGFVTM T  E + A+  
Sbjct: 216 RMYVGNLPWQVDDARLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSTQTELDDAIAA 275

Query: 431 FSQYDLNGRFLTVNKAAPR 487
                L+GR + VN A  R
Sbjct: 276 LDGQSLDGRAIRVNVAEDR 294


>ref|XP_002867645.1| RNA-binding protein cp31 [Arabidopsis lyrata subsp. lyrata]
           gi|297313481|gb|EFH43904.1| RNA-binding protein cp31
           [Arabidopsis lyrata subsp. lyrata]
          Length = 305

 Score =  245 bits (626), Expect = 5e-63
 Identities = 136/225 (60%), Positives = 157/225 (69%), Gaps = 1/225 (0%)
 Frame = +2

Query: 5   LSLPSKTITFTHLSSSWVSVKPNISGSVLVPFVAQTSDWAQESGPID-GVESDIDIITXX 181
           ++LP     F+  S S  S K ++  S  V FVAQTSDWA+E G     VE + D     
Sbjct: 50  INLPLSFSRFSRFSLSLKS-KTHLKKSPFVSFVAQTSDWAEEGGEGSVAVEENEDSFESQ 108

Query: 182 XXXXXXXXXXXXXXXXXXXXXXAKIFVGNLPYDCDSEQLAKLFGQAGVVDIAEVIYNRQT 361
                                 AK+FVGNL YD DS+ LA LF QAG V+IAEVIYNR+T
Sbjct: 109 DAEGDVSEGAEFPEPSEE----AKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRET 164

Query: 362 DQSRGFGFVTMHTVEEAEKAVEMFSQYDLNGRFLTVNKAAPRGSPVERPARVFESSYRIY 541
           DQSRGFGFVTM TVEEAE AVE F++YDLNGR LTVNKAAPRGS  ER  RV+E ++R+Y
Sbjct: 165 DQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVY 224

Query: 542 VGNLPWDVDSGRLEQLFSEHGKVLDARVVSDRETGRSRGFGFVTM 676
           VGNLPWDVD+GRLEQ+FSEHGKV++ARVV DRETGRSRGFGFVTM
Sbjct: 225 VGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTM 269



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 37/90 (41%), Positives = 54/90 (60%)
 Frame = +2

Query: 251 KIFVGNLPYDCDSEQLAKLFGQAGVVDIAEVIYNRQTDQSRGFGFVTMHTVEEAEKAVEM 430
           +++VGNLP+D D+ +L ++F + G V  A V+Y+R+T +SRGFGFVTM    E   A+  
Sbjct: 222 RVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNENELNDAIAA 281

Query: 431 FSQYDLNGRFLTVNKAAPRGSPVERPARVF 520
               ++ GR + VN A       ERP R F
Sbjct: 282 LDGQNMEGRAIRVNVAE------ERPRRGF 305


>emb|CBI14910.3| unnamed protein product [Vitis vinifera]
          Length = 306

 Score =  245 bits (626), Expect = 5e-63
 Identities = 133/216 (61%), Positives = 156/216 (72%), Gaps = 4/216 (1%)
 Frame = +2

Query: 41  LSSSWVSVKPNISGSVLVPFVAQTSDWAQ--ESGPIDGVESDIDIITXXXXXXXXXXXXX 214
           L S  + +K     S +V FVAQTSDWAQ  E   +   E   + +T             
Sbjct: 54  LFSPSLFLKSKTLSSSVVTFVAQTSDWAQQEEDNTVIIEEEQEEKVTWENEEAISDDGVV 113

Query: 215 XXXXXXXXXXX--AKIFVGNLPYDCDSEQLAKLFGQAGVVDIAEVIYNRQTDQSRGFGFV 388
                        AK+FVGNLPYD DSE+LA+LF QAGVV+IAEVIYNR+TD+SRGFGFV
Sbjct: 114 DDGEDSYSEPPEEAKVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGFV 173

Query: 389 TMHTVEEAEKAVEMFSQYDLNGRFLTVNKAAPRGSPVERPARVFESSYRIYVGNLPWDVD 568
           +M TVEEAEKAV+MF +Y+L+GR LTVNKAAPRGS  ERP RVFE ++R+YVGNLPWDVD
Sbjct: 174 SMSTVEEAEKAVDMFHRYELDGRLLTVNKAAPRGSQPERPPRVFEPAFRMYVGNLPWDVD 233

Query: 569 SGRLEQLFSEHGKVLDARVVSDRETGRSRGFGFVTM 676
           S RLEQ+FSEHGKV++ARVV DRETGRSRGFGFVTM
Sbjct: 234 SARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTM 269



 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 35/79 (44%), Positives = 52/79 (65%)
 Frame = +2

Query: 251 KIFVGNLPYDCDSEQLAKLFGQAGVVDIAEVIYNRQTDQSRGFGFVTMHTVEEAEKAVEM 430
           +++VGNLP+D DS +L ++F + G V  A V+++R+T +SRGFGFVTM +  E E A+  
Sbjct: 222 RMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAA 281

Query: 431 FSQYDLNGRFLTVNKAAPR 487
                L+GR + VN A  R
Sbjct: 282 TDGQTLDGRTIRVNVAEER 300