BLASTX nr result

ID: Cnidium21_contig00000667 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000667
         (926 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ84157.1| unknown [Medicago truncatula] gi|388493118|gb|AFK...   321   1e-85
ref|XP_002276513.1| PREDICTED: trafficking protein particle comp...   318   1e-84
ref|NP_001240237.1| uncharacterized protein LOC100819825 [Glycin...   314   2e-83
ref|XP_002327510.1| predicted protein [Populus trichocarpa] gi|2...   313   3e-83
ref|XP_002276578.1| PREDICTED: trafficking protein particle comp...   313   5e-83

>gb|ACJ84157.1| unknown [Medicago truncatula] gi|388493118|gb|AFK34625.1| unknown
           [Medicago truncatula] gi|388514053|gb|AFK45088.1|
           unknown [Medicago truncatula]
          Length = 169

 Score =  321 bits (823), Expect = 1e-85
 Identities = 152/168 (90%), Positives = 159/168 (94%)
 Frame = +3

Query: 123 MQFFGSSEISPSPPAPTASGNYGHMMYVFNRNGICLLYREWNRPLRTLNQQQDHKLMFGL 302
           MQFFG SEISPSPPAPTASGN GHM+YVFNRNGICLLYREWNRPL TLN QQDHKLMFGL
Sbjct: 1   MQFFGGSEISPSPPAPTASGNNGHMLYVFNRNGICLLYREWNRPLHTLNAQQDHKLMFGL 60

Query: 303 LFSLKSLTAKMDPTSVEKGNLGVPLLPGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP 482
           LFSLKSLTAKMDPTS EKGNLGVP LPGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP
Sbjct: 61  LFSLKSLTAKMDPTSAEKGNLGVPQLPGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP 120

Query: 483 KAGDLREPLKYIYNLYVEYVVKNPLYSPGTPIKSELFNTNLDQYVRGL 626
           + GDLR+ LKYIYNLYVEYVVKNPLY+PG+PI+SELFNT LDQYVRG+
Sbjct: 121 RTGDLRDSLKYIYNLYVEYVVKNPLYTPGSPIRSELFNTTLDQYVRGI 168


>ref|XP_002276513.1| PREDICTED: trafficking protein particle complex subunit 1 isoform 1
           [Vitis vinifera] gi|359490457|ref|XP_003634094.1|
           PREDICTED: trafficking protein particle complex subunit
           1 isoform 2 [Vitis vinifera]
           gi|147834231|emb|CAN66358.1| hypothetical protein
           VITISV_016122 [Vitis vinifera]
           gi|302143758|emb|CBI22619.3| unnamed protein product
           [Vitis vinifera]
          Length = 169

 Score =  318 bits (814), Expect = 1e-84
 Identities = 153/169 (90%), Positives = 156/169 (92%)
 Frame = +3

Query: 123 MQFFGSSEISPSPPAPTASGNYGHMMYVFNRNGICLLYREWNRPLRTLNQQQDHKLMFGL 302
           MQFFG SEISP PP PTASGN  HMMYVFNRNG+CLLYREWNRPLRTLN QQDHKLMFGL
Sbjct: 1   MQFFGGSEISPLPPLPTASGNNAHMMYVFNRNGVCLLYREWNRPLRTLNAQQDHKLMFGL 60

Query: 303 LFSLKSLTAKMDPTSVEKGNLGVPLLPGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP 482
           LFSLKSLTAKMDPTSVEKGNLGVP LPGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP
Sbjct: 61  LFSLKSLTAKMDPTSVEKGNLGVPQLPGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP 120

Query: 483 KAGDLREPLKYIYNLYVEYVVKNPLYSPGTPIKSELFNTNLDQYVRGLG 629
             GDLRE LKYIYNLYVEYVVKNPLYSPGTP +SELF+  LDQYVRGLG
Sbjct: 121 GTGDLRESLKYIYNLYVEYVVKNPLYSPGTPFRSELFDKALDQYVRGLG 169


>ref|NP_001240237.1| uncharacterized protein LOC100819825 [Glycine max]
           gi|255647710|gb|ACU24316.1| unknown [Glycine max]
          Length = 170

 Score =  314 bits (804), Expect = 2e-83
 Identities = 151/169 (89%), Positives = 159/169 (94%), Gaps = 1/169 (0%)
 Frame = +3

