BLASTX nr result

ID: Cnidium21_contig00000470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000470
         (792 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511882.1| Chromo domain protein, putative [Ricinus com...   162   1e-37
ref|XP_002301364.1| chromatin remodeling complex subunit [Populu...   160   2e-37
ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [...   157   2e-36
emb|CAN74059.1| hypothetical protein VITISV_024679 [Vitis vinifera]   157   2e-36
ref|XP_003548671.1| PREDICTED: ATP-dependent helicase BRM-like [...   150   2e-34

>ref|XP_002511882.1| Chromo domain protein, putative [Ricinus communis]
            gi|223549062|gb|EEF50551.1| Chromo domain protein,
            putative [Ricinus communis]
          Length = 2248

 Score =  162 bits (409), Expect = 1e-37
 Identities = 90/160 (56%), Positives = 112/160 (70%), Gaps = 6/160 (3%)
 Frame = +3

Query: 3    NEVDLDHSHSQKPLSRVSHTS-EDTRTRTHMPQRETRFGS-SNSNKESGQHEDSRLFAHP 176
            NEV+ D+  + KP+ R S  S +DTR + H+P +ETR G+ S S +E  Q +DS L  HP
Sbjct: 2092 NEVEPDNGSAHKPIQRGSIPSGDDTRVKVHLP-KETRHGTGSGSTREQYQQDDSPL--HP 2148

Query: 177  GELVICKKKRKDREKSVVKSGNGSASQVSPASVGR-IRSPGSGSVSKDTRLVQQTSQQQG 353
            GELVICKKKRKDR+KS+ KS  GS+  VSP S+ R I SP  GS S++TR+ QQ   QQG
Sbjct: 2149 GELVICKKKRKDRDKSMAKSRPGSSGPVSPPSMARTITSPVQGSASRETRMSQQNPHQQG 2208

Query: 354  WTNSPQQASDSRSGG---IGWANPVKRMRTDTGKRRPSQL 464
            W N PQ A++ R GG   +GWANPVKR+RTD GKRRPS L
Sbjct: 2209 WGNQPQPANNGRGGGGGSVGWANPVKRLRTDAGKRRPSHL 2248


>ref|XP_002301364.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222843090|gb|EEE80637.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2222

 Score =  160 bits (406), Expect = 2e-37
 Identities = 87/156 (55%), Positives = 109/156 (69%), Gaps = 2/156 (1%)
 Frame = +3

Query: 3    NEVDLDHSHSQKPLSRVSHTSEDTRTRTHMPQRETRFGS-SNSNKESGQHEDSRLFAHPG 179
            N+V+ D+S + KP+ R S  + D   R H+PQ+ETR GS S S++E    +DS L  HPG
Sbjct: 2070 NDVEPDNSTTHKPMQRGSIPTGDDTRRVHVPQKETRLGSGSGSSREQYPQDDSPL--HPG 2127

Query: 180  ELVICKKKRKDREKSVVKSGNGSASQVSPASVGR-IRSPGSGSVSKDTRLVQQTSQQQGW 356
            ELVICKKKRKDR+KSVV+S  GS+  VSP S+GR I SP   S+ KD R  QQ + QQGW
Sbjct: 2128 ELVICKKKRKDRDKSVVRSRTGSSGPVSPPSMGRNITSPILSSIPKDARPNQQNTHQQGW 2187

Query: 357  TNSPQQASDSRSGGIGWANPVKRMRTDTGKRRPSQL 464
             N P Q ++  +G +GWANPVKR+RTD GKRRPS L
Sbjct: 2188 VNQP-QPTNGGAGSVGWANPVKRLRTDAGKRRPSHL 2222


>ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [Vitis vinifera]
          Length = 2263

 Score =  157 bits (398), Expect = 2e-36
 Identities = 88/166 (53%), Positives = 108/166 (65%), Gaps = 12/166 (7%)
 Frame = +3

