BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00000408
         (1838 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311105.1| predicted protein [Populus trichocarpa] gi|2...   647   0.0  
ref|XP_002277010.1| PREDICTED: 26S proteasome non-ATPase regulat...   640   0.0  
ref|XP_002319533.1| predicted protein [Populus trichocarpa] gi|2...   636   e-180
ref|XP_004143110.1| PREDICTED: 26S proteasome non-ATPase regulat...   636   e-180
ref|XP_003603578.1| 26S proteasome non-ATPase regulatory subunit...   632   e-179

>ref|XP_002311105.1| predicted protein [Populus trichocarpa] gi|222850925|gb|EEE88472.1|
            predicted protein [Populus trichocarpa]
          Length = 422

 Score =  647 bits (1668), Expect = 0.0
 Identities = 340/420 (80%), Positives = 368/420 (87%)
 Frame = -3

Query: 1722 SYLPATTESLXXXXXXXXXXXXXXXLYRVLDDPSSTSEALRIKEQAVSSLSDLLREQSRA 1543
            SYLPATT+S+                YR+L+ PSS+ E+LRIKEQ++++LSDLLR+++RA
Sbjct: 4    SYLPATTDSIAQALEAKNPSESISIFYRILESPSSSPESLRIKEQSITNLSDLLRQENRA 63

Query: 1542 EELRNLLTQLRPFFSKIPKAKTAKIVRGIIDTVAKIPGTSDLQVSLCKEIVEWTRAEKRT 1363
            EELR+LLTQLRPFF+ IPKAKTAKIVRGIID VAKIPGTSDLQ+SLCKE+V+WTRAEKRT
Sbjct: 64   EELRSLLTQLRPFFALIPKAKTAKIVRGIIDAVAKIPGTSDLQISLCKEMVQWTRAEKRT 123

Query: 1362 FLRQRIEARLAALLMESKEYSEALNLLSGLIKEVRRLDDKLLLVEIDLLESKLHFSLRXX 1183
            FLRQR+EARLAALLMESKEYSEALNLLSGLIKEVRRLDDKLLLV+IDLLESKLHFSLR  
Sbjct: 124  FLRQRVEARLAALLMESKEYSEALNLLSGLIKEVRRLDDKLLLVDIDLLESKLHFSLRNL 183

Query: 1182 XXXXXXXXXXXXXXXAIYVPPAQQGVIDLQSGILHAEEKDYKTGYSYXXXXXXXFNALED 1003
                           AIYVPPAQQG IDLQSGILHAEEKDYKTGYSY       FNALED
Sbjct: 184  PKAKAALTAARTAANAIYVPPAQQGTIDLQSGILHAEEKDYKTGYSYFFEAFEAFNALED 243

Query: 1002 PQAVYSLKYMLLCKIMVNQADDVAGIISSQKVGLHYQGPELDAMKAVADAHSKRSLKLFE 823
            P+AV+SLKYMLLCKIMV+QADDVAGIISS K GL Y GPELDAMKAVADAHSKRSLKLFE
Sbjct: 244  PRAVFSLKYMLLCKIMVSQADDVAGIISS-KAGLQYVGPELDAMKAVADAHSKRSLKLFE 302

Query: 822  SALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPFSRVEITHIAELIELPEEHVEK 643
            +ALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPFSRVEI HIA+LIELP +HVEK
Sbjct: 303  TALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPFSRVEIAHIADLIELPIDHVEK 362

Query: 642  KLSQMILDKKFAGTLDQGAGCLVIFDDPKSDAIYPATLETISNVGKVVDSLFTRSAKIMA 463
            KLSQMILDKKFAGTLDQGAGCLVIFDDPK+DAIYPATLETISNVGKVVDSL+ RSAKIMA
Sbjct: 363  KLSQMILDKKFAGTLDQGAGCLVIFDDPKTDAIYPATLETISNVGKVVDSLYVRSAKIMA 422


>ref|XP_002277010.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 11 isoform 2
            [Vitis vinifera] gi|225451257|ref|XP_002276988.1|
            PREDICTED: 26S proteasome non-ATPase regulatory subunit
            11 isoform 1 [Vitis vinifera]
            gi|359487820|ref|XP_003633654.1| PREDICTED: 26S
            proteasome non-ATPase regulatory subunit 11 [Vitis
            vinifera] gi|147811910|emb|CAN63723.1| hypothetical
            protein VITISV_021756 [Vitis vinifera]
          Length = 422

 Score =  640 bits (1652), Expect = 0.0
 Identities = 338/421 (80%), Positives = 368/421 (87%)
 Frame = -3

