BLASTX nr result

ID: Cnidium21_contig00000463 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000463
         (975 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34146.3| unnamed protein product [Vitis vinifera]              107   6e-21
ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein lig...   107   6e-21
emb|CAN82093.1| hypothetical protein VITISV_031209 [Vitis vinifera]   106   1e-20
ref|XP_003530841.1| PREDICTED: probable E3 ubiquitin-protein lig...   101   3e-20
ref|XP_002510629.1| guanine nucleotide exchange factor P532, put...   100   3e-20

>emb|CBI34146.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  107 bits (266), Expect = 6e-21
 Identities = 52/101 (51%), Positives = 68/101 (67%), Gaps = 6/101 (5%)
 Frame = -2

Query: 713 RELFRQLVEGP*GKPICHVSTSGTHTAGITESGQLYTWGRDEVEXXXXXXXXXXXG---- 546
           REL  ++VEG     I H++T+GTHTA ITESG+LYTWGRD+ +                
Sbjct: 74  RELLPRMVEGSWNAKIRHIATAGTHTAAITESGELYTWGRDQGDGRLGLGPNCGPNEGGG 133

Query: 545 --IPSQVQALPVPLAAVSCAGFFTMWLTEEGEIWNWSGSED 429
             IPS+V+ALPVP+AAVSC GFFTM LT+EG++WNW  + +
Sbjct: 134 LSIPSKVKALPVPVAAVSCGGFFTMVLTQEGQLWNWGANSN 174


>ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
           vinifera]
          Length = 489

 Score =  107 bits (266), Expect = 6e-21
 Identities = 52/101 (51%), Positives = 68/101 (67%), Gaps = 6/101 (5%)
 Frame = -2

Query: 713 RELFRQLVEGP*GKPICHVSTSGTHTAGITESGQLYTWGRDEVEXXXXXXXXXXXG---- 546
           REL  ++VEG     I H++T+GTHTA ITESG+LYTWGRD+ +                
Sbjct: 179 RELLPRMVEGSWNAKIRHIATAGTHTAAITESGELYTWGRDQGDGRLGLGPNCGPNEGGG 238

Query: 545 --IPSQVQALPVPLAAVSCAGFFTMWLTEEGEIWNWSGSED 429
             IPS+V+ALPVP+AAVSC GFFTM LT+EG++WNW  + +
Sbjct: 239 LSIPSKVKALPVPVAAVSCGGFFTMVLTQEGQLWNWGANSN 279


>emb|CAN82093.1| hypothetical protein VITISV_031209 [Vitis vinifera]
          Length = 363

 Score =  106 bits (264), Expect = 1e-20
 Identities = 52/96 (54%), Positives = 66/96 (68%), Gaps = 6/96 (6%)
 Frame = -2

Query: 713 RELFRQLVEGP*GKPICHVSTSGTHTAGITESGQLYTWGRDEVEXXXXXXXXXXXG---- 546
           REL  ++VEG     I H++T+GTHTA ITESG+LYTWGRD+ +                
Sbjct: 162 RELLPRMVEGSWNAKIRHIATAGTHTAAITESGELYTWGRDQGDGRLGLGPNCGPNEGGG 221

Query: 545 --IPSQVQALPVPLAAVSCAGFFTMWLTEEGEIWNW 444
             IPS+V+ALPVP+AAVSC GFFTM LT+EG++WNW
Sbjct: 222 LSIPSKVKALPVPVAAVSCGGFFTMVLTQEGQLWNW 257


>ref|XP_003530841.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 444

 Score =  101 bits (251), Expect(2) = 3e-20
 Identities = 51/101 (50%), Positives = 65/101 (64%), Gaps = 6/101 (5%)
 Frame = -2

Query: 713 RELFRQLVEGP*GKPICHVSTSGTHTAGITESGQLYTWGRDE------VEXXXXXXXXXX 552
           RELF +LV+G     I H++TSGTHTA ITESG+LY WGRDE      +           
Sbjct: 189 RELFPRLVKGSWEGTIKHIATSGTHTAAITESGELYIWGRDEGDGRLGLGPGRGPDHAGG 248

Query: 551 XGIPSQVQALPVPLAAVSCAGFFTMWLTEEGEIWNWSGSED 429
             IPS+V+ LP P+AAVSC GFFTM LT +G++WNW  + +
Sbjct: 249 LSIPSKVKELPYPIAAVSCGGFFTMALTVDGQLWNWGANSN 289



 Score = 24.3 bits (51), Expect(2) = 3e-20
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = -3

Query: 745 GYGGFGALG 719
           GYGGFGALG
Sbjct: 175 GYGGFGALG 183


>ref|XP_002510629.1| guanine nucleotide exchange factor P532, putative [Ricinus
           communis] gi|223551330|gb|EEF52816.1| guanine nucleotide
           exchange factor P532, putative [Ricinus communis]
          Length = 450

 Score =  100 bits (250), Expect(2) = 3e-20
 Identities = 51/101 (50%), Positives = 66/101 (65%), Gaps = 6/101 (5%)
 Frame = -2

Query: 713 RELFRQLVEGP*GKPICHVSTSGTHTAGITESGQLYTWGRDE------VEXXXXXXXXXX 552
           REL  +LV+G   + I H++TSGTHTA ITE+G++YTWGRDE      +           
Sbjct: 195 RELLPRLVQGISNEKIRHIATSGTHTAAITETGEVYTWGRDEGDGRLGLGPGRGPNEGGG 254

Query: 551 XGIPSQVQALPVPLAAVSCAGFFTMWLTEEGEIWNWSGSED 429
             IPS+V+AL VP+AAV C GFFT  LTEEG+IWNW  + +
Sbjct: 255 LSIPSKVKALTVPVAAVFCGGFFTAVLTEEGQIWNWGANSN 295



 Score = 24.3 bits (51), Expect(2) = 3e-20
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = -3

Query: 745 GYGGFGALG 719
           GYGGFGALG
Sbjct: 181 GYGGFGALG 189


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