BLASTX nr result
ID: Cnidium21_contig00000532
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00000532
(3027 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum ... 448 0.0
gb|ABW74566.1| integrase [Boechera divaricarpa] 424 e-176
emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera] 441 e-173
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera] 426 e-167
emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera] 352 e-158
>gb|AAT38758.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1333
Score = 448 bits (1153), Expect(2) = 0.0
Identities = 221/306 (72%), Positives = 254/306 (83%), Gaps = 1/306 (0%)
Frame = +1
Query: 1276 NFPWELVDLPEGKNAIGLKWVFRTKYHADGSIQKQKARLVAKGYAQEHGVDYDETFAPVA 1455
N WELVD PEGKN IGLKWVFRTKY+ADGSIQK KARLVAKGY+Q+ GVD+DETF+PVA
Sbjct: 845 NSTWELVDAPEGKNVIGLKWVFRTKYNADGSIQKHKARLVAKGYSQQQGVDFDETFSPVA 904
Query: 1456 RFETVRTFLALAAQLGWPVFQFDVKSAFLNGDLKEEVYVVQPEGFIVPGAEKKVYRLRKA 1635
RFETVR LALAAQL PV+QFDVKSAFLNGDL+EEVYV QP+GF++ G E KVY+LRKA
Sbjct: 905 RFETVRVVLALAAQLHLPVYQFDVKSAFLNGDLEEEVYVSQPQGFMITGNENKVYKLRKA 964
Query: 1636 LYGLKQASHEWYKKIDSYFLENNFERSDNEPTLYLKRQGTD-FFVVCLYVDDMIYMGSCE 1812
LYGLKQA WY KIDS+F + F RSDNEPTLYLK+QGTD F +VCLYVDDMIY+GS +
Sbjct: 965 LYGLKQAPRAWYSKIDSFFQGSGFRRSDNEPTLYLKKQGTDEFLLVCLYVDDMIYIGSSK 1024
Query: 1813 PIVAEFKSSMRKQFEMSDLGLLHYFLGLEVKQGIDGIFISQQKFAEDLLKKFHVTGSTAA 1992
+V +FKS+M + FEMSDLGLL YFLGLEV Q DGIFISQ+K+AEDLLKKF + A
Sbjct: 1025 SLVNDFKSNMMRNFEMSDLGLLKYFLGLEVIQDKDGIFISQKKYAEDLLKKFQMMNCEVA 1084
Query: 1993 STPMNINEKLSSNDGTGAANANLYRSMVGGLNYLSHTRPDIAHSVGIVSRFMHNPSKHHL 2172
+TPMNINEKL DGT AN L+RS+VGGLNYL+HTRPDIA SV +VSRF+ +P+K H
Sbjct: 1085 TTPMNINEKLQRADGTEKANPKLFRSLVGGLNYLTHTRPDIAFSVSVVSRFLQSPTKQHF 1144
Query: 2173 GAVKRI 2190
GA KR+
Sbjct: 1145 GAAKRV 1150
Score = 229 bits (585), Expect(2) = 0.0
Identities = 108/187 (57%), Positives = 144/187 (77%)
Frame = +3
Query: 2175 SGEKDFHYIAGTPDFGIWYHKVDDMKLIGYSDSDRAGSLDDRKSTSAYVFTLGSGVISWS 2354
+ ++ Y+AGT DFGIWY K + +L+G++DSD AG LDDRKSTS F+ GSGV++WS
Sbjct: 1146 AAKRVLRYVAGTTDFGIWYSKAPNFRLVGFTDSDYAGCLDDRKSTSGSCFSFGSGVVTWS 1205
Query: 2355 SKKQSTVALSSTEVEYVSLTSAACQAIWLRRLLADFLQVQQEATELYCDNISAIRMTQSP 2534
SKKQ TVALS++E EY + + AA QA+WLR+LL DF Q+E+TE++ D+ SAI M ++P
Sbjct: 1206 SKKQETVALSTSEAEYTAASLAARQALWLRKLLEDFSYEQKESTEIFSDSKSAIAMAKNP 1265
