BLASTX nr result

ID: Cnidium21_contig00000668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000668
         (851 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAE30280.1| chlorophyll a /b binding protein [Beta vulgaris]      389   e-106
ref|XP_002514741.1| chlorophyll A/B binding protein, putative [R...   380   e-103
emb|CAK24966.1| chlorophyll a/b binding protein [Solanum tuberosum]   380   e-103
gb|AFK37078.1| unknown [Lotus japonicus]                              379   e-103
emb|CBI15210.3| unnamed protein product [Vitis vinifera]              379   e-103

>emb|CAE30280.1| chlorophyll a /b binding protein [Beta vulgaris]
          Length = 252

 Score =  389 bits (1000), Expect = e-106
 Identities = 193/261 (73%), Positives = 207/261 (79%)
 Frame = -3

Query: 792 MAAVTTQASIAGLRPCASKTRFLTGSSGKLNRXXXXXXXXXXXXXXXXXXXXXXXXXXXX 613
           MAAVTTQASIAG RPCASK+RFLTG+ GKLN+                            
Sbjct: 1   MAAVTTQASIAGFRPCASKSRFLTGAPGKLNKECGVRLPSTSSTNSLKVEAKKGEWLP-- 58

Query: 612 XXXXXXXXGLASPSYLDGSLPGDNGFDPLALAEDPENLKWFIQAELVNGRWAMLGVAGML 433
                   GLASP+YL+GSLPGDNGFDPLALAEDPENLKWF+QAELVNGRWAMLGVAGML
Sbjct: 59  --------GLASPAYLNGSLPGDNGFDPLALAEDPENLKWFVQAELVNGRWAMLGVAGML 110

Query: 432 LPEVFTKLGVINVPEWYDAGKSEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDP 253
           LPEVFT++G+INVP+WYDAGK EYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDP
Sbjct: 111 LPEVFTQIGIINVPKWYDAGKQEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDP 170

Query: 252 IFKSYSLPPGEVGYPGGIFNPLNFXXXXXXXXXXXANGRLAMLAFLGFVVQHNVTHKGPF 73
           IFK YSLPP EVGYPGGIFNPLNF           ANGRLAMLAFLGF+VQHNVT KGPF
Sbjct: 171 IFKQYSLPPNEVGYPGGIFNPLNFAPTAEAKEKELANGRLAMLAFLGFIVQHNVTGKGPF 230

Query: 72  ENLVQHLSDPWHNTIVQTFSG 10
           +NL+QHLSDPWHNTI+QTF G
Sbjct: 231 DNLLQHLSDPWHNTIIQTFGG 251


>ref|XP_002514741.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223546345|gb|EEF47847.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 251

 Score =  380 bits (977), Expect = e-103
 Identities = 190/261 (72%), Positives = 202/261 (77%)
 Frame = -3

Query: 792 MAAVTTQASIAGLRPCASKTRFLTGSSGKLNRXXXXXXXXXXXXXXXXXXXXXXXXXXXX 613
           MA VTTQAS A  RPCASK+RFL+GS  KLNR                            
Sbjct: 1   MATVTTQASAAVFRPCASKSRFLSGSPSKLNREVAFKPMSSSPASFKVEAKKGEWLP--- 57

Query: 612 XXXXXXXXGLASPSYLDGSLPGDNGFDPLALAEDPENLKWFIQAELVNGRWAMLGVAGML 433
                   GL SP+YL+GSLPGDNGFDPL LAEDPENLKWF+QAELVNGRWAMLGVAGML
Sbjct: 58  --------GLPSPAYLNGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGML 109

Query: 432 LPEVFTKLGVINVPEWYDAGKSEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDP 253
           LPEVFTK+G+INVP+WYDAGK EYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDP
Sbjct: 110 LPEVFTKIGIINVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDP 169

Query: 252 IFKSYSLPPGEVGYPGGIFNPLNFXXXXXXXXXXXANGRLAMLAFLGFVVQHNVTHKGPF 73
           IFK YSLPP EVGYPGGIFNPLNF           ANGRLAMLAFLGFV+QHNVT KGPF
Sbjct: 170 IFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFVIQHNVTGKGPF 229

Query: 72  ENLVQHLSDPWHNTIVQTFSG 10
           +NL+QHLSDPWHNTI+QTFSG
Sbjct: 230 DNLLQHLSDPWHNTIIQTFSG 250


>emb|CAK24966.1| chlorophyll a/b binding protein [Solanum tuberosum]
          Length = 251

 Score =  380 bits (976), Expect = e-103
 Identities = 191/260 (73%), Positives = 201/260 (77%)
 Frame = -3

Query: 792 MAAVTTQASIAGLRPCASKTRFLTGSSGKLNRXXXXXXXXXXXXXXXXXXXXXXXXXXXX 613
           MA VTTQAS A  RPCAS+TRFLTGSSGKLNR                            
Sbjct: 1   MATVTTQASAAIFRPCASRTRFLTGSSGKLNREVSFRPSTSSSYNSFKVEAKKGQWLP-- 58