Query: 123 MQFFGSSEISPSPPAPTASGNYGHMMYVFNRNGICLLYREWNRPLRTLNQQQDHKLMFGL 302
           MQFFG SEISPSPPAPTASGN GHMMYVFNRNG+CLLYREWNRPLRTL+ QQD KLMFGL
Sbjct: 1   MQFFGGSEISPSPPAPTASGNNGHMMYVFNRNGVCLLYREWNRPLRTLDAQQDQKLMFGL 60

Query: 303 LFSLKSLTAKMDPTS-VEKGNLGVPLLPGQGCSFHSFRTNTYKLSFMESPSGIKIILVTH 479
           LFSLKSLTAKMDPTS VEKGNLG+P LPGQGCSFHSFRTNTYKLSFMESPSGIKIILVTH
Sbjct: 61  LFSLKSLTAKMDPTSAVEKGNLGMPQLPGQGCSFHSFRTNTYKLSFMESPSGIKIILVTH 120

Query: 480 PKAGDLREPLKYIYNLYVEYVVKNPLYSPGTPIKSELFNTNLDQYVRGL 626
           P+ GDLRE LKYIYNLYVEYVVKNPLY+PG+PI+ ELFNT LDQYVRG+
Sbjct: 121 PRTGDLRESLKYIYNLYVEYVVKNPLYTPGSPIRCELFNTTLDQYVRGI 169


>ref|XP_002327510.1| predicted protein [Populus trichocarpa] gi|222836064|gb|EEE74485.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score =  313 bits (803), Expect = 3e-83
 Identities = 146/168 (86%), Positives = 157/168 (93%)
 Frame = +3

Query: 123 MQFFGSSEISPSPPAPTASGNYGHMMYVFNRNGICLLYREWNRPLRTLNQQQDHKLMFGL 302
           MQFFG S+ISPSPPAPTASGN  HMMYVFNRNG+CLLYREWNRPL TLN QQDHKLMFGL
Sbjct: 1   MQFFGGSDISPSPPAPTASGNNAHMMYVFNRNGVCLLYREWNRPLHTLNAQQDHKLMFGL 60

Query: 303 LFSLKSLTAKMDPTSVEKGNLGVPLLPGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP 482
           LFSLKSLTAKMDPTS++KGNLGVP LPGQGCSFHSFRTNTYKLSFME+PSGIKIIL+THP
Sbjct: 61  LFSLKSLTAKMDPTSMDKGNLGVPQLPGQGCSFHSFRTNTYKLSFMETPSGIKIILITHP 120

Query: 483 KAGDLREPLKYIYNLYVEYVVKNPLYSPGTPIKSELFNTNLDQYVRGL 626
           K GDLRE LKYIYNLYVEYVVKNP+Y+PG PI+ ELFNT+LDQYVR +
Sbjct: 121 KTGDLRESLKYIYNLYVEYVVKNPIYTPGAPIRCELFNTSLDQYVRSI 168


>ref|XP_002276578.1| PREDICTED: trafficking protein particle complex subunit 1 isoform 1
           [Vitis vinifera] gi|359490712|ref|XP_003634147.1|
           PREDICTED: trafficking protein particle complex subunit
           1 isoform 2 [Vitis vinifera]
           gi|302143925|emb|CBI23030.3| unnamed protein product
           [Vitis vinifera]
          Length = 169

 Score =  313 bits (801), Expect = 5e-83
 Identities = 150/169 (88%), Positives = 155/169 (91%)
 Frame = +3

Query: 123 MQFFGSSEISPSPPAPTASGNYGHMMYVFNRNGICLLYREWNRPLRTLNQQQDHKLMFGL 302
           MQFFG S+ISP PP PTASGN  HMMYVFN+NG+CLLYREWNR LRTLN QQDHKLMFGL
Sbjct: 1   MQFFGGSDISPLPPPPTASGNNAHMMYVFNKNGVCLLYREWNRSLRTLNAQQDHKLMFGL 60

Query: 303 LFSLKSLTAKMDPTSVEKGNLGVPLLPGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP 482
           LFSLKSLTAKMDPTSVEKGNLGVP L GQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP
Sbjct: 61  LFSLKSLTAKMDPTSVEKGNLGVPQLTGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHP 120

Query: 483 KAGDLREPLKYIYNLYVEYVVKNPLYSPGTPIKSELFNTNLDQYVRGLG 629
           + GDLRE LKYIYNLYVEYVVKNPLYSPG PI+SELFN  LDQYVRGLG
Sbjct: 121 RTGDLRESLKYIYNLYVEYVVKNPLYSPGMPIRSELFNMTLDQYVRGLG 169


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