BLASTX nr result
ID: Cnidium21_contig00000483
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00000483 (564 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAR10886.1| chlorophyll a/b binding protein [Trifolium pratense] 244 3e-84 emb|CAA48410.1| light harvesting chlorophyll a /b binding protei... 245 3e-84 gb|AAA33396.1| light-harvesting chlorophyll a/b protein precurso... 243 4e-84 ref|XP_003561119.1| PREDICTED: chlorophyll a-b binding protein 3... 243 4e-84 ref|XP_003561122.1| PREDICTED: chlorophyll a-b binding protein 3... 243 4e-84 >gb|AAR10886.1| chlorophyll a/b binding protein [Trifolium pratense] Length = 266 Score = 244 bits (623), Expect(2) = 3e-84 Identities = 117/121 (96%), Positives = 121/121 (100%) Frame = -2 Query: 563 SRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIW 384 SRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIW Sbjct: 103 SRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIW 162 Query: 383 ATQVILMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAM 204 ATQVILMGAVEGYR+AGGPLGE+VDPLYPGGSFDPLGLA+DPEAFAELKVKELKNGRLAM Sbjct: 163 ATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAM 222 Query: 203 F 201 F Sbjct: 223 F 223 Score = 93.6 bits (231), Expect(2) = 3e-84 Identities = 43/43 (100%), Positives = 43/43 (100%) Frame = -1 Query: 132 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 4 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK Sbjct: 224 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266 >emb|CAA48410.1| light harvesting chlorophyll a /b binding protein [Hedera helix] Length = 193 Score = 245 bits (626), Expect(2) = 3e-84 Identities = 118/121 (97%), Positives = 121/121 (100%) Frame = -2 Query: 563 SRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIW 384 SRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSLVHAQSILAIW Sbjct: 30 SRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIW 89 Query: 383 ATQVILMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAM 204 ATQVILMGAVEGYR+AGGPLGE+VDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAM Sbjct: 90 ATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAM 149 Query: 203 F 201 F Sbjct: 150 F 150 Score = 92.4 bits (228), Expect(2) = 3e-84 Identities = 42/43 (97%), Positives = 43/43 (100%) Frame = -1 Query: 132 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 4 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWA+ATNFVPGK Sbjct: 151 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 193 >gb|AAA33396.1| light-harvesting chlorophyll a/b protein precursor [Lemna gibba] Length = 266 Score = 243 bits (621), Expect(2) = 4e-84 Identities = 116/121 (95%), Positives = 121/121 (100%) Frame = -2 Query: 563 SRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIW 384 +RWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIW Sbjct: 103 ARWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIW 162 Query: 383 ATQVILMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAM 204 ATQV+LMGAVEGYRVAGGPLGE+VDPLYPGGSFDPLGLA+DPEAFAELKVKE+KNGRLAM Sbjct: 163 ATQVVLMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAM 222 Query: 203 F 201 F Sbjct: 223 F 223 Score = 93.6 bits (231), Expect(2) = 4e-84 Identities = 43/43 (100%), Positives = 43/43 (100%) Frame = -1 Query: 132 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 4 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK Sbjct: 224 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266 >ref|XP_003561119.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like isoform 1 [Brachypodium distachyon] gi|357118766|ref|XP_003561120.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like isoform 2 [Brachypodium distachyon] gi|357118768|ref|XP_003561121.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like isoform 3 [Brachypodium distachyon] Length = 266 Score = 243 bits (621), Expect(2) = 4e-84 Identities = 118/121 (97%), Positives = 120/121 (99%) Frame = -2 Query: 563 SRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIW 384 SRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIW Sbjct: 103 SRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIW 162 Query: 383 ATQVILMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAM 204 A QV+LMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLA+DPEAFAELKVKELKNGRLAM Sbjct: 163 ACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAM 222 Query: 203 F 201 F Sbjct: 223 F 223 Score = 93.6 bits (231), Expect(2) = 4e-84 Identities = 43/43 (100%), Positives = 43/43 (100%) Frame = -1 Query: 132 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 4 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK Sbjct: 224 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266 >ref|XP_003561122.1| PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like isoform 4 [Brachypodium distachyon] Length = 233 Score = 243 bits (621), Expect(2) = 4e-84 Identities = 118/121 (97%), Positives = 120/121 (99%) Frame = -2 Query: 563 SRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIW 384 SRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIW Sbjct: 70 SRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIW 129 Query: 383 ATQVILMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLAEDPEAFAELKVKELKNGRLAM 204 A QV+LMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLA+DPEAFAELKVKELKNGRLAM Sbjct: 130 ACQVVLMGAVEGYRVAGGPLGEIVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAM 189 Query: 203 F 201 F Sbjct: 190 F 190 Score = 93.6 bits (231), Expect(2) = 4e-84 Identities = 43/43 (100%), Positives = 43/43 (100%) Frame = -1 Query: 132 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 4 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK Sbjct: 191 SMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 233