Query: 2535 VYHGRTKHIEIRHHFIRELVENGQITVTFCGTNQQMADIPTKSLASGK*EYFRKQMGVCN 2714
+HGRTKHI++++HFIR LV +G+I + FC TN+Q ADI TKSL K EYFR Q+GVC+
Sbjct: 1266 SFHGRTKHIDVQYHFIRTLVADGRIVLKFCSTNEQAADIFTKSLPQAKHEYFRLQLGVCD 1325
Query: 2715 FESRGYV 2735
FESRG V
Sbjct: 1326 FESRGSV 1332
>gb|ABW74566.1| integrase [Boechera divaricarpa]
Length = 1165
Score = 424 bits (1090), Expect(2) = e-176
Identities = 206/311 (66%), Positives = 250/311 (80%), Gaps = 1/311 (0%)
Frame = +1
Query: 1261 ASNTVNFPWELVDLPEGKNAIGLKWVFRTKYHADGSIQKQKARLVAKGYAQEHGVDYDET 1440
AS N W+LV+LPE K++IG+KWVF+TKY AD +IQK KARLV KGYAQE+GVDY++T
Sbjct: 671 ASIEKNQTWQLVELPEEKHSIGVKWVFKTKYQADDNIQKYKARLVVKGYAQEYGVDYEKT 730
Query: 1441 FAPVARFETVRTFLALAAQLGWPVFQFDVKSAFLNGDLKEEVYVVQPEGFIVPGAEKKVY 1620
F+PVARF+T+RT LAL A + WP++QFDVKSAFLNG+L+EEVYV QPEGFIV G E VY
Sbjct: 731 FSPVARFDTLRTLLALGAYMHWPIYQFDVKSAFLNGELREEVYVDQPEGFIVEGREGFVY 790
Query: 1621 RLRKALYGLKQASHEWYKKIDSYFLENNFERSDNEPTLYLKRQGT-DFFVVCLYVDDMIY 1797
RL KALYGLKQA WY KIDSYF E FERS +EPTLY+K+QG D VVCLYVDDMIY
Sbjct: 791 RLYKALYGLKQAPRAWYNKIDSYFAETGFERSKSEPTLYIKKQGAGDILVVCLYVDDMIY 850
Query: 1798 MGSCEPIVAEFKSSMRKQFEMSDLGLLHYFLGLEVKQGIDGIFISQQKFAEDLLKKFHVT 1977
MGS +V+EFK+SM ++FEM+DLGLL++FLGLEVKQ DG+F+SQ K+A DLLK+F +
Sbjct: 851 MGSSASLVSEFKASMMEKFEMTDLGLLYFFLGLEVKQVEDGVFVSQHKYACDLLKRFDMA 910
Query: 1978 GSTAASTPMNINEKLSSNDGTGAANANLYRSMVGGLNYLSHTRPDIAHSVGIVSRFMHNP 2157
G A TPMN+NEKL + DGT A+A +RS+VGGL YL+HTRPDI +V +SRFMH P
Sbjct: 911 GCNAVETPMNVNEKLLAGDGTEKADATKFRSLVGGLIYLTHTRPDICFAVSAISRFMHGP 970
Query: 2158 SKHHLGAVKRI 2190
+K H GA KR+
Sbjct: 971 TKQHFGAAKRL 981
Score = 223 bits (569), Expect(2) = e-176
Identities = 100/176 (56%), Positives = 134/176 (76%)
Frame = +3
Query: 2196 YIAGTPDFGIWYHKVDDMKLIGYSDSDRAGSLDDRKSTSAYVFTLGSGVISWSSKKQSTV 2375
YIA T ++G+WY V KL+G++DSD AG + DRKSTS +VF LGSG + WSSKKQ+
Sbjct: 984 YIARTAEYGLWYCSVSKFKLVGFTDSDWAGCVQDRKSTSGHVFNLGSGAVCWSSKKQNVT 1043
Query: 2376 ALSSTEVEYVSLTSAACQAIWLRRLLADFLQVQQEATELYCDNISAIRMTQSPVYHGRTK 2555
ALSS+E EY + T+AACQA+WLRR+LAD Q Q++AT ++CDN + I M ++P YHGRTK
Sbjct: 1044 ALSSSEAEYTAATAAACQAVWLRRILADIKQEQEKATTIFCDNKATIAMNKNPAYHGRTK 1103
Query: 2556 HIEIRHHFIRELVENGQITVTFCGTNQQMADIPTKSLASGK*EYFRKQMGVCNFES 2723
HI I+ HFIR+LV G +T+ +C TN+Q AD+ TK+L+ K +YFR ++GVC FES
