BLASTX nr result

ID: Cnidium21_contig00000623 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000623
         (640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316799.1| predicted protein [Populus trichocarpa] gi|2...   171   1e-40
ref|XP_002300406.1| predicted protein [Populus trichocarpa] gi|2...   170   2e-40
ref|XP_002522506.1| Transcription elongation factor, putative [R...   169   3e-40
gb|ABK92767.1| unknown [Populus trichocarpa] gi|118489754|gb|ABK...   169   4e-40
emb|CBI30630.3| unnamed protein product [Vitis vinifera]              169   5e-40

>ref|XP_002316799.1| predicted protein [Populus trichocarpa] gi|222859864|gb|EEE97411.1|
           predicted protein [Populus trichocarpa]
          Length = 157

 Score =  171 bits (433), Expect = 1e-40
 Identities = 79/91 (86%), Positives = 84/91 (92%)
 Frame = +1

Query: 82  DLSMGKRKSRAKPATKKRMDKLDTVFSCPFCNHGSSVECRIDMKNLIGEATCGICQESFS 261
           +L MGKRKS AKP  KKRMDKLDTVFSCPFCNHG+SVECRIDMKNLIGEA CGICQESFS
Sbjct: 67  NLQMGKRKSTAKPPPKKRMDKLDTVFSCPFCNHGTSVECRIDMKNLIGEAVCGICQESFS 126

Query: 262 TTVTALTEPIDIYSEWIDECERVNTYEEDGA 354
            T+TALTEPIDIYSEWIDECERVN+ E+DGA
Sbjct: 127 MTITALTEPIDIYSEWIDECERVNSLEDDGA 157


>ref|XP_002300406.1| predicted protein [Populus trichocarpa] gi|222847664|gb|EEE85211.1|
           predicted protein [Populus trichocarpa]
          Length = 88

 Score =  170 bits (431), Expect = 2e-40
 Identities = 78/88 (88%), Positives = 83/88 (94%)
 Frame = +1

Query: 91  MGKRKSRAKPATKKRMDKLDTVFSCPFCNHGSSVECRIDMKNLIGEATCGICQESFSTTV 270
           MGKRKSRAKP  KKRMDKLDTVFSCPFCNHG+SVECRIDMKNLIGEA CGICQE+FS T+
Sbjct: 1   MGKRKSRAKPPPKKRMDKLDTVFSCPFCNHGTSVECRIDMKNLIGEAVCGICQENFSMTI 60

Query: 271 TALTEPIDIYSEWIDECERVNTYEEDGA 354
           TALTEPIDIYSEWIDECERVN+ E+DGA
Sbjct: 61  TALTEPIDIYSEWIDECERVNSLEDDGA 88


>ref|XP_002522506.1| Transcription elongation factor, putative [Ricinus communis]
           gi|223538197|gb|EEF39806.1| Transcription elongation
           factor, putative [Ricinus communis]
          Length = 88

 Score =  169 bits (429), Expect = 3e-40
 Identities = 77/88 (87%), Positives = 82/88 (93%)
 Frame = +1

Query: 91  MGKRKSRAKPATKKRMDKLDTVFSCPFCNHGSSVECRIDMKNLIGEATCGICQESFSTTV 270
           MGKRKSRAKP  KKRMDKLDTVFSCPFCNHG+SVECRIDMKNLIGEA C ICQESFSTT+
Sbjct: 1   MGKRKSRAKPPPKKRMDKLDTVFSCPFCNHGTSVECRIDMKNLIGEAVCAICQESFSTTI 60

Query: 271 TALTEPIDIYSEWIDECERVNTYEEDGA 354
           TALTEPID+YSEWIDECERVN  ++DGA
Sbjct: 61  TALTEPIDVYSEWIDECERVNNVDDDGA 88


>gb|ABK92767.1| unknown [Populus trichocarpa] gi|118489754|gb|ABK96677.1| unknown
           [Populus trichocarpa x Populus deltoides]
          Length = 88

 Score =  169 bits (428), Expect = 4e-40
 Identities = 78/88 (88%), Positives = 82/88 (93%)
 Frame = +1

Query: 91  MGKRKSRAKPATKKRMDKLDTVFSCPFCNHGSSVECRIDMKNLIGEATCGICQESFSTTV 270
           MGKRKS AKP  KKRMDKLDTVFSCPFCNHG+SVECRIDMKNLIGEA CGICQESFS T+
Sbjct: 1   MGKRKSTAKPPPKKRMDKLDTVFSCPFCNHGTSVECRIDMKNLIGEAVCGICQESFSMTI 60

Query: 271 TALTEPIDIYSEWIDECERVNTYEEDGA 354
           TALTEPIDIYSEWIDECERVN+ E+DGA
Sbjct: 61  TALTEPIDIYSEWIDECERVNSLEDDGA 88


>emb|CBI30630.3| unnamed protein product [Vitis vinifera]
          Length = 128

 Score =  169 bits (427), Expect = 5e-40
 Identities = 81/91 (89%), Positives = 84/91 (92%), Gaps = 1/91 (1%)
 Frame = +1

Query: 82  DLS-MGKRKSRAKPATKKRMDKLDTVFSCPFCNHGSSVECRIDMKNLIGEATCGICQESF 258
           DLS MGKRKSRAKP  KKRMDKLDTVFSCPFCNHG+ VECRIDMKNLIGEA+C ICQESF
Sbjct: 30  DLSYMGKRKSRAKPPPKKRMDKLDTVFSCPFCNHGTGVECRIDMKNLIGEASCRICQESF 89

Query: 259 STTVTALTEPIDIYSEWIDECERVNTYEEDG 351
           STTVTALTEPIDIYSEWIDECERVN  E+DG
Sbjct: 90  STTVTALTEPIDIYSEWIDECERVNNLEDDG 120


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