BLASTX nr result
ID: Cnidium21_contig00000417
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00000417 (1591 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277445.2| PREDICTED: splicing factor U2af small subuni... 286 1e-74 ref|XP_002528581.1| U2 snrnp auxiliary factor, small subunit, pu... 280 1e-72 gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus] 270 6e-70 ref|XP_003540217.1| PREDICTED: splicing factor U2af small subuni... 258 4e-66 ref|XP_004143302.1| PREDICTED: splicing factor U2af small subuni... 250 8e-64 >ref|XP_002277445.2| PREDICTED: splicing factor U2af small subunit B-like [Vitis vinifera] Length = 343 Score = 286 bits (732), Expect = 1e-74 Identities = 153/278 (55%), Positives = 178/278 (64%), Gaps = 18/278 (6%) Frame = +3 Query: 291 PLDPRKIQDHXXXXXXXXXXXXSKYGELESLNICDNLADHMVGNVYAQFREEEHAAAAVQ 470 PLDPRKIQ+H SKYGE+ESLNICDNLADHMVGNVY QFREEEHAA A++ Sbjct: 68 PLDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAANALR 127 Query: 471 SLTGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRQLFGK 650 +L GRFYAGRPIIVDFSPVTDFREATCRQYEEN+CNRGGYCNFMHLKKISRELRRQLFG+ Sbjct: 128 NLNGRFYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNFMHLKKISRELRRQLFGR 187 Query: 651 NXXXXXXXXXXXPQHNRGYDERPH--------------XXXXXXXXXXDYADHRQND-XX 785 N P +RG++E PH D DHR +D Sbjct: 188 NRRRRSRSRSRSPYRHRGHEEHPHGPHGPHGPHGPHGPRGPRGSNRRDDDRDHRYHDRGG 247 Query: 786 XXXXXXXXXXXXXXXXXXXXKRNKSPVREGSAERRAKIEQWNRERDQADTGNKSANNYSN 965 +RNKSPVREGSAERRAKIEQWNRER+QA+ NK+ N++S+ Sbjct: 248 RRPRSRSPARRGGRSRSPGGRRNKSPVREGSAERRAKIEQWNREREQAEATNKNDNSHSD 307 Query: 966 DDRNSDGGNGKQNDQEQYYDP-HQK--RQNGPDDGGYS 1070 N + N + D +QYY+P HQ+ +Q GGY+ Sbjct: 308 ---NGNNNNDFEQDDQQYYNPQHQEEDQQQQQQHGGYN 342 Score = 82.0 bits (201), Expect = 4e-13 Identities = 36/36 (100%), Positives = 36/36 (100%) Frame = +2 Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRL 166 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRL Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRL 36 >ref|XP_002528581.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus communis] gi|223531977|gb|EEF33789.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus communis] Length = 313 Score = 280 bits (715), Expect = 1e-72 Identities = 143/245 (58%), Positives = 164/245 (66%), Gaps = 2/245 (0%) Frame = +3 Query: 294 LDPRKIQDHXXXXXXXXXXXXSKYGELESLNICDNLADHMVGNVYAQFREEEHAAAAVQS 473 LDPRKIQDH SKYG++ESLNICDNLADHMVGNVY QFREE+HAA A+++ Sbjct: 71 LDPRKIQDHFEDFYQDLFEELSKYGDIESLNICDNLADHMVGNVYVQFREEDHAANALRN 130 Query: 474 LTGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRQLFGKN 653 L GRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRR+LFG+N Sbjct: 131 LNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRN 190 Query: 654 XXXXXXXXXXXPQHNRGYDERPHXXXXXXXXXXDYADHRQNDXXXXXXXXXXXXXXXXXX 833 P +RGYDERPH D A H ++ Sbjct: 191 RRRRSRSRSHSPSRHRGYDERPHGGRGFGRRDDDRAHH--HERGRRPRSRSPGRRGGRSR 248 Query: 834 XXXXKRNKS-PVREGSAERRAKIEQWNRERDQADTGNKSANNYSND-DRNSDGGNGKQND 1007 +RN+S PVRE SAERRAKIEQWNRER+Q ++GN+ N ND + N D NG D Sbjct: 249 SPAGRRNRSPPVRESSAERRAKIEQWNREREQTESGNRDGQNLDNDRNSNGDAKNGGHYD 308 Query: 1008 QEQYY 1022 +Q++ Sbjct: 309 DDQHH 313 Score = 82.0 bits (201), Expect = 4e-13 Identities = 36/36 (100%), Positives = 36/36 (100%) Frame = +2 Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRL 166 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRL Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRL 36 >gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus] Length = 310 Score = 270 bits (691), Expect = 6e-70 Identities = 142/249 (57%), Positives = 163/249 (65%) Frame = +3 Query: 291 PLDPRKIQDHXXXXXXXXXXXXSKYGELESLNICDNLADHMVGNVYAQFREEEHAAAAVQ 470 PLDPRKIQ H SKYGE+ESLNICDNLADHMVGNVY QFREEEHA A++ Sbjct: 68 PLDPRKIQQHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEEHAGEALR 127 Query: 471 SLTGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRQLFGK 650 +L+GRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRQLFG+ Sbjct: 128 NLSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRQLFGR 187 Query: 651 NXXXXXXXXXXXPQHNRGYDERPHXXXXXXXXXXDYADHRQNDXXXXXXXXXXXXXXXXX 830 PQ +RG+ +RPH D + R +D Sbjct: 188 YRRRHSRSRSRSPQAHRGHGDRPHGGRGYGRRDDD-RNQRYHD-KGRRPRSRSPGHRGRS 245 Query: 831 XXXXXKRNKSPVREGSAERRAKIEQWNRERDQADTGNKSANNYSNDDRNSDGGNGKQNDQ 1010 +R++SPVRE S ERRAKI QWNRE++QADTGN N+ D + NG Q++ Sbjct: 246 RSPPGRRDRSPVRENSEERRAKIAQWNREKEQADTGNNDVNH----DVTDNHANGFQDNG 301 Query: 1011 EQYYDPHQK 1037 E YYD Q+ Sbjct: 302 EDYYDHPQQ 310 Score = 82.0 bits (201), Expect = 4e-13 Identities = 36/36 (100%), Positives = 36/36 (100%) Frame = +2 Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRL 166 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRL Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRL 36 >ref|XP_003540217.1| PREDICTED: splicing factor U2af small subunit A-like [Glycine max] Length = 315 Score = 258 bits (658), Expect = 4e-66 Identities = 131/243 (53%), Positives = 156/243 (64%), Gaps = 1/243 (0%) Frame = +3 Query: 291 PLDPRKIQDHXXXXXXXXXXXXSKYGELESLNICDNLADHMVGNVYAQFREEEHAAAAVQ 470 P+DPRKIQDH SKYG++ESLN+CDNLADHMVGNVY QFREEEHAA AV+ Sbjct: 68 PIDPRKIQDHFEEFYEDLFDELSKYGDIESLNVCDNLADHMVGNVYVQFREEEHAANAVR 127 Query: 471 SLTGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRQLFGK 650 +LTGRFYAGRPIIVDFSPVTDFREATCRQYEEN CNRGGYCNFMHLK+ISRELRRQLFGK Sbjct: 128 NLTGRFYAGRPIIVDFSPVTDFREATCRQYEENTCNRGGYCNFMHLKRISRELRRQLFGK 187 Query: 651 NXXXXXXXXXXXPQHNRGYDERPHXXXXXXXXXXDYADHRQNDXXXXXXXXXXXXXXXXX 830 + P +R ++ER H D+ H Sbjct: 188 SHGRHSRSRSRSPYRHRSHEERSHRSHSRKYDDRDH-HHESRSRRHRSTSPRHRRGRSRS 246 Query: 831 XXXXXKRNKSPVREGSAERRAKIEQWNRERDQADTGNK-SANNYSNDDRNSDGGNGKQND 1007 +R+ SPVR+GS ERRA+IEQWNRER+ + G K +A +N + + G+ +Q Sbjct: 247 RSPGGRRHHSPVRDGSEERRARIEQWNREREDQEPGYKVNAEEINNGNASKHHGHQQQEQ 306 Query: 1008 QEQ 1016 + Q Sbjct: 307 EPQ 309 Score = 82.0 bits (201), Expect = 4e-13 Identities = 36/36 (100%), Positives = 36/36 (100%) Frame = +2 Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRL 166 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRL Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRL 36 >ref|XP_004143302.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis sativus] Length = 317 Score = 250 bits (638), Expect = 8e-64 Identities = 134/254 (52%), Positives = 156/254 (61%), Gaps = 6/254 (2%) Frame = +3 Query: 294 LDPRKIQDHXXXXXXXXXXXXSKYGELESLNICDNLADHMVGNVYAQFREEEHAAAAVQS 473 LDPRK+QDH SKYG+LESLNICDNLADHMVGNVY QFREEE AA A+ + Sbjct: 69 LDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVGNVYVQFREEEQAANALHN 128 Query: 474 LTGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRQLFGKN 653 L GRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRR+LFG++ Sbjct: 129 LNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISRELRRRLFGRS 188 Query: 654 --XXXXXXXXXXXPQHNRGYDERPHXXXXXXXXXXD----YADHRQNDXXXXXXXXXXXX 815 P + GY+ER H D R +D Sbjct: 189 RRRRSRSRSRSQSPHKHHGYEERSHGGGGGRGRGPSRRDGEKDPRYHDRSRRPRSRSPRH 248 Query: 816 XXXXXXXXXXKRNKSPVREGSAERRAKIEQWNRERDQADTGNKSANNYSNDDRNSDGGNG 995 +RN+SPVRE SAERRAKIEQWNR+R++ D G+ ++ D GG+ Sbjct: 249 RGGRSRSPGGRRNRSPVRESSAERRAKIEQWNRDREKEDNGS------NHQDVKDVGGSN 302 Query: 996 KQNDQEQYYDPHQK 1037 E +DP ++ Sbjct: 303 DLVQNEDEFDPSKQ 316 Score = 82.0 bits (201), Expect = 4e-13 Identities = 36/36 (100%), Positives = 36/36 (100%) Frame = +2 Query: 59 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRL 166 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRL Sbjct: 1 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRL 36