Sbjct: 1104 HISIKVHFIRDLVSEGSVTLEYCSTNEQSADVLTKALSRNKFDYFRSKLGVCKFES 1159
>emb|CAN60238.1| hypothetical protein VITISV_032906 [Vitis vinifera]
Length = 1430
Score = 441 bits (1134), Expect(2) = e-173
Identities = 214/306 (69%), Positives = 251/306 (82%), Gaps = 1/306 (0%)
Frame = +1
Query: 1276 NFPWELVDLPEGKNAIGLKWVFRTKYHADGSIQKQKARLVAKGYAQEHGVDYDETFAPVA 1455
N WELV+LPE KN IG+KWVFRTKY ADGSIQK KARLVAKGYAQ+HGVDYD+TF+PVA
Sbjct: 945 NETWELVELPEDKNVIGVKWVFRTKYLADGSIQKHKARLVAKGYAQQHGVDYDDTFSPVA 1004
Query: 1456 RFETVRTFLALAAQLGWPVFQFDVKSAFLNGDLKEEVYVVQPEGFIVPGAEKKVYRLRKA 1635
RFETVRT LALAA + W V+QFDVKSAFLNG+L EEVY QPEGFIVP E+ VYRL+ A
Sbjct: 1005 RFETVRTLLALAAHMHWCVYQFDVKSAFLNGELVEEVYXSQPEGFIVPDKEEHVYRLKXA 1064
Query: 1636 LYGLKQASHEWYKKIDSYFLENNFERSDNEPTLYLKRQG-TDFFVVCLYVDDMIYMGSCE 1812
LYGLKQA WY KIDSYF+EN FE+S +EP LYLKRQG D ++CLYVDDMIYMGS
Sbjct: 1065 LYGLKQAPRAWYSKIDSYFVENGFEKSKSEPNLYLKRQGKNDLLIICLYVDDMIYMGSSS 1124
Query: 1813 PIVAEFKSSMRKQFEMSDLGLLHYFLGLEVKQGIDGIFISQQKFAEDLLKKFHVTGSTAA 1992
++ EFK+ M+K+FEMSDLGLLH+FLGLEVKQ DG+F+SQ+K+A DLLKKF++
Sbjct: 1125 SLINEFKACMKKKFEMSDLGLLHFFLGLEVKQVEDGVFVSQRKYAVDLLKKFNMLNCKVV 1184
Query: 1993 STPMNINEKLSSNDGTGAANANLYRSMVGGLNYLSHTRPDIAHSVGIVSRFMHNPSKHHL 2172
+ PMN NEKL + DGT A+A +RS+VGGL YL+HTRPDIA +VG++SRFMH PSK HL
Sbjct: 1185 AIPMNSNEKLQAEDGTERADARRFRSLVGGLIYLTHTRPDIAFAVGVISRFMHCPSKQHL 1244
Query: 2173 GAVKRI 2190
GA KR+
Sbjct: 1245 GATKRL 1250
Score = 195 bits (496), Expect(2) = e-173
Identities = 95/177 (53%), Positives = 123/177 (69%)
Frame = +3
Query: 2196 YIAGTPDFGIWYHKVDDMKLIGYSDSDRAGSLDDRKSTSAYVFTLGSGVISWSSKKQSTV 2375
YIAGT DF IW V + KL+GY+DSD AG L+DRKSTS Y+F+LGS
Sbjct: 1253 YIAGTYDFRIWXGHVQEFKLVGYTDSDWAGCLEDRKSTSGYMFSLGSA------------ 1300
Query: 2376 ALSSTEVEYVSLTSAACQAIWLRRLLADFLQVQQEATELYCDNISAIRMTQSPVYHGRTK 2555
EY TS+ACQA+WLRR+LAD Q +E T +YCDN +AI MT++P YHGRTK
Sbjct: 1301 -------EYTVATSSACQAVWLRRILADINQEHEEPTVIYCDNKAAIAMTKNPAYHGRTK 1353
Query: 2556 HIEIRHHFIRELVENGQITVTFCGTNQQMADIPTKSLASGK*EYFRKQMGVCNFESR 2726
H++IR HFIR+LV G++ + +C TN+Q+AD+ TK+L+ K YFR ++GVCNFESR
Sbjct: 1354 HVDIRVHFIRDLVVEGKVVLQYCNTNEQVADVLTKALSRDKHVYFRSKLGVCNFESR 1410
Score = 145 bits (366), Expect(2) = 3e-32
Identities = 71/137 (51%), Positives = 90/137 (65%)
Frame = +3
Query: 2196 YIAGTPDFGIWYHKVDDMKLIGYSDSDRAGSLDDRKSTSAYVFTLGSGVISWSSKKQSTV 2375