Query: 1725 ASYLPATTESLXXXXXXXXXXXXXXXLYRVLDDPSSTSEALRIKEQAVSSLSDLLREQSR 1546
            +SYLPATTES+               LYRV+D+PSS+SE+LRIKEQA+++LSDLLR++SR
Sbjct: 3    SSYLPATTESIAQALEAKTPSEAISILYRVIDNPSSSSESLRIKEQAITNLSDLLRQESR 62

Query: 1545 AEELRNLLTQLRPFFSKIPKAKTAKIVRGIIDTVAKIPGTSDLQVSLCKEIVEWTRAEKR 1366
            AEELR+LLTQLRPFFS IPKAKTAKIVRGIID VAKIP TSDLQ+SLCKE+V WTRAEKR
Sbjct: 63   AEELRSLLTQLRPFFSLIPKAKTAKIVRGIIDAVAKIPNTSDLQISLCKEMVAWTRAEKR 122

Query: 1365 TFLRQRIEARLAALLMESKEYSEALNLLSGLIKEVRRLDDKLLLVEIDLLESKLHFSLRX 1186
            TFLRQR+EARLAALLMESKEYSEAL LLSGLIKEVRRLDDKLLLV+IDLLESKLHFSLR 
Sbjct: 123  TFLRQRVEARLAALLMESKEYSEALTLLSGLIKEVRRLDDKLLLVDIDLLESKLHFSLRN 182

Query: 1185 XXXXXXXXXXXXXXXXAIYVPPAQQGVIDLQSGILHAEEKDYKTGYSYXXXXXXXFNALE 1006
                            AIYVPPAQQG IDLQSGILHAEEKDYKT YSY       FNALE
Sbjct: 183  LPKAKAALTAARTAANAIYVPPAQQGTIDLQSGILHAEEKDYKTAYSYFFEAFEAFNALE 242

Query: 1005 DPQAVYSLKYMLLCKIMVNQADDVAGIISSQKVGLHYQGPELDAMKAVADAHSKRSLKLF 826
            +P+AV+SLKYMLLCKIMV+QADDVAGIISS K GL Y GPELDAMKAVADAH+KRSLKLF
Sbjct: 243  EPRAVFSLKYMLLCKIMVSQADDVAGIISS-KAGLQYVGPELDAMKAVADAHAKRSLKLF 301

Query: 825  ESALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPFSRVEITHIAELIELPEEHVE 646
            E+ALR++KAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPFSRVEI HIAELIELP +HVE
Sbjct: 302  ETALRNYKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPFSRVEIAHIAELIELPVDHVE 361

Query: 645  KKLSQMILDKKFAGTLDQGAGCLVIFDDPKSDAIYPATLETISNVGKVVDSLFTRSAKIM 466
            KKLSQMILDKKFAGTLDQGAGCL+IF+DPK+DAIYPATLETISN+GKVVDSL+ RSAKIM
Sbjct: 362  KKLSQMILDKKFAGTLDQGAGCLIIFEDPKTDAIYPATLETISNIGKVVDSLYVRSAKIM 421

Query: 465  A 463
            A
Sbjct: 422  A 422


>ref|XP_002319533.1| predicted protein [Populus trichocarpa] gi|222857909|gb|EEE95456.1|
            predicted protein [Populus trichocarpa]
          Length = 422

 Score =  636 bits (1641), Expect = e-180
 Identities = 335/419 (79%), Positives = 366/419 (87%)
 Frame = -3

Query: 1719 YLPATTESLXXXXXXXXXXXXXXXLYRVLDDPSSTSEALRIKEQAVSSLSDLLREQSRAE 1540
            YLPATT+S+               LYR+L++PSS+ E+LRIKEQA+++LSDLLR+++RAE
Sbjct: 5    YLPATTDSIDQALEAKNPSEGISILYRILENPSSSPESLRIKEQAITNLSDLLRQENRAE 64

Query: 1539 ELRNLLTQLRPFFSKIPKAKTAKIVRGIIDTVAKIPGTSDLQVSLCKEIVEWTRAEKRTF 1360
            ELR+LLT LRPFF+ IPKAKTAKIVRG+ID VAKIPGTSDLQ+SLCKE+V+WTRAEKRTF
Sbjct: 65   ELRSLLTLLRPFFALIPKAKTAKIVRGVIDAVAKIPGTSDLQISLCKEMVQWTRAEKRTF 124

Query: 1359 LRQRIEARLAALLMESKEYSEALNLLSGLIKEVRRLDDKLLLVEIDLLESKLHFSLRXXX 1180
            LRQR+EARLAALLME+KEYSEALNLLSGLIKEVRRLDDKLLLV+IDLLESKLHFSLR   
Sbjct: 125  LRQRVEARLAALLMENKEYSEALNLLSGLIKEVRRLDDKLLLVDIDLLESKLHFSLRNLP 184

