BLASTX nr result

ID: Cnidium21_contig00000646 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000646
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510577.1| skp1, putative [Ricinus communis] gi|2235512...   141   5e-32
dbj|BAJ53099.1| JHL20J20.6 [Jatropha curcas]                          140   1e-31
gb|ABS17589.1| SKP1 component-like 1 [Humulus lupulus]                140   1e-31
gb|AAT99735.1| SKP1 [Nicotiana tabacum]                               139   3e-31
gb|AFB18000.1| SKP1 protein [Nicotiana tabacum]                       138   4e-31

>ref|XP_002510577.1| skp1, putative [Ricinus communis] gi|223551278|gb|EEF52764.1| skp1,
           putative [Ricinus communis]
          Length = 157

 Score =  141 bits (356), Expect = 5e-32
 Identities = 69/89 (77%), Positives = 77/89 (86%)
 Frame = +3

Query: 141 DNETFEVPEAVALESQTIKHMVEDDCANTTIPLPNVTGSILAKVIEYCKHHVEAPKSEDG 320
           D ETFEV E VALESQTIKHM+EDDCA++ IPLPNVT  IL+KVIEYCK HVE PKSED 
Sbjct: 13  DGETFEVEELVALESQTIKHMIEDDCADSGIPLPNVTSKILSKVIEYCKKHVETPKSEDR 72

Query: 321 AAKPDEDLKAFDADFVKVDQATLFDLILA 407
            +  D+DLKA+DA+FVKVDQATLFDLILA
Sbjct: 73  PSSADDDLKAWDAEFVKVDQATLFDLILA 101


>dbj|BAJ53099.1| JHL20J20.6 [Jatropha curcas]
          Length = 100

 Score =  140 bits (352), Expect = 1e-31
 Identities = 68/88 (77%), Positives = 75/88 (85%)
 Frame = +3

Query: 141 DNETFEVPEAVALESQTIKHMVEDDCANTTIPLPNVTGSILAKVIEYCKHHVEAPKSEDG 320
           D ETFEV EAVALESQTIKHM+EDDCA+  IPLPNVT  IL+KVIEYCK HVE PKS+D 
Sbjct: 13  DGETFEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVETPKSDDR 72

Query: 321 AAKPDEDLKAFDADFVKVDQATLFDLIL 404
            +  DE+LK +DADFVKVDQATLFDLIL
Sbjct: 73  PSSADEELKTWDADFVKVDQATLFDLIL 100


>gb|ABS17589.1| SKP1 component-like 1 [Humulus lupulus]
          Length = 157

 Score =  140 bits (352), Expect = 1e-31
 Identities = 69/89 (77%), Positives = 77/89 (86%)
 Frame = +3

Query: 141 DNETFEVPEAVALESQTIKHMVEDDCANTTIPLPNVTGSILAKVIEYCKHHVEAPKSEDG 320
           D ET EV EAVALESQTIKHM+EDDCA+  IPLPNVT  IL+KVIEYCK HV APK+ED 
Sbjct: 13  DGETLEVDEAVALESQTIKHMIEDDCADNGIPLPNVTSKILSKVIEYCKKHVGAPKAEDR 72

Query: 321 AAKPDEDLKAFDADFVKVDQATLFDLILA 407
           A+  D++LKA+DADFVKVDQATLFDLILA
Sbjct: 73  ASSVDDELKAWDADFVKVDQATLFDLILA 101


>gb|AAT99735.1| SKP1 [Nicotiana tabacum]
          Length = 155

 Score =  139 bits (349), Expect = 3e-31
 Identities = 69/89 (77%), Positives = 79/89 (88%)
 Frame = +3

Query: 141 DNETFEVPEAVALESQTIKHMVEDDCANTTIPLPNVTGSILAKVIEYCKHHVEAPKSEDG 320
           D ETFEV EAVALESQTIKHM+EDDCA+T+IPLPNVT  ILAKVIEYCK HV+A K+ED 
Sbjct: 13  DGETFEVEEAVALESQTIKHMIEDDCADTSIPLPNVTSKILAKVIEYCKRHVDATKTEDK 72

Query: 321 AAKPDEDLKAFDADFVKVDQATLFDLILA 407
           A+  +++LK FD+DFVKVDQATLFDLILA
Sbjct: 73  AS--EDELKGFDSDFVKVDQATLFDLILA 99


>gb|AFB18000.1| SKP1 protein [Nicotiana tabacum]
          Length = 155

 Score =  138 bits (348), Expect = 4e-31
 Identities = 69/89 (77%), Positives = 78/89 (87%)
 Frame = +3

Query: 141 DNETFEVPEAVALESQTIKHMVEDDCANTTIPLPNVTGSILAKVIEYCKHHVEAPKSEDG 320
           D ETFEV EAVALESQTIKHM+EDDCA T+IPLPNVT  ILAKVIEYCK HV+A K+ED 
Sbjct: 13  DGETFEVEEAVALESQTIKHMIEDDCAGTSIPLPNVTSKILAKVIEYCKRHVDATKTEDK 72

Query: 321 AAKPDEDLKAFDADFVKVDQATLFDLILA 407
           A+  +++LK FD+DFVKVDQATLFDLILA
Sbjct: 73  AS--EDELKGFDSDFVKVDQATLFDLILA 99


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