YIAGT DF IWY V + KL+GY+DSD AG + W SKKQ+
Sbjct: 18 YIAGTYDFRIWYGHVQEFKLVGYTDSDWAGX------------------VCWXSKKQAVT 59
Query: 2376 ALSSTEVEYVSLTSAACQAIWLRRLLADFLQVQQEATELYCDNISAIRMTQSPVYHGRTK 2555
LSS+E EY + TS+ACQA+WLRR+L D Q +E T +YCDN +AI MT++P YHGRTK
Sbjct: 60 XLSSSEAEYTAXTSSACQAVWLRRILXDINQEHEEXTVIYCDNKAAIAMTKNPAYHGRTK 119
Query: 2556 HIEIRHHFIRELVENGQ 2606
H++IR HFIR+LV G+
Sbjct: 120 HVDIRVHFIRDLVVEGE 136
Score = 22.3 bits (46), Expect(2) = 3e-32
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 2146 MHNPSKHHLGAVKRI 2190
MH SK HLGA R+
Sbjct: 1 MHCSSKQHLGAAXRL 15
>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
Length = 1472
Score = 426 bits (1095), Expect(2) = e-167
Identities = 209/306 (68%), Positives = 245/306 (80%), Gaps = 1/306 (0%)
Frame = +1
Query: 1276 NFPWELVDLPEGKNAIGLKWVFRTKYHADGSIQKQKARLVAKGYAQEHGVDYDETFAPVA 1455
N WELV+LPE KN IG+KWVFRTKY ADGSIQK KARLVAKGYAQ+HGVDYD+TF+PVA
Sbjct: 774 NETWELVELPEDKNVIGVKWVFRTKYLADGSIQKHKARLVAKGYAQQHGVDYDDTFSPVA 833
Query: 1456 RFETVRTFLALAAQLGWPVFQFDVKSAFLNGDLKEEVYVVQPEGFIVPGAEKKVYRLRKA 1635
RFETVRT LALAA + W +QFDVKSAFLNG+L EEVYV Q EGFIVP E+ VYRL+KA
Sbjct: 834 RFETVRTLLALAAHMHWCXYQFDVKSAFLNGELVEEVYVSQXEGFIVPXKEEHVYRLKKA 893
Query: 1636 LYGLKQASHEWYKKIDSYFLENNFERSDNEPTLYLKRQG-TDFFVVCLYVDDMIYMGSCE 1812
LYGLKQA WY KIDSYF+EN FERS +EP LYLKRQG D ++CLYVDDMIYMGS
Sbjct: 894 LYGLKQAPRAWYSKIDSYFVENGFERSKSEPNLYLKRQGKNDLLIICLYVDDMIYMGSSS 953
Query: 1813 PIVAEFKSSMRKQFEMSDLGLLHYFLGLEVKQGIDGIFISQQKFAEDLLKKFHVTGSTAA 1992
++ EFK+ M+K+FEMS+LGLLH+FL LEVKQ DG+F+SQ+K+ DLLKKF++
Sbjct: 954 SLINEFKACMKKKFEMSBLGLLHFFLXLEVKQVEDGVFVSQRKYXVDLLKKFNMLNCKVV 1013
Query: 1993 STPMNINEKLSSNDGTGAANANLYRSMVGGLNYLSHTRPDIAHSVGIVSRFMHNPSKHHL 2172
+T MN NEKL + DGT A+A + S+V GL YL+HTRPDIA V ++SRFMH PSK HL
Sbjct: 1014 ATXMNSNEKLQAEDGTERADARRFXSLVRGLIYLTHTRPDIAFPVEVISRFMHCPSKQHL 1073
Query: 2173 GAVKRI 2190
GA KR+
Sbjct: 1074 GAAKRL 1079
Score = 192 bits (489), Expect(2) = e-167
Identities = 89/145 (61%), Positives = 111/145 (76%)
Frame = +3
Query: 2196 YIAGTPDFGIWYHKVDDMKLIGYSDSDRAGSLDDRKSTSAYVFTLGSGVISWSSKKQSTV 2375
YI GT DFGIWY V + KL+GY+DSD AG L+DRKSTS Y+F+LGSG + WSSKKQ+
Sbjct: 1082 YIVGTYDFGIWYGHVQEFKLVGYTDSDWAGCLEDRKSTSGYMFSLGSGAVCWSSKKQAVT 1141
Query: 2376 ALSSTEVEYVSLTSAACQAIWLRRLLADFLQVQQEATELYCDNISAIRMTQSPVYHGRTK 2555