Query: 1179 XXXXXXXXXXXXXXAIYVPPAQQGVIDLQSGILHAEEKDYKTGYSYXXXXXXXFNALEDP 1000
                          AIYVPPAQQG IDLQSGILHAEEKDYKT YSY       FNALEDP
Sbjct: 185  KAKAALTAARTAANAIYVPPAQQGTIDLQSGILHAEEKDYKTAYSYFFEAFEAFNALEDP 244

Query: 999  QAVYSLKYMLLCKIMVNQADDVAGIISSQKVGLHYQGPELDAMKAVADAHSKRSLKLFES 820
            +AV+SLKYMLLCKIMV+QADDVAGIISS K GL Y GPELDAMKAVADAH+KRSLKLFE+
Sbjct: 245  RAVFSLKYMLLCKIMVSQADDVAGIISS-KAGLQYVGPELDAMKAVADAHAKRSLKLFET 303

Query: 819  ALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPFSRVEITHIAELIELPEEHVEKK 640
            ALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPFSRVEI HIA+LIEL  +HVEKK
Sbjct: 304  ALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPFSRVEIAHIADLIELSVDHVEKK 363

Query: 639  LSQMILDKKFAGTLDQGAGCLVIFDDPKSDAIYPATLETISNVGKVVDSLFTRSAKIMA 463
            LSQMILDKKFAGTLDQGAGCLVIFDDPK+DAIYPATLETISNVGKVVDSL+ RSAKIMA
Sbjct: 364  LSQMILDKKFAGTLDQGAGCLVIFDDPKTDAIYPATLETISNVGKVVDSLYVRSAKIMA 422


>ref|XP_004143110.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 11-like
            isoform 1 [Cucumis sativus]
            gi|449450722|ref|XP_004143111.1| PREDICTED: 26S
            proteasome non-ATPase regulatory subunit 11-like isoform
            2 [Cucumis sativus] gi|449450724|ref|XP_004143112.1|
            PREDICTED: 26S proteasome non-ATPase regulatory subunit
            11-like isoform 3 [Cucumis sativus]
            gi|449529373|ref|XP_004171674.1| PREDICTED: 26S
            proteasome non-ATPase regulatory subunit 11-like isoform
            1 [Cucumis sativus] gi|449529375|ref|XP_004171675.1|
            PREDICTED: 26S proteasome non-ATPase regulatory subunit
            11-like isoform 2 [Cucumis sativus]
            gi|449529377|ref|XP_004171676.1| PREDICTED: 26S
            proteasome non-ATPase regulatory subunit 11-like isoform
            3 [Cucumis sativus]
          Length = 422

 Score =  636 bits (1640), Expect = e-180
 Identities = 335/420 (79%), Positives = 364/420 (86%)
 Frame = -3

Query: 1722 SYLPATTESLXXXXXXXXXXXXXXXLYRVLDDPSSTSEALRIKEQAVSSLSDLLREQSRA 1543
            SYLPATTES+               LYRVL++PSS+ EALRIKEQA+++LSDLL +++RA
Sbjct: 4    SYLPATTESISEALEAKNSSDSISILYRVLENPSSSPEALRIKEQAITNLSDLLTQENRA 63

Query: 1542 EELRNLLTQLRPFFSKIPKAKTAKIVRGIIDTVAKIPGTSDLQVSLCKEIVEWTRAEKRT 1363
            E+LRNLLTQLRPFF+ IPKAKTAKIVRGIID VAKIP TSDLQ+SLCKE+V+WTRAEKRT
Sbjct: 64   EDLRNLLTQLRPFFNLIPKAKTAKIVRGIIDAVAKIPNTSDLQISLCKEMVQWTRAEKRT 123

Query: 1362 FLRQRIEARLAALLMESKEYSEALNLLSGLIKEVRRLDDKLLLVEIDLLESKLHFSLRXX 1183
            FLRQR+EARLAALLME+KEY EALNLL+GLIKEVRRLDDKLLLV+IDLLESKLHFSLR  
Sbjct: 124  FLRQRVEARLAALLMENKEYPEALNLLTGLIKEVRRLDDKLLLVDIDLLESKLHFSLRNL 183

Query: 1182 XXXXXXXXXXXXXXXAIYVPPAQQGVIDLQSGILHAEEKDYKTGYSYXXXXXXXFNALED 1003
                           AIYVPPAQQG IDLQSGILHAEEKDYKT YSY       FNALED
Sbjct: 184  PKAKAALTAARTAANAIYVPPAQQGTIDLQSGILHAEEKDYKTAYSYFFEAFEAFNALED 243

Query: 1002 PQAVYSLKYMLLCKIMVNQADDVAGIISSQKVGLHYQGPELDAMKAVADAHSKRSLKLFE 823
            P+AV+SLKYMLLCKIMVNQADDVAG + S K GL YQG ELDAMKAVADAHSKRSLKLFE
Sbjct: 244  PRAVFSLKYMLLCKIMVNQADDVAGTVLS-KAGLQYQGNELDAMKAVADAHSKRSLKLFE 302