Query: 612 XXXXXXXXGLASPSYLDGSLPGDNGFDPLALAEDPENLKWFIQAELVNGRWAMLGVAGML 433
                   GLASP YLDGSLPGDNGFDPL LAEDPENLKWFIQAELVNGRWAMLGVAGML
Sbjct: 59  --------GLASPDYLDGSLPGDNGFDPLGLAEDPENLKWFIQAELVNGRWAMLGVAGML 110

Query: 432 LPEVFTKLGVINVPEWYDAGKSEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDP 253
           LPEVFT +G++NVP+WYDAGKSEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDP
Sbjct: 111 LPEVFTSIGILNVPKWYDAGKSEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDP 170

Query: 252 IFKSYSLPPGEVGYPGGIFNPLNFXXXXXXXXXXXANGRLAMLAFLGFVVQHNVTHKGPF 73
           IFKSYSLPP + GYPGGIFNPLNF           ANGRLAMLAFLGF+VQHNVT KGPF
Sbjct: 171 IFKSYSLPPNKCGYPGGIFNPLNFAPTEEAKEKELANGRLAMLAFLGFIVQHNVTGKGPF 230

Query: 72  ENLVQHLSDPWHNTIVQTFS 13
           +NL+QHL DPWHNTI+QT S
Sbjct: 231 DNLLQHLFDPWHNTIIQTLS 250


>gb|AFK37078.1| unknown [Lotus japonicus]
          Length = 252

 Score =  379 bits (974), Expect = e-103
 Identities = 191/261 (73%), Positives = 203/261 (77%)
 Frame = -3

Query: 792 MAAVTTQASIAGLRPCASKTRFLTGSSGKLNRXXXXXXXXXXXXXXXXXXXXXXXXXXXX 613
           MA VTTQAS A  RPCAS++RFLTGSSGKLNR                            
Sbjct: 1   MATVTTQASAAIFRPCASRSRFLTGSSGKLNREVAFRPMGCPPSTSFKVEAKKGEWLP-- 58

Query: 612 XXXXXXXXGLASPSYLDGSLPGDNGFDPLALAEDPENLKWFIQAELVNGRWAMLGVAGML 433
                   GLASP+YL+GSLPGDNGFDPLALAEDPENLKWF+QAELVNGRWA LGVAGML
Sbjct: 59  --------GLASPNYLNGSLPGDNGFDPLALAEDPENLKWFVQAELVNGRWATLGVAGML 110

Query: 432 LPEVFTKLGVINVPEWYDAGKSEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDP 253
           LPEV T +G+INVP+WYDAGK+EYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDP
Sbjct: 111 LPEVLTNIGLINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDP 170

Query: 252 IFKSYSLPPGEVGYPGGIFNPLNFXXXXXXXXXXXANGRLAMLAFLGFVVQHNVTHKGPF 73
           IFK YSLPP EVGYPGGIFNPLNF           ANGRLAMLAFLGF+VQHNVT KGPF
Sbjct: 171 IFKQYSLPPNEVGYPGGIFNPLNFAPTEEAKERELANGRLAMLAFLGFIVQHNVTGKGPF 230

Query: 72  ENLVQHLSDPWHNTIVQTFSG 10
           +NL+QHLSDPWHNTIVQT SG
Sbjct: 231 DNLLQHLSDPWHNTIVQTLSG 251


>emb|CBI15210.3| unnamed protein product [Vitis vinifera]
          Length = 249

 Score =  379 bits (973), Expect = e-103
 Identities = 188/261 (72%), Positives = 202/261 (77%)
 Frame = -3

Query: 792 MAAVTTQASIAGLRPCASKTRFLTGSSGKLNRXXXXXXXXXXXXXXXXXXXXXXXXXXXX 613
           MA VTTQAS A  RPCASK+RFLTGSSGKL R                            
Sbjct: 1   MATVTTQASAAVFRPCASKSRFLTGSSGKLGREVSVKPMTSSSFKVEAKKGEWLP----- 55

Query: 612 XXXXXXXXGLASPSYLDGSLPGDNGFDPLALAEDPENLKWFIQAELVNGRWAMLGVAGML 433
                   GL+SPSYLDGSLPGDNGFDPL LAEDPENLKW++QAELVN RWAMLGVAGML
Sbjct: 56  --------GLSSPSYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVAGML 107

Query: 432 LPEVFTKLGVINVPEWYDAGKSEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDP 253
           LPEVFTK+G+IN P+WYDAGK+EYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDP
Sbjct: 108 LPEVFTKIGIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDP 167

Query: 252 IFKSYSLPPGEVGYPGGIFNPLNFXXXXXXXXXXXANGRLAMLAFLGFVVQHNVTHKGPF 73
           IFK+YSLPP EVGYPGGIFNPLNF           ANGRLAMLAFLGF+VQHNVT KGPF
Sbjct: 168 IFKNYSLPPNEVGYPGGIFNPLNFAPTEEAKEKELANGRLAMLAFLGFIVQHNVTGKGPF 227

Query: 72  ENLVQHLSDPWHNTIVQTFSG 10
           +NL+QH+SDPWHNTI+QT  G
Sbjct: 228 DNLLQHISDPWHNTIIQTLRG 248


Top