BLASTX nr result

ID: Cnidium21_contig00000488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000488
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACX54226.1| chlorophyll A/B binding protein [Jatropha curcas]      217   7e-55
ref|XP_002531690.1| chlorophyll A/B binding protein, putative [R...   217   7e-55
dbj|BAE46383.1| chlorophyll a/b binding protein [Panax ginseng]       217   9e-55
ref|XP_002271687.1| PREDICTED: chlorophyll a-b binding protein 1...   216   1e-54
sp|P12062.1|CB26_PETSP RecName: Full=Chlorophyll a-b binding pro...   215   3e-54

>gb|ACX54226.1| chlorophyll A/B binding protein [Jatropha curcas]
          Length = 261

 Score =  217 bits (553), Expect = 7e-55
 Identities = 102/109 (93%), Positives = 105/109 (96%)
 Frame = +3

Query: 84  MATSAIQNSAFAGQTALKSQNELVRKIGNLGGGRITMRRTVKSAPESIWYGPDRPKYLGP 263
           MATSAIQ SAFAGQTALK  NELVRK+G+ GGGRITMRRTVKSAP+SIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKQSNELVRKVGSFGGGRITMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 264 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGA 410
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGA
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGA 109


>ref|XP_002531690.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223528666|gb|EEF30681.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 265

 Score =  217 bits (553), Expect = 7e-55
 Identities = 102/109 (93%), Positives = 106/109 (97%)
 Frame = +3

Query: 84  MATSAIQNSAFAGQTALKSQNELVRKIGNLGGGRITMRRTVKSAPESIWYGPDRPKYLGP 263
           MATSAIQ SAFAGQTALK  NELVRK+G++GGGRITMRRTVKSAP+SIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKPSNELVRKVGSVGGGRITMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 264 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGA 410
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGA
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGA 109


>dbj|BAE46383.1| chlorophyll a/b binding protein [Panax ginseng]
          Length = 265

 Score =  217 bits (552), Expect = 9e-55
 Identities = 104/109 (95%), Positives = 106/109 (97%)
 Frame = +3

Query: 84  MATSAIQNSAFAGQTALKSQNELVRKIGNLGGGRITMRRTVKSAPESIWYGPDRPKYLGP 263
           MATSAIQ SAFAGQTALK QNELVRKIG+LGGGRITMRRTV+SAPESIWYGPDRPKYLGP
Sbjct: 1   MATSAIQRSAFAGQTALKPQNELVRKIGSLGGGRITMRRTVRSAPESIWYGPDRPKYLGP 60

Query: 264 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGA 410
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGA
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGA 109


>ref|XP_002271687.1| PREDICTED: chlorophyll a-b binding protein 151, chloroplastic
           [Vitis vinifera] gi|147794485|emb|CAN71610.1|
           hypothetical protein VITISV_000630 [Vitis vinifera]
          Length = 265

 Score =  216 bits (551), Expect = 1e-54
 Identities = 102/109 (93%), Positives = 104/109 (95%)
 Frame = +3

Query: 84  MATSAIQNSAFAGQTALKSQNELVRKIGNLGGGRITMRRTVKSAPESIWYGPDRPKYLGP 263
           MATSAIQ SAFAGQTALK  NELVRK+G LGGGRITMRRTVKS P+SIWYGPDRPKYLGP
Sbjct: 1   MATSAIQRSAFAGQTALKQPNELVRKVGGLGGGRITMRRTVKSTPQSIWYGPDRPKYLGP 60

Query: 264 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGA 410
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGA
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGA 109


>sp|P12062.1|CB26_PETSP RecName: Full=Chlorophyll a-b binding protein 37, chloroplastic;
           AltName: Full=LHCII type I CAB-37; Short=LHCP; Flags:
           Precursor gi|20512|emb|CAA28639.1| chlorophyll a/b
           binding protein [Petunia x hybrida]
          Length = 265

 Score =  215 bits (547), Expect = 3e-54
 Identities = 102/109 (93%), Positives = 105/109 (96%)
 Frame = +3

Query: 84  MATSAIQNSAFAGQTALKSQNELVRKIGNLGGGRITMRRTVKSAPESIWYGPDRPKYLGP 263
           MATSAIQ SAFAGQTALKSQNELVRKIG+ GGGR TMRRTVKSAP+SIWYG DRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGP 60

Query: 264 FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGA 410
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGA
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGA 109


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