BLASTX nr result

ID: Cnidium21_contig00000685 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000685
         (1382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB87913.1| SKP1-like protein 1 [Malus x domestica]                 59   2e-06

>gb|ACB87913.1| SKP1-like protein 1 [Malus x domestica]
          Length = 156

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 33/76 (43%), Positives = 43/76 (56%)
 Frame = -3

Query: 1188 DQFFKDADPVTLFDLIQEAHHFRNKSLMDLTCQTLVSMVKRKSVTEIKTKFIINQDYDWI 1009
            DQ F   D  TLFDLI  A++   KSL+DLTCQT+  M+K K+  EI+  F IN D+   
Sbjct: 83   DQEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKGKTPEEIRKTFNINNDF--- 139

Query: 1008 NNRKPSQSITRRREKE 961
                P +    RRE +
Sbjct: 140  ---TPEEEEEVRRENQ 152


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