BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000536
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/ox...   146   1e-33
ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chai...   144   7e-33
sp|O22077.1|RBS_FAGCR RecName: Full=Ribulose bisphosphate carbox...   144   1e-32
dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   143   2e-32
sp|Q96542.1|RBS_BETVE RecName: Full=Ribulose bisphosphate carbox...   143   2e-32

>gb|AFO67218.1| putative ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit [Aralia elata]
          Length = 183

 Score =  146 bits (369), Expect = 1e-33
 Identities = 77/92 (83%), Positives = 82/92 (89%), Gaps = 2/92 (2%)
 Frame = +2

Query: 38  MASSMISS--VAPVTRATPAQASMVAPFTGLKSAVAFPVTRKLENDITSITSNGGRVQCM 211
           MASS+ISS  VA V+RA PAQASMVAPFTGLKS  AFPVTRK+ NDITS+ SNGGRVQCM
Sbjct: 1   MASSVISSASVAAVSRAAPAQASMVAPFTGLKSTAAFPVTRKV-NDITSLPSNGGRVQCM 59

Query: 212 KVWPPLNLKKFETLSYLPPLTTEQLAKEVDYL 307
           KVWPPL LKKFETLSYLPPLT E+LAKEVDYL
Sbjct: 60  KVWPPLGLKKFETLSYLPPLTNEELAKEVDYL 91


>ref|XP_002521232.1| Ribulose bisphosphate carboxylase small chain 1B, chloroplast
           precursor, putative [Ricinus communis]
           gi|223539597|gb|EEF41184.1| Ribulose bisphosphate
           carboxylase small chain 1B, chloroplast precursor,
           putative [Ricinus communis]
          Length = 181

 Score =  144 bits (363), Expect = 7e-33
 Identities = 74/90 (82%), Positives = 80/90 (88%)
 Frame = +2

Query: 38  MASSMISSVAPVTRATPAQASMVAPFTGLKSAVAFPVTRKLENDITSITSNGGRVQCMKV 217
           MASSMISS A V+R++PAQA+MVAPFTGLKSA +FPVTRK  NDITSI SNGGRVQCM+V
Sbjct: 1   MASSMISS-ASVSRSSPAQATMVAPFTGLKSAASFPVTRKANNDITSIASNGGRVQCMQV 59

Query: 218 WPPLNLKKFETLSYLPPLTTEQLAKEVDYL 307
           WPPL  KKFETLSYLP LT EQLAKEVDYL
Sbjct: 60  WPPLGKKKFETLSYLPDLTDEQLAKEVDYL 89


>sp|O22077.1|RBS_FAGCR RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|2588890|dbj|BAA23214.1| small subunit of
           ribulose-1,5-bisphosphate carboxylase/oxygenase [Fagus
           crenata]
          Length = 182

 Score =  144 bits (362), Expect = 1e-32
 Identities = 72/92 (78%), Positives = 80/92 (86%), Gaps = 2/92 (2%)
 Frame = +2

Query: 38  MASSMISS--VAPVTRATPAQASMVAPFTGLKSAVAFPVTRKLENDITSITSNGGRVQCM 211
           MASSMISS  VA V+RATPAQA+MVAPFTGLKS  AFP TRK  NDITS+ SNGGRVQCM
Sbjct: 1   MASSMISSATVATVSRATPAQATMVAPFTGLKSTAAFPATRKSNNDITSLASNGGRVQCM 60

Query: 212 KVWPPLNLKKFETLSYLPPLTTEQLAKEVDYL 307
           KVWPPL L+KFETLSYLPPL+ E LAK+++YL
Sbjct: 61  KVWPPLGLQKFETLSYLPPLSIESLAKQIEYL 92


>dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Panax ginseng]
          Length = 183

 Score =  143 bits (360), Expect = 2e-32
 Identities = 76/92 (82%), Positives = 81/92 (88%), Gaps = 2/92 (2%)
 Frame = +2

Query: 38  MASSMISS--VAPVTRATPAQASMVAPFTGLKSAVAFPVTRKLENDITSITSNGGRVQCM 211
           MASS+ISS  VA V+RA PAQASMVAPFTGLKS  AFPVTRK+ NDITS+ SNGGRVQCM
Sbjct: 1   MASSVISSATVAAVSRAVPAQASMVAPFTGLKSTAAFPVTRKV-NDITSLPSNGGRVQCM 59

Query: 212 KVWPPLNLKKFETLSYLPPLTTEQLAKEVDYL 307
           KVWPPL LKKFETLSYLP LT EQL+KEVDYL
Sbjct: 60  KVWPPLGLKKFETLSYLPQLTQEQLSKEVDYL 91


>sp|Q96542.1|RBS_BETVE RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|1536889|emb|CAA69102.1|
           ribulose-bisphosphate carboxylase [Betula pendula]
          Length = 182

 Score =  143 bits (360), Expect = 2e-32
 Identities = 74/92 (80%), Positives = 81/92 (88%), Gaps = 2/92 (2%)
 Frame = +2

Query: 38  MASSMISS--VAPVTRATPAQASMVAPFTGLKSAVAFPVTRKLENDITSITSNGGRVQCM 211
           MA SMISS  VA V+RA+PAQ+SMVAPFT LKS  AFPVT+K  NDITSI SNGGRVQCM
Sbjct: 1   MACSMISSATVAAVSRASPAQSSMVAPFTCLKSTSAFPVTQKTNNDITSIASNGGRVQCM 60

Query: 212 KVWPPLNLKKFETLSYLPPLTTEQLAKEVDYL 307
           +VWPPL LKKFETLSYLPPL++EQLAKEVDYL
Sbjct: 61  QVWPPLGLKKFETLSYLPPLSSEQLAKEVDYL 92