Query: 3    NEVDLDHSHSQKPLSR--------VSHTSEDTRTRTHMPQRETRFGSSNSNKESGQHEDS 158
            NEV+ D S   K L R         +  SEDTR ++H+ Q+E+R GSS+S  +    +DS
Sbjct: 2102 NEVEPDPSPPPKQLLRGAAAAAAAAAAASEDTRAKSHISQKESRLGSSSSRDQ----DDS 2157

Query: 159  RLFAHPGELVICKKKRKDREKSVVKSGNGSASQVSPASVGR-IRSPGSGSVSKDTRLVQQ 335
             L  HPG+LVI KKKRKDREKS  K  +GS+  VSP S+GR IRSPG GS+ KD R  QQ
Sbjct: 2158 PLLTHPGDLVISKKKRKDREKSAAKPRSGSSGPVSPPSMGRSIRSPGPGSMQKDGRSTQQ 2217

Query: 336  TSQQQGWTNSPQQASDSRSGG---IGWANPVKRMRTDTGKRRPSQL 464
             + QQ W + P Q ++  SGG   +GWANPVKRMRTD GKRRPS L
Sbjct: 2218 ATHQQAWASQPAQQANGGSGGGGTVGWANPVKRMRTDAGKRRPSHL 2263


>emb|CAN74059.1| hypothetical protein VITISV_024679 [Vitis vinifera]
          Length = 2238

 Score =  157 bits (398), Expect = 2e-36
 Identities = 88/166 (53%), Positives = 108/166 (65%), Gaps = 12/166 (7%)
 Frame = +3

Query: 3    NEVDLDHSHSQKPLSR--------VSHTSEDTRTRTHMPQRETRFGSSNSNKESGQHEDS 158
            NEV+ D S   K L R         +  SEDTR ++H+ Q+E+R GSS+S  +    +DS
Sbjct: 2077 NEVEPDPSPPPKQLLRGAAAAAAAAAAASEDTRAKSHISQKESRLGSSSSRDQ----DDS 2132

Query: 159  RLFAHPGELVICKKKRKDREKSVVKSGNGSASQVSPASVGR-IRSPGSGSVSKDTRLVQQ 335
             L  HPG+LVI KKKRKDREKS  K  +GS+  VSP S+GR IRSPG GS+ KD R  QQ
Sbjct: 2133 PLLTHPGDLVISKKKRKDREKSAAKPRSGSSGPVSPPSMGRSIRSPGPGSMQKDGRSTQQ 2192

Query: 336  TSQQQGWTNSPQQASDSRSGG---IGWANPVKRMRTDTGKRRPSQL 464
             + QQ W + P Q ++  SGG   +GWANPVKRMRTD GKRRPS L
Sbjct: 2193 ATHQQAWASQPAQQANGGSGGGGTVGWANPVKRMRTDAGKRRPSHL 2238


>ref|XP_003548671.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2229

 Score =  150 bits (380), Expect = 2e-34
 Identities = 81/154 (52%), Positives = 101/154 (65%), Gaps = 2/154 (1%)
 Frame = +3

Query: 3    NEVDLDHSHSQKPLSRVSHTS-EDTRTRTHMPQRETRFGSSN-SNKESGQHEDSRLFAHP 176
            NE++ +   SQ+ L R S +S E+ R + H+PQRE+R GS   S+    Q EDS L AHP
Sbjct: 2080 NEMETESYPSQRSLQRGSASSGENNRIKVHLPQRESRTGSGGGSSTREQQQEDSSLLAHP 2139

Query: 177  GELVICKKKRKDREKSVVKSGNGSASQVSPASVGRIRSPGSGSVSKDTRLVQQTSQQQGW 356
            GELV+CKK+R DREKS VK   G    VSP+S+   R+PG  SV K+ RL QQ S  QGW
Sbjct: 2140 GELVVCKKRRNDREKSAVKPKTGP---VSPSSM---RTPGPSSVPKEARLTQQGSHAQGW 2193

Query: 357  TNSPQQASDSRSGGIGWANPVKRMRTDTGKRRPS 458
               P Q  +   G +GWANPVKR+RTD+GKRRPS
Sbjct: 2194 AGQPSQQPNGSGGSVGWANPVKRLRTDSGKRRPS 2227


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