Query: 822  SALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPFSRVEITHIAELIELPEEHVEK 643
            +ALRD+KAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPFSRVEI HIAELIELP +HVEK
Sbjct: 303  TALRDYKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPFSRVEIAHIAELIELPLDHVEK 362

Query: 642  KLSQMILDKKFAGTLDQGAGCLVIFDDPKSDAIYPATLETISNVGKVVDSLFTRSAKIMA 463
            KLSQMILDKKFAGTLDQGAGCL+IFDDPK+DAIYPATLETISN+GKVVDSL+ RSAKIMA
Sbjct: 363  KLSQMILDKKFAGTLDQGAGCLIIFDDPKTDAIYPATLETISNIGKVVDSLYIRSAKIMA 422


>ref|XP_003603578.1| 26S proteasome non-ATPase regulatory subunit [Medicago truncatula]
            gi|355492626|gb|AES73829.1| 26S proteasome non-ATPase
            regulatory subunit [Medicago truncatula]
          Length = 671

 Score =  632 bits (1630), Expect = e-179
 Identities = 335/439 (76%), Positives = 372/439 (84%)
 Frame = -3

Query: 1779 FALQFSDLIFKDFRKGSMASYLPATTESLXXXXXXXXXXXXXXXLYRVLDDPSSTSEALR 1600
            FAL  + +  K F +    SYLPATT+S+               LYRVLDDPSS+ EALR
Sbjct: 235  FALNGTRIELK-FPEAMSTSYLPATTDSIAQALEAKDTSGAISILYRVLDDPSSSPEALR 293

Query: 1599 IKEQAVSSLSDLLREQSRAEELRNLLTQLRPFFSKIPKAKTAKIVRGIIDTVAKIPGTSD 1420
            +KEQA+++L+DLLR+++R E+LR+LLT LRPFFS IPKAKTAKIVRGIID+VAKIPGTSD
Sbjct: 294  MKEQAITNLTDLLRQENRGEDLRSLLTSLRPFFSLIPKAKTAKIVRGIIDSVAKIPGTSD 353

Query: 1419 LQVSLCKEIVEWTRAEKRTFLRQRIEARLAALLMESKEYSEALNLLSGLIKEVRRLDDKL 1240
            LQ+SLCKE+V+WTRAEKRTFLRQRIEARLAALLME+KEYSEAL LLSGL+KEVRRLDDKL
Sbjct: 354  LQISLCKEMVQWTRAEKRTFLRQRIEARLAALLMETKEYSEALTLLSGLVKEVRRLDDKL 413

Query: 1239 LLVEIDLLESKLHFSLRXXXXXXXXXXXXXXXXXAIYVPPAQQGVIDLQSGILHAEEKDY 1060
            LLV+IDLLESKLHFSLR                 AIYVPPAQQG IDLQSGILHAEEKDY
Sbjct: 414  LLVDIDLLESKLHFSLRNLPKAKAALTAARTAANAIYVPPAQQGAIDLQSGILHAEEKDY 473

Query: 1059 KTGYSYXXXXXXXFNALEDPQAVYSLKYMLLCKIMVNQADDVAGIISSQKVGLHYQGPEL 880
            KT YSY       FNALEDP+A++SLKYMLLCKIMVNQADDV GIISS K GL Y GP+L
Sbjct: 474  KTAYSYFFEAFESFNALEDPKAIFSLKYMLLCKIMVNQADDVGGIISS-KAGLQYVGPDL 532

Query: 879  DAMKAVADAHSKRSLKLFESALRDFKAQLEEDPIVHRHLSSLYDTLLEQNLCRLIEPFSR 700
            DAMKAVADA+SKRSLK FE+AL+D+KAQL EDPIVHRH+SSLYDTLLEQNLCRLIEPFSR
Sbjct: 533  DAMKAVADAYSKRSLKFFETALQDYKAQLGEDPIVHRHISSLYDTLLEQNLCRLIEPFSR 592

Query: 699  VEITHIAELIELPEEHVEKKLSQMILDKKFAGTLDQGAGCLVIFDDPKSDAIYPATLETI 520
            VEI HIAELIELP +HVE+K+SQMILDKKFAGTLDQGAGCLVIFDDPK+DAIYPATLETI
Sbjct: 593  VEIAHIAELIELPIDHVERKMSQMILDKKFAGTLDQGAGCLVIFDDPKTDAIYPATLETI 652

Query: 519  SNVGKVVDSLFTRSAKIMA 463
            SNVGKVVDSL+ RSAKIMA
Sbjct: 653  SNVGKVVDSLYVRSAKIMA 671