ALSS+E EY + TS+ACQA+WLRR+LAD Q +E T +YCDN +AI MT++P YHGRTK
Sbjct: 1142 ALSSSEAEYTAATSSACQAVWLRRILADINQEHEEPTVIYCDNKAAIAMTKNPAYHGRTK 1201
Query: 2556 HIEIRHHFIRELVENGQITVTFCGT 2630
H++IR HFIR+LV G + GT
Sbjct: 1202 HVDIRVHFIRDLVVEGYADIVVDGT 1226
>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
Length = 1274
Score = 352 bits (903), Expect(2) = e-158
Identities = 182/305 (59%), Positives = 213/305 (69%)
Frame = +1
Query: 1276 NFPWELVDLPEGKNAIGLKWVFRTKYHADGSIQKQKARLVAKGYAQEHGVDYDETFAPVA 1455
N WELV+LPE KN IG+KWVFRTKY ADGSIQK KARLVAKGYAQ+HGVDYD+TF+PVA
Sbjct: 834 NETWELVELPEDKNVIGVKWVFRTKYLADGSIQKHKARLVAKGYAQQHGVDYDDTFSPVA 893
Query: 1456 RFETVRTFLALAAQLGWPVFQFDVKSAFLNGDLKEEVYVVQPEGFIVPGAEKKVYRLRKA 1635
RFET PEGFIVP E+ VYRL+KA
Sbjct: 894 RFET-------------------------------------PEGFIVPSKEEHVYRLKKA 916
Query: 1636 LYGLKQASHEWYKKIDSYFLENNFERSDNEPTLYLKRQGTDFFVVCLYVDDMIYMGSCEP 1815
LYGLKQA WY KIDSYF+EN F+RS +EP LYLKRQ DDMIYMGS
Sbjct: 917 LYGLKQAPRAWYSKIDSYFVENGFKRSKSEPNLYLKRQ-----------DDMIYMGSSSX 965
Query: 1816 IVAEFKSSMRKQFEMSDLGLLHYFLGLEVKQGIDGIFISQQKFAEDLLKKFHVTGSTAAS 1995
++ EFK+ M+K+FEMS LGLLH FLGLEVKQ DG+F+SQ+K+A DLLKKF++ +
Sbjct: 966 LINEFKACMKKKFEMSXLGLLHXFLGLEVKQVEDGVFVSQRKYAVDLLKKFNMLNCKVVA 1025
Query: 1996 TPMNINEKLSSNDGTGAANANLYRSMVGGLNYLSHTRPDIAHSVGIVSRFMHNPSKHHLG 2175
TPMN NEKL + DGT A+A +RS+VGGL YL+HTRPDIA +VG++SRFMH PSK HLG
Sbjct: 1026 TPMNSNEKLQAEDGTERADARRFRSLVGGLIYLTHTRPDIAFAVGVISRFMHCPSKQHLG 1085
Query: 2176 AVKRI 2190
A KR+
Sbjct: 1086 AAKRL 1090
Score = 237 bits (605), Expect(2) = e-158
Identities = 109/180 (60%), Positives = 140/180 (77%)
Frame = +3
Query: 2196 YIAGTPDFGIWYHKVDDMKLIGYSDSDRAGSLDDRKSTSAYVFTLGSGVISWSSKKQSTV 2375
YIAGT DFGIWY V + KL+GY+DSD AG L+DRKS S Y+F+LGSG + WSSKKQ+
Sbjct: 1093 YIAGTYDFGIWYGHVQEFKLVGYTDSDWAGCLEDRKSXSGYMFSLGSGAVCWSSKKQAVT 1152
Query: 2376 ALSSTEVEYVSLTSAACQAIWLRRLLADFLQVQQEATELYCDNISAIRMTQSPVYHGRTK 2555
ALSS E EY + TS+ CQA+WLRR+LAD Q +E T +YCDN +AI MT++P YHGRTK
Sbjct: 1153 ALSSXEAEYTAATSSXCQAVWLRRILADINQEHEEPTVIYCDNKAAIAMTKNPAYHGRTK 1212
Query: 2556 HIEIRHHFIRELVENGQITVTFCGTNQQMADIPTKSLASGK*EYFRKQMGVCNFESRGYV 2735
H++IR HFIR+LV G++ + +C TN+Q+AD+ TK+L+ K YFR ++GVCNFESRG V
Sbjct: 1213 HVDIRVHFIRDLVVEGKVVLQYCNTNEQVADVLTKALSRDKHVYFRSKLGVCNFESRGSV 1272