BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000696
         (381 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/ox...   145   3e-33
ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chai...   143   2e-32
sp|O22077.1|RBS_FAGCR RecName: Full=Ribulose bisphosphate carbox...   142   2e-32
dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   142   4e-32
sp|Q96542.1|RBS_BETVE RecName: Full=Ribulose bisphosphate carbox...   142   4e-32

>gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit [Aralia elata]
          Length = 183

 Score =  145 bits (366), Expect = 3e-33
 Identities = 75/92 (81%), Positives = 82/92 (89%), Gaps = 2/92 (2%)
 Frame = +1

Query: 112 MASSMISS--VAPITRATPAQASMVAPFTGLKSAVAFPVTRKLENDITSITSNGGRVQCM 285
           MASS+ISS  VA ++RA PAQASMVAPFTGLKS  AFPVTRK+ NDITS+ SNGGRVQCM
Sbjct: 1   MASSVISSASVAAVSRAAPAQASMVAPFTGLKSTAAFPVTRKV-NDITSLPSNGGRVQCM 59

Query: 286 KVWPPINLKKFETLSYLPPLTTEQLAKEVDYL 381
           KVWPP+ LKKFETLSYLPPLT E+LAKEVDYL
Sbjct: 60  KVWPPLGLKKFETLSYLPPLTNEELAKEVDYL 91


>ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chain 1B, chloroplast
           precursor, putative [Ricinus communis]
           gi|223539597|gb|EEF41184.1| Ribulose bisphosphate
           carboxylase small chain 1B, chloroplast precursor,
           putative [Ricinus communis]
          Length = 181

 Score =  143 bits (360), Expect = 2e-32
 Identities = 72/90 (80%), Positives = 80/90 (88%)
 Frame = +1

Query: 112 MASSMISSVAPITRATPAQASMVAPFTGLKSAVAFPVTRKLENDITSITSNGGRVQCMKV 291
           MASSMISS A ++R++PAQA+MVAPFTGLKSA +FPVTRK  NDITSI SNGGRVQCM+V
Sbjct: 1   MASSMISS-ASVSRSSPAQATMVAPFTGLKSAASFPVTRKANNDITSIASNGGRVQCMQV 59

Query: 292 WPPINLKKFETLSYLPPLTTEQLAKEVDYL 381
           WPP+  KKFETLSYLP LT EQLAKEVDYL
Sbjct: 60  WPPLGKKKFETLSYLPDLTDEQLAKEVDYL 89


>sp|O22077.1|RBS_FAGCR RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|2588890|dbj|BAA23214.1| small subunit of
           ribulose-1,5-bisphosphate carboxylase/oxygenase [Fagus
           crenata]
          Length = 182

 Score =  142 bits (359), Expect = 2e-32
 Identities = 70/92 (76%), Positives = 80/92 (86%), Gaps = 2/92 (2%)
 Frame = +1

Query: 112 MASSMISS--VAPITRATPAQASMVAPFTGLKSAVAFPVTRKLENDITSITSNGGRVQCM 285
           MASSMISS  VA ++RATPAQA+MVAPFTGLKS  AFP TRK  NDITS+ SNGGRVQCM
Sbjct: 1   MASSMISSATVATVSRATPAQATMVAPFTGLKSTAAFPATRKSNNDITSLASNGGRVQCM 60

Query: 286 KVWPPINLKKFETLSYLPPLTTEQLAKEVDYL 381
           KVWPP+ L+KFETLSYLPPL+ E LAK+++YL
Sbjct: 61  KVWPPLGLQKFETLSYLPPLSIESLAKQIEYL 92


>dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Panax ginseng]
          Length = 183

 Score =  142 bits (357), Expect = 4e-32
 Identities = 74/92 (80%), Positives = 81/92 (88%), Gaps = 2/92 (2%)
 Frame = +1

Query: 112 MASSMISS--VAPITRATPAQASMVAPFTGLKSAVAFPVTRKLENDITSITSNGGRVQCM 285
           MASS+ISS  VA ++RA PAQASMVAPFTGLKS  AFPVTRK+ NDITS+ SNGGRVQCM
Sbjct: 1   MASSVISSATVAAVSRAVPAQASMVAPFTGLKSTAAFPVTRKV-NDITSLPSNGGRVQCM 59

Query: 286 KVWPPINLKKFETLSYLPPLTTEQLAKEVDYL 381
           KVWPP+ LKKFETLSYLP LT EQL+KEVDYL
Sbjct: 60  KVWPPLGLKKFETLSYLPQLTQEQLSKEVDYL 91


>sp|Q96542.1|RBS_BETVE RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|1536889|emb|CAA69102.1|
           ribulose-bisphosphate carboxylase [Betula pendula]
          Length = 182

 Score =  142 bits (357), Expect = 4e-32
 Identities = 72/92 (78%), Positives = 81/92 (88%), Gaps = 2/92 (2%)
 Frame = +1

Query: 112 MASSMISS--VAPITRATPAQASMVAPFTGLKSAVAFPVTRKLENDITSITSNGGRVQCM 285
           MA SMISS  VA ++RA+PAQ+SMVAPFT LKS  AFPVT+K  NDITSI SNGGRVQCM
Sbjct: 1   MACSMISSATVAAVSRASPAQSSMVAPFTCLKSTSAFPVTQKTNNDITSIASNGGRVQCM 60

Query: 286 KVWPPINLKKFETLSYLPPLTTEQLAKEVDYL 381
           +VWPP+ LKKFETLSYLPPL++EQLAKEVDYL
Sbjct: 61  QVWPPLGLKKFETLSYLPPLSSEQLAKEVDYL 92